data_4ZHZ # _model_server_result.job_id gW0kaiQYwjHCNAq6OcjHBg _model_server_result.datetime_utc '2024-11-28 05:28:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4ZHZ # _exptl.entry_id 4ZHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 291.687 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(2-chlorobenzyl)-2-hydroxy-3-nitrobenzaldehyde _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZHZ _cell.length_a 66.562 _cell.length_b 66.562 _cell.length_c 129.173 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OD1 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 93 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 108 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id MN _struct_conn.ptnr2_label_comp_id MN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MN _struct_conn.ptnr2_auth_seq_id 303 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.602 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H10 Cl N O4' _chem_comp.formula_weight 291.687 _chem_comp.id 4P8 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(2-chlorobenzyl)-2-hydroxy-3-nitrobenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAH CAB 4P8 sing 1 n n CAH CAI 4P8 sing 2 n n CAC CAB 4P8 doub 3 n y CAC CAD 4P8 sing 4 n y CAB CAA 4P8 sing 5 n y CAD CAE 4P8 doub 6 n y CAA CLG 4P8 sing 7 n n CAA CAF 4P8 doub 8 n y CAE CAF 4P8 sing 9 n y CAI CAK 4P8 doub 10 n y CAI CAJ 4P8 sing 11 n y CAK CAM 4P8 sing 12 n y CAJ CAL 4P8 doub 13 n y CAM CAO 4P8 sing 14 n n CAM CAN 4P8 doub 15 n y CAL CAN 4P8 sing 16 n y CAL NAR 4P8 sing 17 n n CAO OAP 4P8 doub 18 n n OAT NAR 4P8 sing 19 n n CAN OAQ 4P8 sing 20 n n NAR OAS 4P8 doub 21 n n CAO H1 4P8 sing 22 n n CAK H2 4P8 sing 23 n n OAQ H3 4P8 sing 24 n n CAJ H4 4P8 sing 25 n n CAH H5 4P8 sing 26 n n CAH H6 4P8 sing 27 n n CAF H7 4P8 sing 28 n n CAE H8 4P8 sing 29 n n CAD H9 4P8 sing 30 n n CAC H10 4P8 sing 31 n n # _atom_sites.entry_id 4ZHZ _atom_sites.fract_transf_matrix[1][1] 0.015024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4P8 A 1 301 1 4P8 DRG . C 2 4P8 A 1 302 2 4P8 DRG . D 3 MN A 1 303 1 MN MN . E 4 SO4 A 1 304 1 SO4 SO4 . F 5 HOH A 1 401 51 HOH HOH . F 5 HOH A 2 402 20 HOH HOH . F 5 HOH A 3 403 64 HOH HOH . F 5 HOH A 4 404 8 HOH HOH . F 5 HOH A 5 405 33 HOH HOH . F 5 HOH A 6 406 34 HOH HOH . F 5 HOH A 7 407 71 HOH HOH . F 5 HOH A 8 408 62 HOH HOH . F 5 HOH A 9 409 36 HOH HOH . F 5 HOH A 10 410 61 HOH HOH . F 5 HOH A 11 411 9 HOH HOH . F 5 HOH A 12 412 18 HOH HOH . F 5 HOH A 13 413 39 HOH HOH . F 5 HOH A 14 414 63 HOH HOH . F 5 HOH A 15 415 31 HOH HOH . F 5 HOH A 16 416 52 HOH HOH . F 5 HOH A 17 417 30 HOH HOH . F 5 HOH A 18 418 2 HOH HOH . F 5 HOH A 19 419 70 HOH HOH . F 5 HOH A 20 420 68 HOH HOH . F 5 HOH A 21 421 10 HOH HOH . F 5 HOH A 22 422 38 HOH HOH . F 5 HOH A 23 423 67 HOH HOH . F 5 HOH A 24 424 32 HOH HOH . F 5 HOH A 25 425 4 HOH HOH . F 5 HOH A 26 426 7 HOH HOH . F 5 HOH A 27 427 42 HOH HOH . F 5 HOH A 28 428 6 HOH HOH . F 5 HOH A 29 429 13 HOH HOH . F 5 HOH A 30 430 1 HOH HOH . F 5 HOH A 31 431 24 HOH HOH . F 5 HOH A 32 432 66 HOH HOH . F 5 HOH A 33 433 48 HOH HOH . F 5 HOH A 34 434 73 HOH HOH . F 5 HOH A 35 435 69 HOH HOH . F 5 HOH A 36 436 44 HOH HOH . F 5 HOH A 37 437 22 HOH HOH . F 5 HOH A 38 438 3 HOH HOH . F 5 HOH A 39 439 25 HOH HOH . F 5 HOH A 40 440 5 HOH HOH . F 5 HOH A 41 441 65 HOH HOH . F 5 HOH A 42 442 60 HOH HOH . F 5 HOH A 43 443 12 HOH HOH . F 5 HOH A 44 444 14 HOH HOH . F 5 HOH A 45 445 41 HOH HOH . F 5 HOH A 46 446 53 HOH HOH . F 5 HOH A 47 447 59 HOH HOH . F 5 HOH A 48 448 47 HOH HOH . F 5 HOH A 49 449 58 HOH HOH . F 5 HOH A 50 450 40 HOH HOH . F 5 HOH A 51 451 29 HOH HOH . F 5 HOH A 52 452 46 HOH HOH . F 5 HOH A 53 453 28 HOH HOH . F 5 HOH A 54 454 15 HOH HOH . F 5 HOH A 55 455 37 HOH HOH . F 5 HOH A 56 456 19 HOH HOH . F 5 HOH A 57 457 45 HOH HOH . F 5 HOH A 58 458 16 HOH HOH . F 5 HOH A 59 459 72 HOH HOH . F 5 HOH A 60 460 54 HOH HOH . F 5 HOH A 61 461 27 HOH HOH . F 5 HOH A 62 462 35 HOH HOH . F 5 HOH A 63 463 23 HOH HOH . F 5 HOH A 64 464 26 HOH HOH . F 5 HOH A 65 465 11 HOH HOH . F 5 HOH A 66 466 55 HOH HOH . F 5 HOH A 67 467 21 HOH HOH . F 5 HOH A 68 468 43 HOH HOH . F 5 HOH A 69 469 50 HOH HOH . F 5 HOH A 70 470 17 HOH HOH . F 5 HOH A 71 471 57 HOH HOH . F 5 HOH A 72 472 56 HOH HOH . F 5 HOH A 73 473 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAP 4P8 . . . C 2 -4.584 -33.203 21.447 1 63.37 ? OAP 4P8 302 A 1 HETATM 2 C CAO 4P8 . . . C 2 -3.645 -33.103 20.658 1 46.45 ? CAO 4P8 302 A 1 HETATM 3 C CAM 4P8 . . . C 2 -3.531 -33.974 19.583 1 67.37 ? CAM 4P8 302 A 1 HETATM 4 C CAK 4P8 . . . C 2 -2.481 -33.878 18.679 1 62.16 ? CAK 4P8 302 A 1 HETATM 5 C CAN 4P8 . . . C 2 -4.475 -34.963 19.393 1 77.06 ? CAN 4P8 302 A 1 HETATM 6 O OAQ 4P8 . . . C 2 -5.503 -35.055 20.275 1 76.78 ? OAQ 4P8 302 A 1 HETATM 7 C CAL 4P8 . . . C 2 -4.407 -35.855 18.336 1 80.49 ? CAL 4P8 302 A 1 HETATM 8 N NAR 4P8 . . . C 2 -5.381 -36.759 18.265 1 81.37 ? NAR 4P8 302 A 1 HETATM 9 O OAT 4P8 . . . C 2 -6.392 -36.738 19.236 1 69.33 ? OAT 4P8 302 A 1 HETATM 10 O OAS 4P8 . . . C 2 -5.372 -37.696 17.227 1 72.91 ? OAS 4P8 302 A 1 HETATM 11 C CAJ 4P8 . . . C 2 -3.357 -35.764 17.43 1 70.27 ? CAJ 4P8 302 A 1 HETATM 12 C CAI 4P8 . . . C 2 -2.394 -34.766 17.609 1 63.13 ? CAI 4P8 302 A 1 HETATM 13 C CAH 4P8 . . . C 2 -1.328 -34.649 16.727 1 57.96 ? CAH 4P8 302 A 1 HETATM 14 C CAB 4P8 . . . C 2 -0.181 -35.113 17.365 1 79.26 ? CAB 4P8 302 A 1 HETATM 15 C CAA 4P8 . . . C 2 0.841 -34.235 17.714 1 89.11 ? CAA 4P8 302 A 1 HETATM 16 CL CLG 4P8 . . . C 2 0.712 -32.545 17.349 1 89.13 ? CLG 4P8 302 A 1 HETATM 17 C CAF 4P8 . . . C 2 1.975 -34.72 18.358 1 73.47 ? CAF 4P8 302 A 1 HETATM 18 C CAE 4P8 . . . C 2 2.089 -36.074 18.656 1 89.22 ? CAE 4P8 302 A 1 HETATM 19 C CAD 4P8 . . . C 2 1.067 -36.95 18.31 1 78.25 ? CAD 4P8 302 A 1 HETATM 20 C CAC 4P8 . . . C 2 -0.066 -36.467 17.665 1 82.89 ? CAC 4P8 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #