data_4ZHC # _model_server_result.job_id ULsUqq82TQ3LCawwdWpuag _model_server_result.datetime_utc '2024-11-08 14:33:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zhc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":202}' # _entry.id 4ZHC # _exptl.entry_id 4ZHC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 555.537 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[bis(2-{[(2,3-dihydroxyphenyl)carbonyl]amino}ethyl)amino]ethyl}-1-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZHC _cell.length_a 114.657 _cell.length_b 114.657 _cell.length_c 119.226 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZHC _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,N 1 1 B,G,H,O 2 1 C,I,J,K,L,M,P 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 76 1_555 A SG CYS 177 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 B SG CYS 78 B CYS 76 1_555 B SG CYS 177 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 C SG CYS 78 C CYS 76 1_555 C SG CYS 177 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? # _chem_comp.formula 'C26 H29 N5 O9' _chem_comp.formula_weight 555.537 _chem_comp.id TC2 _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[bis(2-{[(2,3-dihydroxyphenyl)carbonyl]amino}ethyl)amino]ethyl}-1-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Tren bis-2,3-catecholamido mono-N-hydroxypyridin-2-one-6-amide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 TC2 doub 300 n y C7 C1 TC2 sing 301 n n C1 C2 TC2 sing 302 n y C2 C3 TC2 doub 303 n y C2 O14 TC2 sing 304 n n C4 C3 TC2 sing 305 n y C3 O15 TC2 sing 306 n n C5 C4 TC2 doub 307 n y C4 H4 TC2 sing 308 n n C6 C5 TC2 sing 309 n y C5 H5 TC2 sing 310 n n C6 H6 TC2 sing 311 n n N9 C7 TC2 sing 312 n n C7 O8 TC2 doub 313 n n N9 C10 TC2 sing 314 n n N9 HN9 TC2 sing 315 n n C11 C10 TC2 sing 316 n n C10 H10 TC2 sing 317 n n C10 H10A TC2 sing 318 n n C11 N12 TC2 sing 319 n n C11 H11 TC2 sing 320 n n C11 H11A TC2 sing 321 n n C13 N12 TC2 sing 322 n n N12 C18 TC2 sing 323 n n C13 C16 TC2 sing 324 n n C13 H13 TC2 sing 325 n n C13 H13A TC2 sing 326 n n O14 HO14 TC2 sing 327 n n O15 HO15 TC2 sing 328 n n C16 N17 TC2 sing 329 n n C16 H16 TC2 sing 330 n n C16 H16A TC2 sing 331 n n N17 C31 TC2 sing 332 n n N17 HN17 TC2 sing 333 n n C18 C19 TC2 sing 334 n n C18 H18 TC2 sing 335 n n C18 H18A TC2 sing 336 n n C19 N20 TC2 sing 337 n n C19 H19 TC2 sing 338 n n C19 H19A TC2 sing 339 n n N20 C21 TC2 sing 340 n n N20 HN20 TC2 sing 341 n n O22 C21 TC2 doub 342 n n C21 C23 TC2 sing 343 n n N24 C23 TC2 sing 344 n n C23 C28 TC2 doub 345 n n O29 N24 TC2 sing 346 n n N24 C25 TC2 sing 347 n n O30 C25 TC2 doub 348 n n C25 C26 TC2 sing 349 n n C26 C27 TC2 doub 350 n n C26 H26 TC2 sing 351 n n C28 C27 TC2 sing 352 n n C27 H27 TC2 sing 353 n n C28 H28 TC2 sing 354 n n O29 HO29 TC2 sing 355 n n O32 C31 TC2 doub 356 n n C31 C33 TC2 sing 357 n n C33 C34 TC2 doub 358 n y C33 C38 TC2 sing 359 n y O39 C34 TC2 sing 360 n n C34 C35 TC2 sing 361 n y C35 O40 TC2 sing 362 n n C35 C36 TC2 doub 363 n y C37 C36 TC2 sing 364 n y C36 H36 TC2 sing 365 n n C38 C37 TC2 doub 366 n y C37 H37 TC2 sing 367 n n C38 H38 TC2 sing 368 n n O39 HO39 TC2 sing 369 n n O40 HO40 TC2 sing 370 n n # _atom_sites.entry_id 4ZHC _atom_sites.fract_transf_matrix[1][1] 0.008722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TH A 1 201 200 TH TH . E 3 TC2 A 1 202 300 TC2 trc . F 4 ACT A 1 203 1 ACT ACT . G 2 TH B 1 201 200 TH TH . H 3 TC2 B 1 202 300 TC2 trc . I 2 TH C 1 201 200 TH TH . J 3 TC2 C 1 202 300 TC2 trc . K 5 SO4 C 1 203 1 SO4 SO4 . L 5 SO4 C 1 204 2 SO4 SO4 . M 4 ACT C 1 205 1 ACT ACT . N 6 HOH A 1 301 96 HOH HOH . N 6 HOH A 2 302 84 HOH HOH . N 6 HOH A 3 303 113 HOH HOH . N 6 HOH A 4 304 97 HOH HOH . N 6 HOH A 5 305 6 HOH HOH . N 6 HOH A 6 306 59 HOH HOH . N 6 HOH A 7 307 33 HOH HOH . N 6 HOH A 8 308 85 HOH HOH . N 6 HOH A 9 309 24 HOH HOH . N 6 HOH A 10 310 114 HOH HOH . N 6 HOH A 11 311 104 HOH HOH . N 6 HOH A 12 312 56 HOH HOH . N 6 HOH A 13 313 49 HOH HOH . N 6 HOH A 14 314 62 HOH HOH . N 6 HOH A 15 315 87 HOH HOH . N 6 HOH A 16 316 41 HOH HOH . N 6 HOH A 17 317 36 HOH HOH . N 6 HOH A 18 318 51 HOH HOH . N 6 HOH A 19 319 42 HOH HOH . N 6 HOH A 20 320 55 HOH HOH . N 6 HOH A 21 321 76 HOH HOH . N 6 HOH A 22 322 77 HOH HOH . N 6 HOH A 23 323 27 HOH HOH . N 6 HOH A 24 324 71 HOH HOH . N 6 HOH A 25 325 40 HOH HOH . N 6 HOH A 26 326 1 HOH HOH . N 6 HOH A 27 327 2 HOH HOH . N 6 HOH A 28 328 102 HOH HOH . N 6 HOH A 29 329 29 HOH HOH . N 6 HOH A 30 330 118 HOH HOH . N 6 HOH A 31 331 70 HOH HOH . N 6 HOH A 32 332 16 HOH HOH . N 6 HOH A 33 333 63 HOH HOH . N 6 HOH A 34 334 45 HOH HOH . N 6 HOH A 35 335 69 HOH HOH . N 6 HOH A 36 336 101 HOH HOH . N 6 HOH A 37 337 106 HOH HOH . N 6 HOH A 38 338 98 HOH HOH . N 6 HOH A 39 339 88 HOH HOH . N 6 HOH A 40 340 125 HOH HOH . N 6 HOH A 41 341 53 HOH HOH . N 6 HOH A 42 342 72 HOH HOH . N 6 HOH A 43 343 30 HOH HOH . N 6 HOH A 44 344 100 HOH HOH . N 6 HOH A 45 345 28 HOH HOH . N 6 HOH A 46 346 92 HOH HOH . N 6 HOH A 47 347 127 HOH HOH . N 6 HOH A 48 348 122 HOH HOH . N 6 HOH A 49 349 130 HOH HOH . O 6 HOH B 1 301 93 HOH HOH . O 6 HOH B 2 302 123 HOH HOH . O 6 HOH B 3 303 73 HOH HOH . O 6 HOH B 4 304 78 HOH HOH . O 6 HOH B 5 305 54 HOH HOH . O 6 HOH B 6 306 107 HOH HOH . P 6 HOH C 1 301 110 HOH HOH . P 6 HOH C 2 302 119 HOH HOH . P 6 HOH C 3 303 67 HOH HOH . P 6 HOH C 4 304 34 HOH HOH . P 6 HOH C 5 305 21 HOH HOH . P 6 HOH C 6 306 68 HOH HOH . P 6 HOH C 7 307 15 HOH HOH . P 6 HOH C 8 308 26 HOH HOH . P 6 HOH C 9 309 74 HOH HOH . P 6 HOH C 10 310 3 HOH HOH . P 6 HOH C 11 311 75 HOH HOH . P 6 HOH C 12 312 5 HOH HOH . P 6 HOH C 13 313 86 HOH HOH . P 6 HOH C 14 314 109 HOH HOH . P 6 HOH C 15 315 19 HOH HOH . P 6 HOH C 16 316 89 HOH HOH . P 6 HOH C 17 317 112 HOH HOH . P 6 HOH C 18 318 91 HOH HOH . P 6 HOH C 19 319 9 HOH HOH . P 6 HOH C 20 320 60 HOH HOH . P 6 HOH C 21 321 17 HOH HOH . P 6 HOH C 22 322 13 HOH HOH . P 6 HOH C 23 323 52 HOH HOH . P 6 HOH C 24 324 8 HOH HOH . P 6 HOH C 25 325 108 HOH HOH . P 6 HOH C 26 326 121 HOH HOH . P 6 HOH C 27 327 47 HOH HOH . P 6 HOH C 28 328 46 HOH HOH . P 6 HOH C 29 329 4 HOH HOH . P 6 HOH C 30 330 35 HOH HOH . P 6 HOH C 31 331 117 HOH HOH . P 6 HOH C 32 332 94 HOH HOH . P 6 HOH C 33 333 10 HOH HOH . P 6 HOH C 34 334 37 HOH HOH . P 6 HOH C 35 335 81 HOH HOH . P 6 HOH C 36 336 105 HOH HOH . P 6 HOH C 37 337 32 HOH HOH . P 6 HOH C 38 338 38 HOH HOH . P 6 HOH C 39 339 57 HOH HOH . P 6 HOH C 40 340 83 HOH HOH . P 6 HOH C 41 341 31 HOH HOH . P 6 HOH C 42 342 14 HOH HOH . P 6 HOH C 43 343 103 HOH HOH . P 6 HOH C 44 344 11 HOH HOH . P 6 HOH C 45 345 18 HOH HOH . P 6 HOH C 46 346 48 HOH HOH . P 6 HOH C 47 347 39 HOH HOH . P 6 HOH C 48 348 7 HOH HOH . P 6 HOH C 49 349 111 HOH HOH . P 6 HOH C 50 350 43 HOH HOH . P 6 HOH C 51 351 90 HOH HOH . P 6 HOH C 52 352 95 HOH HOH . P 6 HOH C 53 353 12 HOH HOH . P 6 HOH C 54 354 23 HOH HOH . P 6 HOH C 55 355 64 HOH HOH . P 6 HOH C 56 356 66 HOH HOH . P 6 HOH C 57 357 44 HOH HOH . P 6 HOH C 58 358 99 HOH HOH . P 6 HOH C 59 359 22 HOH HOH . P 6 HOH C 60 360 50 HOH HOH . P 6 HOH C 61 361 20 HOH HOH . P 6 HOH C 62 362 116 HOH HOH . P 6 HOH C 63 363 115 HOH HOH . P 6 HOH C 64 364 65 HOH HOH . P 6 HOH C 65 365 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TC2 . . . J 3 52.684 40.308 43.097 1 33.52 ? C1 TC2 202 C 1 HETATM 2 C C2 TC2 . . . J 3 51.366 39.894 43.136 1 45.53 ? C2 TC2 202 C 1 HETATM 3 C C3 TC2 . . . J 3 50.486 40.438 44.053 1 41.25 ? C3 TC2 202 C 1 HETATM 4 C C4 TC2 . . . J 3 50.931 41.39 44.966 1 32.05 ? C4 TC2 202 C 1 HETATM 5 C C5 TC2 . . . J 3 52.267 41.778 44.95 1 29.81 ? C5 TC2 202 C 1 HETATM 6 C C6 TC2 . . . J 3 53.137 41.237 44.015 1 30.55 ? C6 TC2 202 C 1 HETATM 7 C C7 TC2 . . . J 3 53.636 39.674 42.124 1 40.46 ? C7 TC2 202 C 1 HETATM 8 O O8 TC2 . . . J 3 54.765 40.123 42.01 1 42 ? O8 TC2 202 C 1 HETATM 9 N N9 TC2 . . . J 3 53.22 38.582 41.478 1 60.87 ? N9 TC2 202 C 1 HETATM 10 C C10 TC2 . . . J 3 54.048 37.835 40.549 1 60.49 ? C10 TC2 202 C 1 HETATM 11 C C11 TC2 . . . J 3 53.855 38.34 39.127 1 56.98 ? C11 TC2 202 C 1 HETATM 12 N N12 TC2 . . . J 3 54.545 37.443 38.182 1 66.23 ? N12 TC2 202 C 1 HETATM 13 O O14 TC2 . . . J 3 50.92 38.96 42.256 1 52.17 ? O14 TC2 202 C 1 HETATM 14 O O15 TC2 . . . J 3 49.192 40.019 44.042 1 35.08 ? O15 TC2 202 C 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #