data_4ZJS # _model_server_result.job_id HfB8Ail-in9ufQRih9fv2A _model_server_result.datetime_utc '2024-11-24 18:08:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 4ZJS # _exptl.entry_id 4ZJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.232 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(1R,6R)-9-azabicyclo[4.2.1]non-2-en-2-yl]ethanone _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZJS _cell.length_a 207.604 _cell.length_b 207.604 _cell.length_c 207.604 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 136 A CYS 127 1_555 A SG CYS 149 A CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 199 A CYS 190 1_555 A SG CYS 200 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf3 B SG CYS 136 B CYS 127 1_555 B SG CYS 149 B CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 199 B CYS 190 1_555 B SG CYS 200 B CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf5 C SG CYS 136 C CYS 127 1_555 C SG CYS 149 C CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf6 C SG CYS 199 C CYS 190 1_555 C SG CYS 200 C CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 D SG CYS 136 D CYS 127 1_555 D SG CYS 149 D CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf8 D SG CYS 199 D CYS 190 1_555 D SG CYS 200 D CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf9 E SG CYS 136 E CYS 127 1_555 E SG CYS 149 E CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf10 E SG CYS 199 E CYS 190 1_555 E SG CYS 200 E CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? # _chem_comp.formula 'C10 H15 N O' _chem_comp.formula_weight 165.232 _chem_comp.id 4P0 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(1R,6R)-9-azabicyclo[4.2.1]non-2-en-2-yl]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 C10 4P0 doub 1 n n C10 C11 4P0 sing 2 n n C10 C6 4P0 sing 3 n n C4 C3 4P0 sing 4 n n C4 C6 4P0 sing 5 n n C4 N5 4P0 sing 6 n n C3 C2 4P0 sing 7 n n C6 C9 4P0 doub 8 n n N5 C1 4P0 sing 9 n n C2 C1 4P0 sing 10 n n C9 C8 4P0 sing 11 n n C1 C7 4P0 sing 12 n n C8 C7 4P0 sing 13 n n C11 H111 4P0 sing 14 n n C11 H112 4P0 sing 15 n n C11 H113 4P0 sing 16 n n C1 HC1 4P0 sing 17 n n C2 HC22 4P0 sing 18 n n C2 HC23 4P0 sing 19 n n C3 HC33 4P0 sing 20 n n C3 HC32 4P0 sing 21 n n C4 HC4 4P0 sing 22 n n C7 HC73 4P0 sing 23 n n C7 HC72 4P0 sing 24 n n C8 HC82 4P0 sing 25 n n C8 HC83 4P0 sing 26 n n C9 HC9 4P0 sing 27 n n N5 HN52 4P0 sing 28 n n # _atom_sites.entry_id 4ZJS _atom_sites.fract_transf_matrix[1][1] 0.004817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004817 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 4P0 B 1 301 301 4P0 4P0 . G 2 4P0 D 1 301 301 4P0 4P0 . H 2 4P0 E 1 301 301 4P0 4P0 . I 3 HOH A 1 301 301 HOH HOH . I 3 HOH A 2 302 302 HOH HOH . I 3 HOH A 3 303 303 HOH HOH . I 3 HOH A 4 304 304 HOH HOH . I 3 HOH A 5 305 305 HOH HOH . I 3 HOH A 6 306 306 HOH HOH . I 3 HOH A 7 307 307 HOH HOH . I 3 HOH A 8 308 308 HOH HOH . I 3 HOH A 9 309 309 HOH HOH . I 3 HOH A 10 310 310 HOH HOH . I 3 HOH A 11 311 311 HOH HOH . I 3 HOH A 12 312 312 HOH HOH . I 3 HOH A 13 313 313 HOH HOH . I 3 HOH A 14 314 314 HOH HOH . I 3 HOH A 15 315 315 HOH HOH . I 3 HOH A 16 316 316 HOH HOH . I 3 HOH A 17 317 317 HOH HOH . I 3 HOH A 18 318 318 HOH HOH . I 3 HOH A 19 319 319 HOH HOH . I 3 HOH A 20 320 320 HOH HOH . I 3 HOH A 21 321 321 HOH HOH . I 3 HOH A 22 322 322 HOH HOH . I 3 HOH A 23 323 323 HOH HOH . I 3 HOH A 24 324 324 HOH HOH . I 3 HOH A 25 325 325 HOH HOH . I 3 HOH A 26 326 326 HOH HOH . I 3 HOH A 27 327 327 HOH HOH . J 3 HOH B 1 401 401 HOH HOH . J 3 HOH B 2 402 402 HOH HOH . J 3 HOH B 3 403 403 HOH HOH . J 3 HOH B 4 404 404 HOH HOH . J 3 HOH B 5 405 405 HOH HOH . J 3 HOH B 6 406 406 HOH HOH . J 3 HOH B 7 407 407 HOH HOH . J 3 HOH B 8 408 408 HOH HOH . J 3 HOH B 9 409 409 HOH HOH . J 3 HOH B 10 410 410 HOH HOH . J 3 HOH B 11 411 411 HOH HOH . J 3 HOH B 12 412 412 HOH HOH . J 3 HOH B 13 413 413 HOH HOH . J 3 HOH B 14 414 414 HOH HOH . J 3 HOH B 15 415 415 HOH HOH . J 3 HOH B 16 416 416 HOH HOH . J 3 HOH B 17 417 417 HOH HOH . J 3 HOH B 18 418 418 HOH HOH . J 3 HOH B 19 419 419 HOH HOH . J 3 HOH B 20 420 420 HOH HOH . J 3 HOH B 21 421 421 HOH HOH . J 3 HOH B 22 422 422 HOH HOH . J 3 HOH B 23 423 423 HOH HOH . J 3 HOH B 24 424 424 HOH HOH . J 3 HOH B 25 425 425 HOH HOH . J 3 HOH B 26 426 426 HOH HOH . J 3 HOH B 27 427 427 HOH HOH . J 3 HOH B 28 428 428 HOH HOH . J 3 HOH B 29 429 429 HOH HOH . J 3 HOH B 30 430 430 HOH HOH . J 3 HOH B 31 431 431 HOH HOH . J 3 HOH B 32 432 432 HOH HOH . J 3 HOH B 33 433 433 HOH HOH . J 3 HOH B 34 434 434 HOH HOH . J 3 HOH B 35 435 435 HOH HOH . J 3 HOH B 36 436 436 HOH HOH . J 3 HOH B 37 437 437 HOH HOH . J 3 HOH B 38 438 438 HOH HOH . J 3 HOH B 39 439 439 HOH HOH . J 3 HOH B 40 440 440 HOH HOH . J 3 HOH B 41 441 441 HOH HOH . J 3 HOH B 42 442 442 HOH HOH . J 3 HOH B 43 443 443 HOH HOH . J 3 HOH B 44 444 444 HOH HOH . J 3 HOH B 45 445 445 HOH HOH . K 3 HOH C 1 301 301 HOH HOH . K 3 HOH C 2 302 302 HOH HOH . K 3 HOH C 3 303 303 HOH HOH . K 3 HOH C 4 304 304 HOH HOH . K 3 HOH C 5 305 305 HOH HOH . K 3 HOH C 6 306 306 HOH HOH . K 3 HOH C 7 307 307 HOH HOH . K 3 HOH C 8 308 308 HOH HOH . K 3 HOH C 9 309 309 HOH HOH . K 3 HOH C 10 310 310 HOH HOH . K 3 HOH C 11 311 311 HOH HOH . K 3 HOH C 12 312 312 HOH HOH . K 3 HOH C 13 313 313 HOH HOH . K 3 HOH C 14 314 314 HOH HOH . K 3 HOH C 15 315 315 HOH HOH . K 3 HOH C 16 316 316 HOH HOH . K 3 HOH C 17 317 317 HOH HOH . K 3 HOH C 18 318 318 HOH HOH . K 3 HOH C 19 319 319 HOH HOH . K 3 HOH C 20 320 320 HOH HOH . K 3 HOH C 21 321 321 HOH HOH . K 3 HOH C 22 322 322 HOH HOH . K 3 HOH C 23 323 323 HOH HOH . K 3 HOH C 24 324 324 HOH HOH . K 3 HOH C 25 325 325 HOH HOH . K 3 HOH C 26 326 326 HOH HOH . K 3 HOH C 27 327 327 HOH HOH . K 3 HOH C 28 328 328 HOH HOH . K 3 HOH C 29 329 329 HOH HOH . K 3 HOH C 30 330 330 HOH HOH . K 3 HOH C 31 331 331 HOH HOH . K 3 HOH C 32 332 332 HOH HOH . K 3 HOH C 33 333 333 HOH HOH . K 3 HOH C 34 334 334 HOH HOH . K 3 HOH C 35 335 335 HOH HOH . K 3 HOH C 36 336 336 HOH HOH . K 3 HOH C 37 337 337 HOH HOH . K 3 HOH C 38 338 338 HOH HOH . K 3 HOH C 39 339 339 HOH HOH . K 3 HOH C 40 340 340 HOH HOH . L 3 HOH D 1 401 401 HOH HOH . L 3 HOH D 2 402 402 HOH HOH . L 3 HOH D 3 403 403 HOH HOH . L 3 HOH D 4 404 404 HOH HOH . L 3 HOH D 5 405 405 HOH HOH . L 3 HOH D 6 406 406 HOH HOH . L 3 HOH D 7 407 407 HOH HOH . L 3 HOH D 8 408 408 HOH HOH . L 3 HOH D 9 409 409 HOH HOH . L 3 HOH D 10 410 410 HOH HOH . L 3 HOH D 11 411 411 HOH HOH . L 3 HOH D 12 412 412 HOH HOH . L 3 HOH D 13 413 413 HOH HOH . L 3 HOH D 14 414 414 HOH HOH . L 3 HOH D 15 415 415 HOH HOH . L 3 HOH D 16 416 416 HOH HOH . L 3 HOH D 17 417 417 HOH HOH . L 3 HOH D 18 418 418 HOH HOH . L 3 HOH D 19 419 419 HOH HOH . L 3 HOH D 20 420 420 HOH HOH . L 3 HOH D 21 421 421 HOH HOH . L 3 HOH D 22 422 422 HOH HOH . L 3 HOH D 23 423 423 HOH HOH . L 3 HOH D 24 424 424 HOH HOH . L 3 HOH D 25 425 425 HOH HOH . L 3 HOH D 26 426 426 HOH HOH . L 3 HOH D 27 427 427 HOH HOH . L 3 HOH D 28 428 428 HOH HOH . L 3 HOH D 29 429 429 HOH HOH . M 3 HOH E 1 401 401 HOH HOH . M 3 HOH E 2 402 402 HOH HOH . M 3 HOH E 3 403 403 HOH HOH . M 3 HOH E 4 404 404 HOH HOH . M 3 HOH E 5 405 405 HOH HOH . M 3 HOH E 6 406 406 HOH HOH . M 3 HOH E 7 407 407 HOH HOH . M 3 HOH E 8 408 408 HOH HOH . M 3 HOH E 9 409 409 HOH HOH . M 3 HOH E 10 410 410 HOH HOH . M 3 HOH E 11 411 411 HOH HOH . M 3 HOH E 12 412 412 HOH HOH . M 3 HOH E 13 413 413 HOH HOH . M 3 HOH E 14 414 414 HOH HOH . M 3 HOH E 15 415 415 HOH HOH . M 3 HOH E 16 416 416 HOH HOH . M 3 HOH E 17 417 417 HOH HOH . M 3 HOH E 18 418 418 HOH HOH . M 3 HOH E 19 419 419 HOH HOH . M 3 HOH E 20 420 420 HOH HOH . M 3 HOH E 21 421 421 HOH HOH . M 3 HOH E 22 422 422 HOH HOH . M 3 HOH E 23 423 423 HOH HOH . M 3 HOH E 24 424 424 HOH HOH . M 3 HOH E 25 425 425 HOH HOH . M 3 HOH E 26 426 426 HOH HOH . M 3 HOH E 27 427 427 HOH HOH . M 3 HOH E 28 428 428 HOH HOH . M 3 HOH E 29 429 429 HOH HOH . M 3 HOH E 30 430 430 HOH HOH . M 3 HOH E 31 431 431 HOH HOH . M 3 HOH E 32 432 432 HOH HOH . M 3 HOH E 33 433 433 HOH HOH . M 3 HOH E 34 434 434 HOH HOH . M 3 HOH E 35 435 435 HOH HOH . M 3 HOH E 36 436 436 HOH HOH . M 3 HOH E 37 437 437 HOH HOH . M 3 HOH E 38 438 438 HOH HOH . M 3 HOH E 39 439 439 HOH HOH . M 3 HOH E 40 440 440 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 4P0 . . . F 2 -28.273 29.294 56.036 1 36.73 ? C10 4P0 301 B 1 HETATM 2 C C11 4P0 . . . F 2 -28.13 27.902 55.525 1 33.29 ? C11 4P0 301 B 1 HETATM 3 O O12 4P0 . . . F 2 -27.316 29.98 56.372 1 31.85 ? O12 4P0 301 B 1 HETATM 4 C C1 4P0 . . . F 2 -31.992 31.389 57.432 1 35.04 ? C1 4P0 301 B 1 HETATM 5 C C2 4P0 . . . F 2 -32.082 32.149 56.142 1 32.1 ? C2 4P0 301 B 1 HETATM 6 C C3 4P0 . . . F 2 -30.782 31.913 55.428 1 32.49 ? C3 4P0 301 B 1 HETATM 7 C C4 4P0 . . . F 2 -29.856 31.244 56.413 1 34.48 ? C4 4P0 301 B 1 HETATM 8 C C6 4P0 . . . F 2 -29.65 29.811 56.116 1 33.08 ? C6 4P0 301 B 1 HETATM 9 C C7 4P0 . . . F 2 -32.417 29.943 57.314 1 32.63 ? C7 4P0 301 B 1 HETATM 10 C C8 4P0 . . . F 2 -32.066 29.297 55.986 1 36.77 ? C8 4P0 301 B 1 HETATM 11 C C9 4P0 . . . F 2 -30.622 28.919 55.929 1 40.22 ? C9 4P0 301 B 1 HETATM 12 N N5 4P0 . . . F 2 -30.539 31.393 57.706 1 34.3 ? N5 4P0 301 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #