data_4ZJQ # _model_server_result.job_id YnGWikhr0shs3DV454tYDw _model_server_result.datetime_utc '2024-11-16 15:52:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zjq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1102}' # _entry.id 4ZJQ # _exptl.entry_id 4ZJQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.42 _cell.angle_gamma 90 _cell.entry_id 4ZJQ _cell.length_a 150.055 _cell.length_b 154.575 _cell.length_c 215.74 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZJQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M 1 1 D,E,F,N,O,P,Q,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 K N N ? 3 L N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 525 A HIS 525 1_555 J NI NI . A NI 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc2 A OD1 ASP 529 A ASP 529 1_555 J NI NI . A NI 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 A OD2 ASP 529 A ASP 529 1_555 J NI NI . A NI 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc4 J NI NI . A NI 1104 2_646 B NE2 HIS 525 B HIS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc5 J NI NI . A NI 1104 2_646 B OD1 ASP 529 B ASP 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc6 J NI NI . A NI 1104 2_646 B OD2 ASP 529 B ASP 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc7 C NE2 HIS 525 C HIS 525 1_555 M NI NI . C NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? metalc ? metalc8 C OD1 ASP 529 C ASP 529 1_555 M NI NI . C NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc9 C OD2 ASP 529 C ASP 529 1_555 M NI NI . C NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc10 M NI NI . C NI 1102 1_554 D NE2 HIS 525 D HIS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc11 M NI NI . C NI 1102 1_554 D OD1 ASP 529 D ASP 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc12 M NI NI . C NI 1102 1_554 D OD2 ASP 529 D ASP 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc13 E NE2 HIS 525 E HIS 525 1_555 R NI NI . E NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc14 E OD1 ASP 529 E ASP 529 1_555 R NI NI . E NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc15 E OD2 ASP 529 E ASP 529 1_555 R NI NI . E NI 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc16 R NI NI . E NI 1102 2_545 F NE2 HIS 525 F HIS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.835 ? metalc ? metalc17 R NI NI . E NI 1102 2_545 F OD2 ASP 529 F ASP 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 312 n n C1B O1B LMT sing 313 n n C1B O5B LMT sing 314 n n C1B H1B LMT sing 315 n n C2B C3B LMT sing 316 n n C2B O2B LMT sing 317 n n C2B H2B LMT sing 318 n n C3B C4B LMT sing 319 n n C3B O3B LMT sing 320 n n C3B H3B LMT sing 321 n n C4B C5B LMT sing 322 n n C4B O4' LMT sing 323 n n C4B H4B LMT sing 324 n n C5B C6B LMT sing 325 n n C5B O5B LMT sing 326 n n C5B H5B LMT sing 327 n n C6B O6B LMT sing 328 n n C6B "H6'2" LMT sing 329 n n C6B "H6'1" LMT sing 330 n n O1B C4' LMT sing 331 n n O2B H2O1 LMT sing 332 n n O3B H3O1 LMT sing 333 n n O4' H4O1 LMT sing 334 n n O6B H6B LMT sing 335 n n C1' C2' LMT sing 336 n n C1' O1' LMT sing 337 n n C1' O5' LMT sing 338 n n C1' H1' LMT sing 339 n n C2' C3' LMT sing 340 n n C2' O2' LMT sing 341 n n C2' H2' LMT sing 342 n n C3' C4' LMT sing 343 n n C3' O3' LMT sing 344 n n C3' H3' LMT sing 345 n n C4' C5' LMT sing 346 n n C4' H4' LMT sing 347 n n C5' C6' LMT sing 348 n n C5' O5' LMT sing 349 n n C5' H5' LMT sing 350 n n C6' O6' LMT sing 351 n n C6' H6D LMT sing 352 n n C6' H6E LMT sing 353 n n O1' C1 LMT sing 354 n n O2' H2O2 LMT sing 355 n n O3' H3O2 LMT sing 356 n n O6' H6' LMT sing 357 n n C1 C2 LMT sing 358 n n C1 H12 LMT sing 359 n n C1 H11 LMT sing 360 n n C2 C3 LMT sing 361 n n C2 H22 LMT sing 362 n n C2 H21 LMT sing 363 n n C3 C4 LMT sing 364 n n C3 H32 LMT sing 365 n n C3 H31 LMT sing 366 n n C4 C5 LMT sing 367 n n C4 H42 LMT sing 368 n n C4 H41 LMT sing 369 n n C5 C6 LMT sing 370 n n C5 H52 LMT sing 371 n n C5 H51 LMT sing 372 n n C6 C7 LMT sing 373 n n C6 H62 LMT sing 374 n n C6 H61 LMT sing 375 n n C7 C8 LMT sing 376 n n C7 H72 LMT sing 377 n n C7 H71 LMT sing 378 n n C8 C9 LMT sing 379 n n C8 H82 LMT sing 380 n n C8 H81 LMT sing 381 n n C9 C10 LMT sing 382 n n C9 H92 LMT sing 383 n n C9 H91 LMT sing 384 n n C10 C11 LMT sing 385 n n C10 H102 LMT sing 386 n n C10 H101 LMT sing 387 n n C11 C12 LMT sing 388 n n C11 H112 LMT sing 389 n n C11 H111 LMT sing 390 n n C12 H123 LMT sing 391 n n C12 H122 LMT sing 392 n n C12 H121 LMT sing 393 n n # _atom_sites.entry_id 4ZJQ _atom_sites.fract_transf_matrix[1][1] 0.006664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000281 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006469 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ERY A 1 1101 2000 ERY ERY . H 3 LMT A 1 1102 2100 LMT DDM . I 3 LMT A 1 1103 2200 LMT DDM . J 4 NI A 1 1104 3000 NI NI . K 3 LMT B 1 2100 2100 LMT DDM . L 3 LMT C 1 1101 2100 LMT DDM . M 4 NI C 1 1102 3000 NI NI . N 2 ERY D 1 1101 2000 ERY ERY . O 3 LMT D 1 1102 2100 LMT DDM . P 3 LMT D 1 1103 2200 LMT DDM . Q 3 LMT E 1 1101 2100 LMT DDM . R 4 NI E 1 1102 3000 NI NI . S 3 LMT F 1 2100 2100 LMT DDM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . H 3 60.467 58.265 111.349 1 71.47 ? C1B LMT 1102 A 1 HETATM 2 C C2B LMT . . . H 3 61.873 58.348 111.926 1 72.11 ? C2B LMT 1102 A 1 HETATM 3 C C3B LMT . . . H 3 61.823 58.069 113.353 1 71.83 ? C3B LMT 1102 A 1 HETATM 4 C C4B LMT . . . H 3 61.181 59.233 114.063 1 75.46 ? C4B LMT 1102 A 1 HETATM 5 C C5B LMT . . . H 3 59.802 59.534 113.444 1 82.56 ? C5B LMT 1102 A 1 HETATM 6 C C6B LMT . . . H 3 59.74 60.92 112.899 1 80.53 ? C6B LMT 1102 A 1 HETATM 7 O O1B LMT . . . H 3 60.195 57.008 110.872 1 71.56 ? O1B LMT 1102 A 1 HETATM 8 O O2B LMT . . . H 3 62.818 57.424 111.32 1 74.7 ? O2B LMT 1102 A 1 HETATM 9 O O3B LMT . . . H 3 63.232 57.849 113.778 1 72.82 ? O3B LMT 1102 A 1 HETATM 10 O O4' LMT . . . H 3 61.099 58.994 115.494 1 57.42 ? O4' LMT 1102 A 1 HETATM 11 O O5B LMT . . . H 3 59.409 58.595 112.375 1 74.48 ? O5B LMT 1102 A 1 HETATM 12 O O6B LMT . . . H 3 58.63 61.615 113.469 1 77.76 ? O6B LMT 1102 A 1 HETATM 13 C C1' LMT . . . H 3 58.195 55.352 107.606 1 72.17 ? C1' LMT 1102 A 1 HETATM 14 C C2' LMT . . . H 3 59.642 55.615 107.527 1 72.65 ? C2' LMT 1102 A 1 HETATM 15 C C3' LMT . . . H 3 60.244 55.866 108.823 1 69.96 ? C3' LMT 1102 A 1 HETATM 16 C C4' LMT . . . H 3 59.641 57.01 109.575 1 69.89 ? C4' LMT 1102 A 1 HETATM 17 C C5' LMT . . . H 3 58.099 56.875 109.691 1 69.87 ? C5' LMT 1102 A 1 HETATM 18 C C6' LMT . . . H 3 57.441 58.079 109.985 1 75.28 ? C6' LMT 1102 A 1 HETATM 19 O O1' LMT . . . H 3 57.605 55.392 106.275 1 79.92 ? O1' LMT 1102 A 1 HETATM 20 O O2' LMT . . . H 3 60.339 54.45 106.924 1 73.12 ? O2' LMT 1102 A 1 HETATM 21 O O3' LMT . . . H 3 61.64 56.185 108.53 1 76.37 ? O3' LMT 1102 A 1 HETATM 22 O O5' LMT . . . H 3 57.469 56.38 108.391 1 65.8 ? O5' LMT 1102 A 1 HETATM 23 O O6' LMT . . . H 3 56.326 57.74 110.785 1 78.45 ? O6' LMT 1102 A 1 HETATM 24 C C1 LMT . . . H 3 56.971 54.168 105.819 1 69.94 ? C1 LMT 1102 A 1 HETATM 25 C C2 LMT . . . H 3 57.181 54.084 104.267 1 66.22 ? C2 LMT 1102 A 1 HETATM 26 C C3 LMT . . . H 3 58.676 54.175 103.879 1 70.54 ? C3 LMT 1102 A 1 HETATM 27 C C4 LMT . . . H 3 59.028 53.306 102.686 1 70.02 ? C4 LMT 1102 A 1 HETATM 28 C C5 LMT . . . H 3 59.352 51.767 103.061 1 61.66 ? C5 LMT 1102 A 1 HETATM 29 C C6 LMT . . . H 3 60.788 51.539 103.465 1 64.9 ? C6 LMT 1102 A 1 HETATM 30 C C7 LMT . . . H 3 61.41 50.328 102.698 1 59.45 ? C7 LMT 1102 A 1 HETATM 31 C C8 LMT . . . H 3 60.3 49.259 102.319 1 49.98 ? C8 LMT 1102 A 1 HETATM 32 C C9 LMT . . . H 3 60.808 48.379 101.192 1 56.03 ? C9 LMT 1102 A 1 HETATM 33 C C10 LMT . . . H 3 59.843 47.203 100.945 1 56.47 ? C10 LMT 1102 A 1 HETATM 34 C C11 LMT . . . H 3 60.311 46.279 99.768 1 59.77 ? C11 LMT 1102 A 1 HETATM 35 C C12 LMT . . . H 3 60.583 44.89 100.315 1 61.66 ? C12 LMT 1102 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 76 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #