data_4ZJB # _model_server_result.job_id mjXcpiHqclWis-yweR091Q _model_server_result.datetime_utc '2024-10-10 05:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zjb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4ZJB # _exptl.entry_id 4ZJB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.348 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-PHOSPHOPANTETHEINE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZJB _cell.length_a 127.705 _cell.length_b 127.705 _cell.length_c 127.705 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZJB _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 44 _struct_conn.ptnr1_auth_asym_id G _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 36 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id PNS _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id G _struct_conn.ptnr2_auth_comp_id PNS _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.594 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H23 N2 O7 P S' _chem_comp.formula_weight 358.348 _chem_comp.id PNS _chem_comp.mon_nstd_flag . _chem_comp.name "4'-PHOSPHOPANTETHEINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 P24 PNS sing 267 n n O23 HOP1 PNS sing 268 n n P24 O25 PNS sing 269 n n P24 O26 PNS doub 270 n n P24 O27 PNS sing 271 n n O25 HOP2 PNS sing 272 n n O27 C28 PNS sing 273 n n C28 C29 PNS sing 274 n n C28 H282 PNS sing 275 n n C28 H281 PNS sing 276 n n C29 C30 PNS sing 277 n n C29 C31 PNS sing 278 n n C29 C32 PNS sing 279 n n C30 H303 PNS sing 280 n n C30 H302 PNS sing 281 n n C30 H301 PNS sing 282 n n C31 H313 PNS sing 283 n n C31 H312 PNS sing 284 n n C31 H311 PNS sing 285 n n C32 O33 PNS sing 286 n n C32 C34 PNS sing 287 n n C32 H32 PNS sing 288 n n O33 H33 PNS sing 289 n n C34 O35 PNS doub 290 n n C34 N36 PNS sing 291 n n N36 C37 PNS sing 292 n n N36 H36 PNS sing 293 n n C37 C38 PNS sing 294 n n C37 H372 PNS sing 295 n n C37 H371 PNS sing 296 n n C38 C39 PNS sing 297 n n C38 H382 PNS sing 298 n n C38 H381 PNS sing 299 n n C39 O40 PNS doub 300 n n C39 N41 PNS sing 301 n n N41 C42 PNS sing 302 n n N41 H41 PNS sing 303 n n C42 C43 PNS sing 304 n n C42 H422 PNS sing 305 n n C42 H421 PNS sing 306 n n C43 S44 PNS sing 307 n n C43 H431 PNS sing 308 n n C43 H432 PNS sing 309 n n S44 H44 PNS sing 310 n n # _atom_sites.entry_id 4ZJB _atom_sites.fract_transf_matrix[1][1] 0.007831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CIT B 1 501 501 CIT CIT . E 4 PNS G 1 401 401 PNS PSR . F 5 HOH A 1 201 11 HOH HOH . F 5 HOH A 2 202 41 HOH HOH . F 5 HOH A 3 203 38 HOH HOH . F 5 HOH A 4 204 56 HOH HOH . F 5 HOH A 5 205 18 HOH HOH . F 5 HOH A 6 206 29 HOH HOH . F 5 HOH A 7 207 16 HOH HOH . F 5 HOH A 8 208 23 HOH HOH . F 5 HOH A 9 209 15 HOH HOH . F 5 HOH A 10 210 5 HOH HOH . F 5 HOH A 11 211 19 HOH HOH . F 5 HOH A 12 212 12 HOH HOH . F 5 HOH A 13 213 4 HOH HOH . F 5 HOH A 14 214 40 HOH HOH . F 5 HOH A 15 215 20 HOH HOH . F 5 HOH A 16 216 31 HOH HOH . F 5 HOH A 17 217 17 HOH HOH . F 5 HOH A 18 218 27 HOH HOH . F 5 HOH A 19 219 60 HOH HOH . F 5 HOH A 20 220 10 HOH HOH . F 5 HOH A 21 221 21 HOH HOH . F 5 HOH A 22 222 8 HOH HOH . F 5 HOH A 23 223 2 HOH HOH . F 5 HOH A 24 224 28 HOH HOH . F 5 HOH A 25 225 71 HOH HOH . F 5 HOH A 26 226 39 HOH HOH . F 5 HOH A 27 227 61 HOH HOH . F 5 HOH A 28 228 35 HOH HOH . F 5 HOH A 29 229 59 HOH HOH . F 5 HOH A 30 230 64 HOH HOH . F 5 HOH A 31 231 42 HOH HOH . F 5 HOH A 32 232 65 HOH HOH . F 5 HOH A 33 233 25 HOH HOH . F 5 HOH A 34 234 72 HOH HOH . G 5 HOH B 1 601 6 HOH HOH . G 5 HOH B 2 602 36 HOH HOH . G 5 HOH B 3 603 33 HOH HOH . G 5 HOH B 4 604 51 HOH HOH . G 5 HOH B 5 605 57 HOH HOH . G 5 HOH B 6 606 22 HOH HOH . G 5 HOH B 7 607 1 HOH HOH . G 5 HOH B 8 608 63 HOH HOH . G 5 HOH B 9 609 3 HOH HOH . G 5 HOH B 10 610 47 HOH HOH . G 5 HOH B 11 611 46 HOH HOH . G 5 HOH B 12 612 43 HOH HOH . G 5 HOH B 13 613 50 HOH HOH . G 5 HOH B 14 614 52 HOH HOH . G 5 HOH B 15 615 66 HOH HOH . G 5 HOH B 16 616 58 HOH HOH . G 5 HOH B 17 617 14 HOH HOH . G 5 HOH B 18 618 24 HOH HOH . G 5 HOH B 19 619 9 HOH HOH . G 5 HOH B 20 620 54 HOH HOH . G 5 HOH B 21 621 7 HOH HOH . G 5 HOH B 22 622 26 HOH HOH . G 5 HOH B 23 623 34 HOH HOH . G 5 HOH B 24 624 49 HOH HOH . G 5 HOH B 25 625 13 HOH HOH . G 5 HOH B 26 626 32 HOH HOH . G 5 HOH B 27 627 44 HOH HOH . G 5 HOH B 28 628 55 HOH HOH . G 5 HOH B 29 629 48 HOH HOH . G 5 HOH B 30 630 53 HOH HOH . G 5 HOH B 31 631 45 HOH HOH . G 5 HOH B 32 632 37 HOH HOH . G 5 HOH B 33 633 30 HOH HOH . G 5 HOH B 34 634 62 HOH HOH . G 5 HOH B 35 635 68 HOH HOH . G 5 HOH B 36 636 70 HOH HOH . G 5 HOH B 37 637 67 HOH HOH . G 5 HOH B 38 638 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 PNS . . . E 4 -37.496 -41.911 -3.186 1 80.42 ? O23 PNS 401 G 1 HETATM 2 P P24 PNS . . . E 4 -38.651 -41.044 -2.797 1 80.65 ? P24 PNS 401 G 1 HETATM 3 O O25 PNS . . . E 4 -38.415 -39.725 -2.129 1 79.35 ? O25 PNS 401 G 1 HETATM 4 O O27 PNS . . . E 4 -39.558 -40.793 -4.091 1 81.62 ? O27 PNS 401 G 1 HETATM 5 C C28 PNS . . . E 4 -39.547 -41.705 -5.183 1 82.75 ? C28 PNS 401 G 1 HETATM 6 C C29 PNS . . . E 4 -40.256 -41.093 -6.381 1 83.57 ? C29 PNS 401 G 1 HETATM 7 C C30 PNS . . . E 4 -41.482 -40.334 -5.916 1 83 ? C30 PNS 401 G 1 HETATM 8 C C31 PNS . . . E 4 -39.327 -40.15 -7.119 1 82.95 ? C31 PNS 401 G 1 HETATM 9 C C32 PNS . . . E 4 -40.175 -42.449 -7.074 1 85.08 ? C32 PNS 401 G 1 HETATM 10 O O33 PNS . . . E 4 -41.095 -43.331 -6.693 1 83.63 ? O33 PNS 401 G 1 HETATM 11 C C34 PNS . . . E 4 -39.507 -42.416 -8.255 1 86.58 ? C34 PNS 401 G 1 HETATM 12 O O35 PNS . . . E 4 -38.355 -42.465 -8.091 1 87.61 ? O35 PNS 401 G 1 HETATM 13 N N36 PNS . . . E 4 -39.729 -42.514 -9.56 1 88.5 ? N36 PNS 401 G 1 HETATM 14 C C37 PNS . . . E 4 -40.957 -42.439 -10.33 1 89.35 ? C37 PNS 401 G 1 HETATM 15 C C38 PNS . . . E 4 -40.612 -41.408 -11.397 1 91.95 ? C38 PNS 401 G 1 HETATM 16 C C39 PNS . . . E 4 -40.958 -41.858 -12.796 1 93.85 ? C39 PNS 401 G 1 HETATM 17 O O40 PNS . . . E 4 -40.859 -43.021 -13.128 1 93.87 ? O40 PNS 401 G 1 HETATM 18 N N41 PNS . . . E 4 -41.361 -40.903 -13.627 1 95.41 ? N41 PNS 401 G 1 HETATM 19 C C42 PNS . . . E 4 -41.753 -41.023 -15.023 1 95.59 ? C42 PNS 401 G 1 HETATM 20 C C43 PNS . . . E 4 -41.16 -39.799 -15.709 1 94.94 ? C43 PNS 401 G 1 HETATM 21 S S44 PNS . . . E 4 -42.47 -38.804 -16.454 1 96.72 ? S44 PNS 401 G 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #