data_4ZHX
#
_model_server_result.job_id            ywG8uNVcQaNA-jci1ORevA 
_model_server_result.datetime_utc      '2024-11-22 22:42:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zhx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":402}' 
#
_entry.id    4ZHX 
#
_exptl.entry_id    4ZHX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.02 
_cell.angle_gamma         90 
_cell.entry_id            4ZHX 
_cell.length_a            75.95 
_cell.length_b            134.24 
_cell.length_c            141.48 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZHX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,K,L,O,P,S 1 1 
C,D,F,I,J,M,N,Q,R,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 184 A ARG 171 1_555 A N TPO 185 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale2 A C TPO 185 A TPO 172 1_555 A N SER 186 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale3 B C ARG 107 B ARG 107 1_555 B N SEP 108 B SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale4 B C SEP 108 B SEP 108 1_555 B N HIS 109 B HIS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale5 C C ARG 184 C ARG 171 1_555 C N TPO 185 C TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale6 C C TPO 185 C TPO 172 1_555 C N SER 186 C SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale7 D C ARG 107 D ARG 107 1_555 D N SEP 108 D SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale8 D C SEP 108 D SEP 108 1_555 D N HIS 109 D HIS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 85 n n 
P O2P AMP sing 86 n n 
P O3P AMP sing 87 n n 
P O5' AMP sing 88 n n 
O2P HOP2 AMP sing 89 n n 
O3P HOP3 AMP sing 90 n n 
O5' C5' AMP sing 91 n n 
C5' C4' AMP sing 92 n n 
C5' "H5'1" AMP sing 93 n n 
C5' "H5'2" AMP sing 94 n n 
C4' O4' AMP sing 95 n n 
C4' C3' AMP sing 96 n n 
C4' H4' AMP sing 97 n n 
O4' C1' AMP sing 98 n n 
C3' O3' AMP sing 99 n n 
C3' C2' AMP sing 100 n n 
C3' H3' AMP sing 101 n n 
O3' HO3' AMP sing 102 n n 
C2' O2' AMP sing 103 n n 
C2' C1' AMP sing 104 n n 
C2' H2' AMP sing 105 n n 
O2' HO2' AMP sing 106 n n 
C1' N9 AMP sing 107 n n 
C1' H1' AMP sing 108 n n 
N9 C8 AMP sing 109 n y 
N9 C4 AMP sing 110 n y 
C8 N7 AMP doub 111 n y 
C8 H8 AMP sing 112 n n 
N7 C5 AMP sing 113 n y 
C5 C6 AMP sing 114 n y 
C5 C4 AMP doub 115 n y 
C6 N6 AMP sing 116 n n 
C6 N1 AMP doub 117 n y 
N6 HN61 AMP sing 118 n n 
N6 HN62 AMP sing 119 n n 
N1 C2 AMP sing 120 n y 
C2 N3 AMP doub 121 n y 
C2 H2 AMP sing 122 n n 
N3 C4 AMP sing 123 n y 
#
_atom_sites.entry_id                     4ZHX 
_atom_sites.fract_transf_matrix[1][1]    0.013167 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000695 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007449 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007078 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 4O7 A 1 601 1552 4O7 STU . 
H 5 C1V B 1 301 1271 C1V C1V . 
I 4 4O7 C 1 601 1552 4O7 STU . 
J 5 C1V C 1 602 1553 C1V C1V . 
K 6 C2Z E 1 401 5 C2Z C2Z . 
L 6 C2Z E 1 402 6 C2Z C2Z . 
M 7 AMP F 1 401 1325 AMP AMP . 
N 7 AMP F 1 402 1326 AMP AMP . 
O 8 HOH A 1 701 101 HOH HOH . 
O 8 HOH A 2 702 118 HOH HOH . 
O 8 HOH A 3 703 11 HOH HOH . 
O 8 HOH A 4 704 45 HOH HOH . 
O 8 HOH A 5 705 4 HOH HOH . 
O 8 HOH A 6 706 46 HOH HOH . 
O 8 HOH A 7 707 7 HOH HOH . 
O 8 HOH A 8 708 8 HOH HOH . 
O 8 HOH A 9 709 3 HOH HOH . 
O 8 HOH A 10 710 68 HOH HOH . 
O 8 HOH A 11 711 67 HOH HOH . 
O 8 HOH A 12 712 102 HOH HOH . 
O 8 HOH A 13 713 109 HOH HOH . 
O 8 HOH A 14 714 124 HOH HOH . 
O 8 HOH A 15 715 141 HOH HOH . 
O 8 HOH A 16 716 61 HOH HOH . 
O 8 HOH A 17 717 5 HOH HOH . 
O 8 HOH A 18 718 65 HOH HOH . 
O 8 HOH A 19 719 34 HOH HOH . 
O 8 HOH A 20 720 83 HOH HOH . 
O 8 HOH A 21 721 116 HOH HOH . 
O 8 HOH A 22 722 6 HOH HOH . 
O 8 HOH A 23 723 80 HOH HOH . 
O 8 HOH A 24 724 62 HOH HOH . 
O 8 HOH A 25 725 84 HOH HOH . 
O 8 HOH A 26 726 126 HOH HOH . 
O 8 HOH A 27 727 135 HOH HOH . 
O 8 HOH A 28 728 10 HOH HOH . 
P 8 HOH B 1 401 13 HOH HOH . 
P 8 HOH B 2 402 79 HOH HOH . 
P 8 HOH B 3 403 14 HOH HOH . 
P 8 HOH B 4 404 93 HOH HOH . 
P 8 HOH B 5 405 120 HOH HOH . 
P 8 HOH B 6 406 71 HOH HOH . 
P 8 HOH B 7 407 95 HOH HOH . 
P 8 HOH B 8 408 111 HOH HOH . 
P 8 HOH B 9 409 105 HOH HOH . 
P 8 HOH B 10 410 41 HOH HOH . 
P 8 HOH B 11 411 9 HOH HOH . 
P 8 HOH B 12 412 112 HOH HOH . 
P 8 HOH B 13 413 51 HOH HOH . 
Q 8 HOH C 1 701 19 HOH HOH . 
Q 8 HOH C 2 702 37 HOH HOH . 
Q 8 HOH C 3 703 129 HOH HOH . 
Q 8 HOH C 4 704 127 HOH HOH . 
Q 8 HOH C 5 705 16 HOH HOH . 
Q 8 HOH C 6 706 22 HOH HOH . 
Q 8 HOH C 7 707 15 HOH HOH . 
Q 8 HOH C 8 708 72 HOH HOH . 
Q 8 HOH C 9 709 99 HOH HOH . 
Q 8 HOH C 10 710 44 HOH HOH . 
Q 8 HOH C 11 711 104 HOH HOH . 
Q 8 HOH C 12 712 66 HOH HOH . 
Q 8 HOH C 13 713 57 HOH HOH . 
Q 8 HOH C 14 714 108 HOH HOH . 
Q 8 HOH C 15 715 78 HOH HOH . 
Q 8 HOH C 16 716 23 HOH HOH . 
Q 8 HOH C 17 717 89 HOH HOH . 
Q 8 HOH C 18 718 20 HOH HOH . 
Q 8 HOH C 19 719 96 HOH HOH . 
Q 8 HOH C 20 720 106 HOH HOH . 
Q 8 HOH C 21 721 70 HOH HOH . 
Q 8 HOH C 22 722 131 HOH HOH . 
Q 8 HOH C 23 723 17 HOH HOH . 
Q 8 HOH C 24 724 77 HOH HOH . 
Q 8 HOH C 25 725 50 HOH HOH . 
Q 8 HOH C 26 726 119 HOH HOH . 
Q 8 HOH C 27 727 121 HOH HOH . 
Q 8 HOH C 28 728 18 HOH HOH . 
Q 8 HOH C 29 729 76 HOH HOH . 
Q 8 HOH C 30 730 21 HOH HOH . 
Q 8 HOH C 31 731 24 HOH HOH . 
Q 8 HOH C 32 732 81 HOH HOH . 
Q 8 HOH C 33 733 133 HOH HOH . 
R 8 HOH D 1 301 26 HOH HOH . 
R 8 HOH D 2 302 56 HOH HOH . 
R 8 HOH D 3 303 48 HOH HOH . 
R 8 HOH D 4 304 117 HOH HOH . 
R 8 HOH D 5 305 47 HOH HOH . 
R 8 HOH D 6 306 52 HOH HOH . 
R 8 HOH D 7 307 60 HOH HOH . 
R 8 HOH D 8 308 58 HOH HOH . 
R 8 HOH D 9 309 25 HOH HOH . 
R 8 HOH D 10 310 107 HOH HOH . 
R 8 HOH D 11 311 115 HOH HOH . 
R 8 HOH D 12 312 74 HOH HOH . 
R 8 HOH D 13 313 137 HOH HOH . 
R 8 HOH D 14 314 36 HOH HOH . 
R 8 HOH D 15 315 35 HOH HOH . 
R 8 HOH D 16 316 139 HOH HOH . 
S 8 HOH E 1 501 2 HOH HOH . 
S 8 HOH E 2 502 92 HOH HOH . 
S 8 HOH E 3 503 33 HOH HOH . 
S 8 HOH E 4 504 123 HOH HOH . 
S 8 HOH E 5 505 1 HOH HOH . 
S 8 HOH E 6 506 27 HOH HOH . 
S 8 HOH E 7 507 91 HOH HOH . 
S 8 HOH E 8 508 103 HOH HOH . 
S 8 HOH E 9 509 39 HOH HOH . 
S 8 HOH E 10 510 28 HOH HOH . 
S 8 HOH E 11 511 125 HOH HOH . 
S 8 HOH E 12 512 140 HOH HOH . 
S 8 HOH E 13 513 85 HOH HOH . 
S 8 HOH E 14 514 98 HOH HOH . 
S 8 HOH E 15 515 31 HOH HOH . 
S 8 HOH E 16 516 29 HOH HOH . 
S 8 HOH E 17 517 134 HOH HOH . 
S 8 HOH E 18 518 30 HOH HOH . 
S 8 HOH E 19 519 122 HOH HOH . 
S 8 HOH E 20 520 55 HOH HOH . 
S 8 HOH E 21 521 12 HOH HOH . 
S 8 HOH E 22 522 63 HOH HOH . 
S 8 HOH E 23 523 82 HOH HOH . 
S 8 HOH E 24 524 86 HOH HOH . 
S 8 HOH E 25 525 38 HOH HOH . 
S 8 HOH E 26 526 40 HOH HOH . 
T 8 HOH F 1 501 100 HOH HOH . 
T 8 HOH F 2 502 53 HOH HOH . 
T 8 HOH F 3 503 73 HOH HOH . 
T 8 HOH F 4 504 59 HOH HOH . 
T 8 HOH F 5 505 32 HOH HOH . 
T 8 HOH F 6 506 42 HOH HOH . 
T 8 HOH F 7 507 43 HOH HOH . 
T 8 HOH F 8 508 54 HOH HOH . 
T 8 HOH F 9 509 75 HOH HOH . 
T 8 HOH F 10 510 90 HOH HOH . 
T 8 HOH F 11 511 132 HOH HOH . 
T 8 HOH F 12 512 87 HOH HOH . 
T 8 HOH F 13 513 94 HOH HOH . 
T 8 HOH F 14 514 49 HOH HOH . 
T 8 HOH F 15 515 130 HOH HOH . 
T 8 HOH F 16 516 128 HOH HOH . 
T 8 HOH F 17 517 136 HOH HOH . 
T 8 HOH F 18 518 69 HOH HOH . 
T 8 HOH F 19 519 64 HOH HOH . 
T 8 HOH F 20 520 88 HOH HOH . 
T 8 HOH F 21 521 114 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . N 7 110.651 -84.767 38.379 1 61.12 ? P AMP 402 F 1 
HETATM 2 O O1P AMP . . . N 7 110.678 -83.916 37.155 1 60.91 ? O1P AMP 402 F 1 
HETATM 3 O O2P AMP . . . N 7 111.046 -84.021 39.659 1 60.38 ? O2P AMP 402 F 1 
HETATM 4 O O3P AMP . . . N 7 111.526 -86.017 38.269 1 61.08 ? O3P AMP 402 F 1 
HETATM 5 O O5' AMP . . . N 7 109.159 -85.305 38.593 1 62.63 ? O5' AMP 402 F 1 
HETATM 6 C C5' AMP . . . N 7 108.051 -84.626 39.222 1 63.06 ? C5' AMP 402 F 1 
HETATM 7 C C4' AMP . . . N 7 107.032 -85.649 39.669 1 64.24 ? C4' AMP 402 F 1 
HETATM 8 O O4' AMP . . . N 7 106.759 -86.58 38.597 1 64.71 ? O4' AMP 402 F 1 
HETATM 9 C C3' AMP . . . N 7 107.393 -86.49 40.893 1 64.35 ? C3' AMP 402 F 1 
HETATM 10 O O3' AMP . . . N 7 106.277 -86.639 41.766 1 66.05 ? O3' AMP 402 F 1 
HETATM 11 C C2' AMP . . . N 7 107.871 -87.812 40.282 1 64.52 ? C2' AMP 402 F 1 
HETATM 12 O O2' AMP . . . N 7 107.664 -88.929 41.14 1 65.73 ? O2' AMP 402 F 1 
HETATM 13 C C1' AMP . . . N 7 107.01 -87.907 39.02 1 65.31 ? C1' AMP 402 F 1 
HETATM 14 N N9 AMP . . . N 7 107.629 -88.63 37.909 1 65.01 ? N9 AMP 402 F 1 
HETATM 15 C C8 AMP . . . N 7 108.897 -88.466 37.414 1 63.58 ? C8 AMP 402 F 1 
HETATM 16 N N7 AMP . . . N 7 109.178 -89.241 36.395 1 64.05 ? N7 AMP 402 F 1 
HETATM 17 C C5 AMP . . . N 7 108.011 -89.965 36.201 1 65.89 ? C5 AMP 402 F 1 
HETATM 18 C C6 AMP . . . N 7 107.646 -90.944 35.253 1 67.34 ? C6 AMP 402 F 1 
HETATM 19 N N6 AMP . . . N 7 108.469 -91.408 34.31 1 67.31 ? N6 AMP 402 F 1 
HETATM 20 N N1 AMP . . . N 7 106.388 -91.438 35.313 1 69.03 ? N1 AMP 402 F 1 
HETATM 21 C C2 AMP . . . N 7 105.561 -90.985 36.262 1 69.41 ? C2 AMP 402 F 1 
HETATM 22 N N3 AMP . . . N 7 105.795 -90.074 37.212 1 68.26 ? N3 AMP 402 F 1 
HETATM 23 C C4 AMP . . . N 7 107.047 -89.598 37.126 1 66.46 ? C4 AMP 402 F 1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           23 
#