data_4ZHN # _model_server_result.job_id MqPu7KvyJCaGUA3NR-wfeQ _model_server_result.datetime_utc '2024-11-14 04:54:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zhn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4ZHN # _exptl.entry_id 4ZHN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZHN _cell.length_a 41.373 _cell.length_b 41.373 _cell.length_c 116.569 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZHN _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DT 1 B DT 501 1_555 A P MA7 2 B MA7 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? covale ? covale2 A O3' MA7 2 B MA7 502 1_555 A P DT 3 B DT 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? metalc ? metalc1 B NE2 HIS 121 A HIS 131 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc2 B OD1 ASP 123 A ASP 133 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc3 B NE2 HIS 177 A HIS 187 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc4 C CO CO . A CO 301 1_555 D C1 AKG . A AKG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc5 C CO CO . A CO 301 1_555 D O5 AKG . A AKG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc6 C CO CO . A CO 301 1_555 D O2 AKG . A AKG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc7 C CO CO . A CO 301 1_555 F O HOH . A HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZHN _atom_sites.fract_transf_matrix[1][1] 0.02417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO A 1 301 300 CO CO . D 4 AKG A 1 302 400 AKG AKG . E 5 HOH B 1 601 616 HOH HOH . E 5 HOH B 2 602 801 HOH HOH . E 5 HOH B 3 603 693 HOH HOH . E 5 HOH B 4 604 810 HOH HOH . E 5 HOH B 5 605 601 HOH HOH . E 5 HOH B 6 606 686 HOH HOH . E 5 HOH B 7 607 625 HOH HOH . E 5 HOH B 8 608 667 HOH HOH . E 5 HOH B 9 609 668 HOH HOH . E 5 HOH B 10 610 779 HOH HOH . E 5 HOH B 11 611 815 HOH HOH . E 5 HOH B 12 612 751 HOH HOH . F 5 HOH A 1 401 676 HOH HOH . F 5 HOH A 2 402 677 HOH HOH . F 5 HOH A 3 403 805 HOH HOH . F 5 HOH A 4 404 662 HOH HOH . F 5 HOH A 5 405 694 HOH HOH . F 5 HOH A 6 406 791 HOH HOH . F 5 HOH A 7 407 650 HOH HOH . F 5 HOH A 8 408 626 HOH HOH . F 5 HOH A 9 409 782 HOH HOH . F 5 HOH A 10 410 642 HOH HOH . F 5 HOH A 11 411 713 HOH HOH . F 5 HOH A 12 412 726 HOH HOH . F 5 HOH A 13 413 775 HOH HOH . F 5 HOH A 14 414 731 HOH HOH . F 5 HOH A 15 415 659 HOH HOH . F 5 HOH A 16 416 680 HOH HOH . F 5 HOH A 17 417 730 HOH HOH . F 5 HOH A 18 418 820 HOH HOH . F 5 HOH A 19 419 794 HOH HOH . F 5 HOH A 20 420 817 HOH HOH . F 5 HOH A 21 421 711 HOH HOH . F 5 HOH A 22 422 787 HOH HOH . F 5 HOH A 23 423 620 HOH HOH . F 5 HOH A 24 424 666 HOH HOH . F 5 HOH A 25 425 637 HOH HOH . F 5 HOH A 26 426 653 HOH HOH . F 5 HOH A 27 427 619 HOH HOH . F 5 HOH A 28 428 836 HOH HOH . F 5 HOH A 29 429 825 HOH HOH . F 5 HOH A 30 430 718 HOH HOH . F 5 HOH A 31 431 632 HOH HOH . F 5 HOH A 32 432 710 HOH HOH . F 5 HOH A 33 433 656 HOH HOH . F 5 HOH A 34 434 786 HOH HOH . F 5 HOH A 35 435 679 HOH HOH . F 5 HOH A 36 436 643 HOH HOH . F 5 HOH A 37 437 838 HOH HOH . F 5 HOH A 38 438 648 HOH HOH . F 5 HOH A 39 439 704 HOH HOH . F 5 HOH A 40 440 849 HOH HOH . F 5 HOH A 41 441 682 HOH HOH . F 5 HOH A 42 442 615 HOH HOH . F 5 HOH A 43 443 674 HOH HOH . F 5 HOH A 44 444 698 HOH HOH . F 5 HOH A 45 445 618 HOH HOH . F 5 HOH A 46 446 706 HOH HOH . F 5 HOH A 47 447 715 HOH HOH . F 5 HOH A 48 448 602 HOH HOH . F 5 HOH A 49 449 712 HOH HOH . F 5 HOH A 50 450 606 HOH HOH . F 5 HOH A 51 451 792 HOH HOH . F 5 HOH A 52 452 717 HOH HOH . F 5 HOH A 53 453 639 HOH HOH . F 5 HOH A 54 454 812 HOH HOH . F 5 HOH A 55 455 604 HOH HOH . F 5 HOH A 56 456 729 HOH HOH . F 5 HOH A 57 457 837 HOH HOH . F 5 HOH A 58 458 610 HOH HOH . F 5 HOH A 59 459 725 HOH HOH . F 5 HOH A 60 460 672 HOH HOH . F 5 HOH A 61 461 607 HOH HOH . F 5 HOH A 62 462 635 HOH HOH . F 5 HOH A 63 463 721 HOH HOH . F 5 HOH A 64 464 611 HOH HOH . F 5 HOH A 65 465 673 HOH HOH . F 5 HOH A 66 466 696 HOH HOH . F 5 HOH A 67 467 608 HOH HOH . F 5 HOH A 68 468 646 HOH HOH . F 5 HOH A 69 469 804 HOH HOH . F 5 HOH A 70 470 658 HOH HOH . F 5 HOH A 71 471 645 HOH HOH . F 5 HOH A 72 472 663 HOH HOH . F 5 HOH A 73 473 613 HOH HOH . F 5 HOH A 74 474 684 HOH HOH . F 5 HOH A 75 475 701 HOH HOH . F 5 HOH A 76 476 700 HOH HOH . F 5 HOH A 77 477 657 HOH HOH . F 5 HOH A 78 478 702 HOH HOH . F 5 HOH A 79 479 773 HOH HOH . F 5 HOH A 80 480 732 HOH HOH . F 5 HOH A 81 481 784 HOH HOH . F 5 HOH A 82 482 777 HOH HOH . F 5 HOH A 83 483 661 HOH HOH . F 5 HOH A 84 484 691 HOH HOH . F 5 HOH A 85 485 816 HOH HOH . F 5 HOH A 86 486 705 HOH HOH . F 5 HOH A 87 487 622 HOH HOH . F 5 HOH A 88 488 753 HOH HOH . F 5 HOH A 89 489 670 HOH HOH . F 5 HOH A 90 490 835 HOH HOH . F 5 HOH A 91 491 633 HOH HOH . F 5 HOH A 92 492 697 HOH HOH . F 5 HOH A 93 493 621 HOH HOH . F 5 HOH A 94 494 695 HOH HOH . F 5 HOH A 95 495 609 HOH HOH . F 5 HOH A 96 496 844 HOH HOH . F 5 HOH A 97 497 640 HOH HOH . F 5 HOH A 98 498 707 HOH HOH . F 5 HOH A 99 499 612 HOH HOH . F 5 HOH A 100 500 733 HOH HOH . F 5 HOH A 101 501 603 HOH HOH . F 5 HOH A 102 502 689 HOH HOH . F 5 HOH A 103 503 776 HOH HOH . F 5 HOH A 104 504 636 HOH HOH . F 5 HOH A 105 505 807 HOH HOH . F 5 HOH A 106 506 692 HOH HOH . F 5 HOH A 107 507 819 HOH HOH . F 5 HOH A 108 508 649 HOH HOH . F 5 HOH A 109 509 722 HOH HOH . F 5 HOH A 110 510 724 HOH HOH . F 5 HOH A 111 511 623 HOH HOH . F 5 HOH A 112 512 647 HOH HOH . F 5 HOH A 113 513 688 HOH HOH . F 5 HOH A 114 514 651 HOH HOH . F 5 HOH A 115 515 814 HOH HOH . F 5 HOH A 116 516 605 HOH HOH . F 5 HOH A 117 517 796 HOH HOH . F 5 HOH A 118 518 655 HOH HOH . F 5 HOH A 119 519 629 HOH HOH . F 5 HOH A 120 520 699 HOH HOH . F 5 HOH A 121 521 761 HOH HOH . F 5 HOH A 122 522 800 HOH HOH . F 5 HOH A 123 523 614 HOH HOH . F 5 HOH A 124 524 654 HOH HOH . F 5 HOH A 125 525 845 HOH HOH . F 5 HOH A 126 526 634 HOH HOH . F 5 HOH A 127 527 764 HOH HOH . F 5 HOH A 128 528 660 HOH HOH . F 5 HOH A 129 529 678 HOH HOH . F 5 HOH A 130 530 709 HOH HOH . F 5 HOH A 131 531 641 HOH HOH . F 5 HOH A 132 532 772 HOH HOH . F 5 HOH A 133 533 644 HOH HOH . F 5 HOH A 134 534 723 HOH HOH . F 5 HOH A 135 535 768 HOH HOH . F 5 HOH A 136 536 617 HOH HOH . F 5 HOH A 137 537 719 HOH HOH . F 5 HOH A 138 538 671 HOH HOH . F 5 HOH A 139 539 631 HOH HOH . F 5 HOH A 140 540 652 HOH HOH . F 5 HOH A 141 541 675 HOH HOH . F 5 HOH A 142 542 727 HOH HOH . F 5 HOH A 143 543 665 HOH HOH . F 5 HOH A 144 544 766 HOH HOH . F 5 HOH A 145 545 714 HOH HOH . F 5 HOH A 146 546 627 HOH HOH . F 5 HOH A 147 547 797 HOH HOH . F 5 HOH A 148 548 638 HOH HOH . F 5 HOH A 149 549 703 HOH HOH . F 5 HOH A 150 550 628 HOH HOH . F 5 HOH A 151 551 624 HOH HOH . F 5 HOH A 152 552 630 HOH HOH . F 5 HOH A 153 553 690 HOH HOH . F 5 HOH A 154 554 808 HOH HOH . F 5 HOH A 155 555 720 HOH HOH . F 5 HOH A 156 556 831 HOH HOH . F 5 HOH A 157 557 821 HOH HOH . F 5 HOH A 158 558 687 HOH HOH . F 5 HOH A 159 559 774 HOH HOH . F 5 HOH A 160 560 790 HOH HOH . F 5 HOH A 161 561 681 HOH HOH . F 5 HOH A 162 562 669 HOH HOH . F 5 HOH A 163 563 708 HOH HOH . F 5 HOH A 164 564 716 HOH HOH . F 5 HOH A 165 565 664 HOH HOH . F 5 HOH A 166 566 785 HOH HOH . F 5 HOH A 167 567 824 HOH HOH . F 5 HOH A 168 568 818 HOH HOH . F 5 HOH A 169 569 789 HOH HOH . F 5 HOH A 170 570 683 HOH HOH . F 5 HOH A 171 571 728 HOH HOH . F 5 HOH A 172 572 734 HOH HOH . F 5 HOH A 173 573 848 HOH HOH . F 5 HOH A 174 574 795 HOH HOH . F 5 HOH A 175 575 747 HOH HOH . F 5 HOH A 176 576 740 HOH HOH . F 5 HOH A 177 577 822 HOH HOH . F 5 HOH A 178 578 756 HOH HOH . F 5 HOH A 179 579 839 HOH HOH . F 5 HOH A 180 580 826 HOH HOH . F 5 HOH A 181 581 750 HOH HOH . F 5 HOH A 182 582 781 HOH HOH . F 5 HOH A 183 583 735 HOH HOH . F 5 HOH A 184 584 799 HOH HOH . F 5 HOH A 185 585 741 HOH HOH . F 5 HOH A 186 586 736 HOH HOH . F 5 HOH A 187 587 841 HOH HOH . F 5 HOH A 188 588 840 HOH HOH . F 5 HOH A 189 589 811 HOH HOH . F 5 HOH A 190 590 833 HOH HOH . F 5 HOH A 191 591 769 HOH HOH . F 5 HOH A 192 592 765 HOH HOH . F 5 HOH A 193 593 834 HOH HOH . F 5 HOH A 194 594 742 HOH HOH . F 5 HOH A 195 595 842 HOH HOH . F 5 HOH A 196 596 832 HOH HOH . F 5 HOH A 197 597 745 HOH HOH . F 5 HOH A 198 598 759 HOH HOH . F 5 HOH A 199 599 783 HOH HOH . F 5 HOH A 200 600 760 HOH HOH . F 5 HOH A 201 601 829 HOH HOH . F 5 HOH A 202 602 827 HOH HOH . F 5 HOH A 203 603 806 HOH HOH . F 5 HOH A 204 604 746 HOH HOH . F 5 HOH A 205 605 755 HOH HOH . F 5 HOH A 206 606 739 HOH HOH . F 5 HOH A 207 607 828 HOH HOH . F 5 HOH A 208 608 748 HOH HOH . F 5 HOH A 209 609 850 HOH HOH . F 5 HOH A 210 610 744 HOH HOH . F 5 HOH A 211 611 763 HOH HOH . F 5 HOH A 212 612 754 HOH HOH . F 5 HOH A 213 613 846 HOH HOH . F 5 HOH A 214 614 823 HOH HOH . F 5 HOH A 215 615 788 HOH HOH . F 5 HOH A 216 616 778 HOH HOH . F 5 HOH A 217 617 752 HOH HOH . F 5 HOH A 218 618 743 HOH HOH . F 5 HOH A 219 619 798 HOH HOH . F 5 HOH A 220 620 749 HOH HOH . F 5 HOH A 221 621 758 HOH HOH . F 5 HOH A 222 622 685 HOH HOH . F 5 HOH A 223 623 830 HOH HOH . F 5 HOH A 224 624 767 HOH HOH . F 5 HOH A 225 625 847 HOH HOH . F 5 HOH A 226 626 843 HOH HOH . F 5 HOH A 227 627 771 HOH HOH . F 5 HOH A 228 628 780 HOH HOH . F 5 HOH A 229 629 762 HOH HOH . F 5 HOH A 230 630 757 HOH HOH . F 5 HOH A 231 631 738 HOH HOH . F 5 HOH A 232 632 770 HOH HOH . F 5 HOH A 233 633 793 HOH HOH . F 5 HOH A 234 634 802 HOH HOH . F 5 HOH A 235 635 737 HOH HOH . F 5 HOH A 236 636 809 HOH HOH . F 5 HOH A 237 637 803 HOH HOH . F 5 HOH A 238 638 813 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 37.188 _atom_site.Cartn_y 18.95 _atom_site.Cartn_z -5.141 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 7.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #