data_4ZIO # _model_server_result.job_id mRMhyYXLvUvhZyLd-MjpJg _model_server_result.datetime_utc '2024-10-19 19:22:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":302}' # _entry.id 4ZIO # _exptl.entry_id 4ZIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZIO _cell.length_a 43.11 _cell.length_b 103.17 _cell.length_c 149.94 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,M 1 1 B,G,H,I,J,N 2 1 C,K,L,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 60 A PHE 65 1_555 A N1 CH6 61 A CH6 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.262 ? covale ? covale2 A C3 CH6 61 A CH6 66 1_555 A N SER 62 A SER 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.254 ? covale ? covale3 A C GLY 135 A GLY 142 1_555 A N HOX 136 A HOX 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C HOX 136 A HOX 143 1_555 A N GLU 137 A GLU 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 B C PHE 60 B PHE 65 1_555 B N1 CH6 61 B CH6 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.284 ? covale ? covale6 B C3 CH6 61 B CH6 66 1_555 B N SER 62 B SER 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.281 ? covale ? covale7 B C GLY 135 B GLY 142 1_555 B N HOX 136 B HOX 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 B C HOX 136 B HOX 143 1_555 B N GLU 137 B GLU 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale9 C C PHE 60 C PHE 65 1_555 C N1 CH6 61 C CH6 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.291 ? covale ? covale10 C C3 CH6 61 C CH6 66 1_555 C N SER 62 C SER 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.251 ? covale ? covale11 C C GLY 135 C GLY 142 1_555 C N HOX 136 C HOX 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale12 C C HOX 136 C HOX 143 1_555 C N GLU 137 C GLU 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZIO _atom_sites.fract_transf_matrix[1][1] 0.023196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 301 302 SO4 SO4 . E 2 SO4 A 1 302 303 SO4 SO4 . F 2 SO4 A 1 303 305 SO4 SO4 . G 2 SO4 B 1 301 301 SO4 SO4 . H 2 SO4 B 1 302 304 SO4 SO4 . I 2 SO4 B 1 303 306 SO4 SO4 . J 2 SO4 B 1 304 308 SO4 SO4 . K 2 SO4 C 1 301 307 SO4 SO4 . L 2 SO4 C 1 302 309 SO4 SO4 . M 3 HOH A 1 401 469 HOH HOH . M 3 HOH A 2 402 499 HOH HOH . M 3 HOH A 3 403 547 HOH HOH . M 3 HOH A 4 404 411 HOH HOH . M 3 HOH A 5 405 457 HOH HOH . M 3 HOH A 6 406 445 HOH HOH . M 3 HOH A 7 407 521 HOH HOH . M 3 HOH A 8 408 454 HOH HOH . M 3 HOH A 9 409 486 HOH HOH . M 3 HOH A 10 410 541 HOH HOH . M 3 HOH A 11 411 422 HOH HOH . M 3 HOH A 12 412 473 HOH HOH . M 3 HOH A 13 413 518 HOH HOH . M 3 HOH A 14 414 431 HOH HOH . M 3 HOH A 15 415 425 HOH HOH . M 3 HOH A 16 416 496 HOH HOH . M 3 HOH A 17 417 548 HOH HOH . M 3 HOH A 18 418 586 HOH HOH . M 3 HOH A 19 419 467 HOH HOH . M 3 HOH A 20 420 462 HOH HOH . M 3 HOH A 21 421 427 HOH HOH . M 3 HOH A 22 422 409 HOH HOH . M 3 HOH A 23 423 561 HOH HOH . M 3 HOH A 24 424 558 HOH HOH . M 3 HOH A 25 425 439 HOH HOH . M 3 HOH A 26 426 501 HOH HOH . M 3 HOH A 27 427 402 HOH HOH . M 3 HOH A 28 428 563 HOH HOH . M 3 HOH A 29 429 576 HOH HOH . M 3 HOH A 30 430 410 HOH HOH . M 3 HOH A 31 431 545 HOH HOH . M 3 HOH A 32 432 490 HOH HOH . M 3 HOH A 33 433 559 HOH HOH . M 3 HOH A 34 434 435 HOH HOH . M 3 HOH A 35 435 482 HOH HOH . M 3 HOH A 36 436 593 HOH HOH . M 3 HOH A 37 437 466 HOH HOH . M 3 HOH A 38 438 584 HOH HOH . M 3 HOH A 39 439 590 HOH HOH . M 3 HOH A 40 440 481 HOH HOH . M 3 HOH A 41 441 424 HOH HOH . M 3 HOH A 42 442 460 HOH HOH . M 3 HOH A 43 443 475 HOH HOH . M 3 HOH A 44 444 592 HOH HOH . M 3 HOH A 45 445 546 HOH HOH . M 3 HOH A 46 446 534 HOH HOH . M 3 HOH A 47 447 508 HOH HOH . M 3 HOH A 48 448 517 HOH HOH . M 3 HOH A 49 449 416 HOH HOH . M 3 HOH A 50 450 438 HOH HOH . M 3 HOH A 51 451 579 HOH HOH . M 3 HOH A 52 452 440 HOH HOH . M 3 HOH A 53 453 568 HOH HOH . M 3 HOH A 54 454 485 HOH HOH . M 3 HOH A 55 455 421 HOH HOH . M 3 HOH A 56 456 448 HOH HOH . M 3 HOH A 57 457 509 HOH HOH . M 3 HOH A 58 458 428 HOH HOH . M 3 HOH A 59 459 433 HOH HOH . M 3 HOH A 60 460 442 HOH HOH . M 3 HOH A 61 461 524 HOH HOH . M 3 HOH A 62 462 552 HOH HOH . M 3 HOH A 63 463 565 HOH HOH . M 3 HOH A 64 464 419 HOH HOH . M 3 HOH A 65 465 569 HOH HOH . M 3 HOH A 66 466 413 HOH HOH . M 3 HOH A 67 467 453 HOH HOH . M 3 HOH A 68 468 514 HOH HOH . M 3 HOH A 69 469 594 HOH HOH . M 3 HOH A 70 470 423 HOH HOH . M 3 HOH A 71 471 471 HOH HOH . M 3 HOH A 72 472 483 HOH HOH . M 3 HOH A 73 473 449 HOH HOH . M 3 HOH A 74 474 479 HOH HOH . M 3 HOH A 75 475 533 HOH HOH . M 3 HOH A 76 476 562 HOH HOH . M 3 HOH A 77 477 498 HOH HOH . M 3 HOH A 78 478 401 HOH HOH . M 3 HOH A 79 479 495 HOH HOH . M 3 HOH A 80 480 447 HOH HOH . M 3 HOH A 81 481 591 HOH HOH . M 3 HOH A 82 482 553 HOH HOH . N 3 HOH B 1 401 461 HOH HOH . N 3 HOH B 2 402 497 HOH HOH . N 3 HOH B 3 403 443 HOH HOH . N 3 HOH B 4 404 492 HOH HOH . N 3 HOH B 5 405 560 HOH HOH . N 3 HOH B 6 406 589 HOH HOH . N 3 HOH B 7 407 505 HOH HOH . N 3 HOH B 8 408 465 HOH HOH . N 3 HOH B 9 409 487 HOH HOH . N 3 HOH B 10 410 474 HOH HOH . N 3 HOH B 11 411 510 HOH HOH . N 3 HOH B 12 412 506 HOH HOH . N 3 HOH B 13 413 476 HOH HOH . N 3 HOH B 14 414 502 HOH HOH . N 3 HOH B 15 415 519 HOH HOH . N 3 HOH B 16 416 529 HOH HOH . N 3 HOH B 17 417 404 HOH HOH . N 3 HOH B 18 418 511 HOH HOH . N 3 HOH B 19 419 550 HOH HOH . N 3 HOH B 20 420 441 HOH HOH . N 3 HOH B 21 421 429 HOH HOH . N 3 HOH B 22 422 564 HOH HOH . N 3 HOH B 23 423 408 HOH HOH . N 3 HOH B 24 424 577 HOH HOH . N 3 HOH B 25 425 452 HOH HOH . N 3 HOH B 26 426 537 HOH HOH . N 3 HOH B 27 427 583 HOH HOH . N 3 HOH B 28 428 436 HOH HOH . N 3 HOH B 29 429 459 HOH HOH . N 3 HOH B 30 430 412 HOH HOH . N 3 HOH B 31 431 414 HOH HOH . N 3 HOH B 32 432 478 HOH HOH . N 3 HOH B 33 433 581 HOH HOH . N 3 HOH B 34 434 426 HOH HOH . N 3 HOH B 35 435 572 HOH HOH . N 3 HOH B 36 436 531 HOH HOH . N 3 HOH B 37 437 480 HOH HOH . N 3 HOH B 38 438 528 HOH HOH . N 3 HOH B 39 439 571 HOH HOH . N 3 HOH B 40 440 530 HOH HOH . N 3 HOH B 41 441 516 HOH HOH . N 3 HOH B 42 442 434 HOH HOH . N 3 HOH B 43 443 523 HOH HOH . N 3 HOH B 44 444 464 HOH HOH . N 3 HOH B 45 445 585 HOH HOH . N 3 HOH B 46 446 520 HOH HOH . N 3 HOH B 47 447 418 HOH HOH . N 3 HOH B 48 448 470 HOH HOH . N 3 HOH B 49 449 522 HOH HOH . N 3 HOH B 50 450 536 HOH HOH . N 3 HOH B 51 451 513 HOH HOH . N 3 HOH B 52 452 532 HOH HOH . N 3 HOH B 53 453 432 HOH HOH . N 3 HOH B 54 454 567 HOH HOH . N 3 HOH B 55 455 512 HOH HOH . N 3 HOH B 56 456 549 HOH HOH . N 3 HOH B 57 457 570 HOH HOH . N 3 HOH B 58 458 403 HOH HOH . N 3 HOH B 59 459 542 HOH HOH . N 3 HOH B 60 460 491 HOH HOH . N 3 HOH B 61 461 539 HOH HOH . N 3 HOH B 62 462 463 HOH HOH . N 3 HOH B 63 463 595 HOH HOH . N 3 HOH B 64 464 489 HOH HOH . N 3 HOH B 65 465 540 HOH HOH . N 3 HOH B 66 466 406 HOH HOH . N 3 HOH B 67 467 578 HOH HOH . O 3 HOH C 1 401 493 HOH HOH . O 3 HOH C 2 402 587 HOH HOH . O 3 HOH C 3 403 451 HOH HOH . O 3 HOH C 4 404 543 HOH HOH . O 3 HOH C 5 405 407 HOH HOH . O 3 HOH C 6 406 556 HOH HOH . O 3 HOH C 7 407 494 HOH HOH . O 3 HOH C 8 408 582 HOH HOH . O 3 HOH C 9 409 430 HOH HOH . O 3 HOH C 10 410 504 HOH HOH . O 3 HOH C 11 411 535 HOH HOH . O 3 HOH C 12 412 450 HOH HOH . O 3 HOH C 13 413 417 HOH HOH . O 3 HOH C 14 414 500 HOH HOH . O 3 HOH C 15 415 477 HOH HOH . O 3 HOH C 16 416 538 HOH HOH . O 3 HOH C 17 417 420 HOH HOH . O 3 HOH C 18 418 525 HOH HOH . O 3 HOH C 19 419 557 HOH HOH . O 3 HOH C 20 420 588 HOH HOH . O 3 HOH C 21 421 573 HOH HOH . O 3 HOH C 22 422 405 HOH HOH . O 3 HOH C 23 423 566 HOH HOH . O 3 HOH C 24 424 455 HOH HOH . O 3 HOH C 25 425 456 HOH HOH . O 3 HOH C 26 426 526 HOH HOH . O 3 HOH C 27 427 544 HOH HOH . O 3 HOH C 28 428 507 HOH HOH . O 3 HOH C 29 429 580 HOH HOH . O 3 HOH C 30 430 437 HOH HOH . O 3 HOH C 31 431 503 HOH HOH . O 3 HOH C 32 432 527 HOH HOH . O 3 HOH C 33 433 575 HOH HOH . O 3 HOH C 34 434 472 HOH HOH . O 3 HOH C 35 435 484 HOH HOH . O 3 HOH C 36 436 515 HOH HOH . O 3 HOH C 37 437 551 HOH HOH . O 3 HOH C 38 438 458 HOH HOH . O 3 HOH C 39 439 446 HOH HOH . O 3 HOH C 40 440 554 HOH HOH . O 3 HOH C 41 441 444 HOH HOH . O 3 HOH C 42 442 574 HOH HOH . O 3 HOH C 43 443 415 HOH HOH . O 3 HOH C 44 444 488 HOH HOH . O 3 HOH C 45 445 555 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . L 2 -8.524 -19.07 -59.444 1 96.83 ? S SO4 302 C 1 HETATM 2 O O1 SO4 . . . L 2 -7.799 -18.865 -60.726 1 89.57 ? O1 SO4 302 C 1 HETATM 3 O O2 SO4 . . . L 2 -9.985 -18.948 -59.692 1 104.78 ? O2 SO4 302 C 1 HETATM 4 O O3 SO4 . . . L 2 -8.25 -20.412 -58.851 1 89.35 ? O3 SO4 302 C 1 HETATM 5 O O4 SO4 . . . L 2 -8.12 -18.018 -58.468 1 105.32 ? O4 SO4 302 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #