data_4ZHD
#
_model_server_result.job_id            dahlepbGHcwf2RL4MA5p3Q 
_model_server_result.datetime_utc      '2024-11-29 06:16:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zhd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":203}' 
#
_entry.id    4ZHD 
#
_exptl.entry_id    4ZHD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZHD 
_cell.length_a            114.589 
_cell.length_b            114.589 
_cell.length_c            118.781 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZHD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,N 1 1 
B,G,H,O 2 1 
C,I,J,K,L,M,P 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 78 A CYS 76 1_555 A SG CYS 177 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf2 B SG CYS 78 B CYS 76 1_555 B SG CYS 177 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf3 C SG CYS 78 C CYS 76 1_555 C SG CYS 177 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 162 n n 
C1 C2 GOL sing 163 n n 
C1 H11 GOL sing 164 n n 
C1 H12 GOL sing 165 n n 
O1 HO1 GOL sing 166 n n 
C2 O2 GOL sing 167 n n 
C2 C3 GOL sing 168 n n 
C2 H2 GOL sing 169 n n 
O2 HO2 GOL sing 170 n n 
C3 O3 GOL sing 171 n n 
C3 H31 GOL sing 172 n n 
C3 H32 GOL sing 173 n n 
O3 HO3 GOL sing 174 n n 
#
_atom_sites.entry_id                     4ZHD 
_atom_sites.fract_transf_matrix[1][1]    0.008727 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008727 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008419 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 4PU A 1 201 200 4PU PU . 
E 3 4OZ A 1 202 300 4OZ ENT . 
F 4 GOL A 1 203 1 GOL GOL . 
G 2 4PU B 1 201 200 4PU PU . 
H 3 4OZ B 1 202 300 4OZ ENT . 
I 2 4PU C 1 201 200 4PU PU . 
J 3 4OZ C 1 202 300 4OZ ENT . 
K 4 GOL C 1 203 1 GOL GOL . 
L 5 SO4 C 1 204 1 SO4 SO4 . 
M 5 SO4 C 1 205 2 SO4 SO4 . 
N 6 HOH A 1 301 84 HOH HOH . 
N 6 HOH A 2 302 53 HOH HOH . 
N 6 HOH A 3 303 67 HOH HOH . 
N 6 HOH A 4 304 28 HOH HOH . 
N 6 HOH A 5 305 43 HOH HOH . 
N 6 HOH A 6 306 58 HOH HOH . 
N 6 HOH A 7 307 27 HOH HOH . 
N 6 HOH A 8 308 20 HOH HOH . 
N 6 HOH A 9 309 68 HOH HOH . 
N 6 HOH A 10 310 64 HOH HOH . 
N 6 HOH A 11 311 61 HOH HOH . 
N 6 HOH A 12 312 8 HOH HOH . 
N 6 HOH A 13 313 66 HOH HOH . 
N 6 HOH A 14 314 32 HOH HOH . 
N 6 HOH A 15 315 60 HOH HOH . 
N 6 HOH A 16 316 21 HOH HOH . 
N 6 HOH A 17 317 24 HOH HOH . 
N 6 HOH A 18 318 35 HOH HOH . 
N 6 HOH A 19 319 13 HOH HOH . 
N 6 HOH A 20 320 7 HOH HOH . 
N 6 HOH A 21 321 76 HOH HOH . 
N 6 HOH A 22 322 72 HOH HOH . 
N 6 HOH A 23 323 39 HOH HOH . 
N 6 HOH A 24 324 40 HOH HOH . 
N 6 HOH A 25 325 75 HOH HOH . 
N 6 HOH A 26 326 6 HOH HOH . 
N 6 HOH A 27 327 62 HOH HOH . 
N 6 HOH A 28 328 55 HOH HOH . 
N 6 HOH A 29 329 33 HOH HOH . 
N 6 HOH A 30 330 122 HOH HOH . 
N 6 HOH A 31 331 42 HOH HOH . 
N 6 HOH A 32 332 89 HOH HOH . 
O 6 HOH B 1 301 74 HOH HOH . 
O 6 HOH B 2 302 49 HOH HOH . 
O 6 HOH B 3 303 77 HOH HOH . 
O 6 HOH B 4 304 36 HOH HOH . 
O 6 HOH B 5 305 16 HOH HOH . 
O 6 HOH B 6 306 47 HOH HOH . 
O 6 HOH B 7 307 4 HOH HOH . 
O 6 HOH B 8 308 115 HOH HOH . 
P 6 HOH C 1 301 70 HOH HOH . 
P 6 HOH C 2 302 93 HOH HOH . 
P 6 HOH C 3 303 11 HOH HOH . 
P 6 HOH C 4 304 23 HOH HOH . 
P 6 HOH C 5 305 63 HOH HOH . 
P 6 HOH C 6 306 57 HOH HOH . 
P 6 HOH C 7 307 96 HOH HOH . 
P 6 HOH C 8 308 10 HOH HOH . 
P 6 HOH C 9 309 103 HOH HOH . 
P 6 HOH C 10 310 34 HOH HOH . 
P 6 HOH C 11 311 1 HOH HOH . 
P 6 HOH C 12 312 38 HOH HOH . 
P 6 HOH C 13 313 2 HOH HOH . 
P 6 HOH C 14 314 3 HOH HOH . 
P 6 HOH C 15 315 79 HOH HOH . 
P 6 HOH C 16 316 14 HOH HOH . 
P 6 HOH C 17 317 9 HOH HOH . 
P 6 HOH C 18 318 29 HOH HOH . 
P 6 HOH C 19 319 45 HOH HOH . 
P 6 HOH C 20 320 15 HOH HOH . 
P 6 HOH C 21 321 17 HOH HOH . 
P 6 HOH C 22 322 71 HOH HOH . 
P 6 HOH C 23 323 41 HOH HOH . 
P 6 HOH C 24 324 30 HOH HOH . 
P 6 HOH C 25 325 50 HOH HOH . 
P 6 HOH C 26 326 22 HOH HOH . 
P 6 HOH C 27 327 26 HOH HOH . 
P 6 HOH C 28 328 51 HOH HOH . 
P 6 HOH C 29 329 123 HOH HOH . 
P 6 HOH C 30 330 4 HOH HOH . 
P 6 HOH C 31 331 56 HOH HOH . 
P 6 HOH C 32 332 6 HOH HOH . 
P 6 HOH C 33 333 59 HOH HOH . 
P 6 HOH C 34 334 91 HOH HOH . 
P 6 HOH C 35 335 73 HOH HOH . 
P 6 HOH C 36 336 18 HOH HOH . 
P 6 HOH C 37 337 114 HOH HOH . 
P 6 HOH C 38 338 19 HOH HOH . 
P 6 HOH C 39 339 54 HOH HOH . 
P 6 HOH C 40 340 46 HOH HOH . 
P 6 HOH C 41 341 65 HOH HOH . 
P 6 HOH C 42 342 5 HOH HOH . 
P 6 HOH C 43 343 94 HOH HOH . 
P 6 HOH C 44 344 44 HOH HOH . 
P 6 HOH C 45 345 31 HOH HOH . 
P 6 HOH C 46 346 90 HOH HOH . 
P 6 HOH C 47 347 112 HOH HOH . 
P 6 HOH C 48 348 52 HOH HOH . 
P 6 HOH C 49 349 87 HOH HOH . 
P 6 HOH C 50 350 37 HOH HOH . 
P 6 HOH C 51 351 113 HOH HOH . 
P 6 HOH C 52 352 78 HOH HOH . 
P 6 HOH C 53 353 48 HOH HOH . 
P 6 HOH C 54 354 69 HOH HOH . 
P 6 HOH C 55 355 95 HOH HOH . 
P 6 HOH C 56 356 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 33.739 95.227 57.822 1 57.31 ? C1 GOL 203 A 1 
HETATM 2 O O1 GOL . . . F 4 33.441 94.882 56.467 1 54.25 ? O1 GOL 203 A 1 
HETATM 3 C C2 GOL . . . F 4 34.958 94.471 58.316 1 58.39 ? C2 GOL 203 A 1 
HETATM 4 O O2 GOL . . . F 4 36.034 94.665 57.397 1 65.88 ? O2 GOL 203 A 1 
HETATM 5 C C3 GOL . . . F 4 35.337 94.953 59.714 1 71.17 ? C3 GOL 203 A 1 
HETATM 6 O O3 GOL . . . F 4 35.398 93.839 60.615 1 62.81 ? O3 GOL 203 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#