data_4ZKE
#
_model_server_result.job_id            T-ifPBds6Seec-JKjTAL0g 
_model_server_result.datetime_utc      '2024-11-05 00:53:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zke 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":802}' 
#
_entry.id    4ZKE 
#
_exptl.entry_id    4ZKE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZKE 
_cell.length_a            91.15 
_cell.length_b            123.106 
_cell.length_c            104.967 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZKE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 33 A SER 281 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc2 A OG SER 85 A SER 333 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc3 B MG MG . A MG 801 1_555 C O1G GTP . A GTP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc4 B MG MG . A MG 801 1_555 C O1B GTP . A GTP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc5 B MG MG . A MG 801 1_555 F O HOH . A HOH 928 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc6 B MG MG . A MG 801 1_555 F O HOH . A HOH 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc7 C O2G GTP . A GTP 802 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? 
metalc ? metalc8 C O3B GTP . A GTP 802 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? 
metalc ? metalc9 C O2A GTP . A GTP 802 1_555 D NA NA . A NA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 129 n n 
PG O2G GTP sing 130 n n 
PG O3G GTP sing 131 n n 
PG O3B GTP sing 132 n n 
O2G HOG2 GTP sing 133 n n 
O3G HOG3 GTP sing 134 n n 
O3B PB GTP sing 135 n n 
PB O1B GTP doub 136 n n 
PB O2B GTP sing 137 n n 
PB O3A GTP sing 138 n n 
O2B HOB2 GTP sing 139 n n 
O3A PA GTP sing 140 n n 
PA O1A GTP doub 141 n n 
PA O2A GTP sing 142 n n 
PA O5' GTP sing 143 n n 
O2A HOA2 GTP sing 144 n n 
O5' C5' GTP sing 145 n n 
C5' C4' GTP sing 146 n n 
C5' H5' GTP sing 147 n n 
C5' "H5''" GTP sing 148 n n 
C4' O4' GTP sing 149 n n 
C4' C3' GTP sing 150 n n 
C4' H4' GTP sing 151 n n 
O4' C1' GTP sing 152 n n 
C3' O3' GTP sing 153 n n 
C3' C2' GTP sing 154 n n 
C3' H3' GTP sing 155 n n 
O3' HO3' GTP sing 156 n n 
C2' O2' GTP sing 157 n n 
C2' C1' GTP sing 158 n n 
C2' H2' GTP sing 159 n n 
O2' HO2' GTP sing 160 n n 
C1' N9 GTP sing 161 n n 
C1' H1' GTP sing 162 n n 
N9 C8 GTP sing 163 n y 
N9 C4 GTP sing 164 n y 
C8 N7 GTP doub 165 n y 
C8 H8 GTP sing 166 n n 
N7 C5 GTP sing 167 n y 
C5 C6 GTP sing 168 n n 
C5 C4 GTP doub 169 n y 
C6 O6 GTP doub 170 n n 
C6 N1 GTP sing 171 n n 
N1 C2 GTP sing 172 n n 
N1 HN1 GTP sing 173 n n 
C2 N2 GTP sing 174 n n 
C2 N3 GTP doub 175 n n 
N2 HN21 GTP sing 176 n n 
N2 HN22 GTP sing 177 n n 
N3 C4 GTP sing 178 n n 
#
_atom_sites.entry_id                     4ZKE 
_atom_sites.fract_transf_matrix[1][1]    0.010971 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008123 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009527 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 801 902 MG MG . 
C 3 GTP A 1 802 1 GTP GTP . 
D 4 NA A 1 803 1 NA NA . 
E 5 PGE A 1 804 1 PGE PGE . 
F 6 HOH A 1 901 76 HOH HOH . 
F 6 HOH A 2 902 57 HOH HOH . 
F 6 HOH A 3 903 75 HOH HOH . 
F 6 HOH A 4 904 89 HOH HOH . 
F 6 HOH A 5 905 53 HOH HOH . 
F 6 HOH A 6 906 47 HOH HOH . 
F 6 HOH A 7 907 54 HOH HOH . 
F 6 HOH A 8 908 48 HOH HOH . 
F 6 HOH A 9 909 63 HOH HOH . 
F 6 HOH A 10 910 50 HOH HOH . 
F 6 HOH A 11 911 68 HOH HOH . 
F 6 HOH A 12 912 16 HOH HOH . 
F 6 HOH A 13 913 29 HOH HOH . 
F 6 HOH A 14 914 4 HOH HOH . 
F 6 HOH A 15 915 24 HOH HOH . 
F 6 HOH A 16 916 26 HOH HOH . 
F 6 HOH A 17 917 2 HOH HOH . 
F 6 HOH A 18 918 10 HOH HOH . 
F 6 HOH A 19 919 72 HOH HOH . 
F 6 HOH A 20 920 55 HOH HOH . 
F 6 HOH A 21 921 45 HOH HOH . 
F 6 HOH A 22 922 91 HOH HOH . 
F 6 HOH A 23 923 38 HOH HOH . 
F 6 HOH A 24 924 7 HOH HOH . 
F 6 HOH A 25 925 41 HOH HOH . 
F 6 HOH A 26 926 71 HOH HOH . 
F 6 HOH A 27 927 44 HOH HOH . 
F 6 HOH A 28 928 1 HOH HOH . 
F 6 HOH A 29 929 8 HOH HOH . 
F 6 HOH A 30 930 3 HOH HOH . 
F 6 HOH A 31 931 11 HOH HOH . 
F 6 HOH A 32 932 22 HOH HOH . 
F 6 HOH A 33 933 90 HOH HOH . 
F 6 HOH A 34 934 31 HOH HOH . 
F 6 HOH A 35 935 32 HOH HOH . 
F 6 HOH A 36 936 35 HOH HOH . 
F 6 HOH A 37 937 43 HOH HOH . 
F 6 HOH A 38 938 33 HOH HOH . 
F 6 HOH A 39 939 84 HOH HOH . 
F 6 HOH A 40 940 6 HOH HOH . 
F 6 HOH A 41 941 64 HOH HOH . 
F 6 HOH A 42 942 49 HOH HOH . 
F 6 HOH A 43 943 86 HOH HOH . 
F 6 HOH A 44 944 40 HOH HOH . 
F 6 HOH A 45 945 23 HOH HOH . 
F 6 HOH A 46 946 79 HOH HOH . 
F 6 HOH A 47 947 9 HOH HOH . 
F 6 HOH A 48 948 34 HOH HOH . 
F 6 HOH A 49 949 17 HOH HOH . 
F 6 HOH A 50 950 74 HOH HOH . 
F 6 HOH A 51 951 12 HOH HOH . 
F 6 HOH A 52 952 14 HOH HOH . 
F 6 HOH A 53 953 19 HOH HOH . 
F 6 HOH A 54 954 21 HOH HOH . 
F 6 HOH A 55 955 30 HOH HOH . 
F 6 HOH A 56 956 87 HOH HOH . 
F 6 HOH A 57 957 95 HOH HOH . 
F 6 HOH A 58 958 92 HOH HOH . 
F 6 HOH A 59 959 59 HOH HOH . 
F 6 HOH A 60 960 78 HOH HOH . 
F 6 HOH A 61 961 77 HOH HOH . 
F 6 HOH A 62 962 52 HOH HOH . 
F 6 HOH A 63 963 25 HOH HOH . 
F 6 HOH A 64 964 13 HOH HOH . 
F 6 HOH A 65 965 15 HOH HOH . 
F 6 HOH A 66 966 69 HOH HOH . 
F 6 HOH A 67 967 85 HOH HOH . 
F 6 HOH A 68 968 81 HOH HOH . 
F 6 HOH A 69 969 20 HOH HOH . 
F 6 HOH A 70 970 39 HOH HOH . 
F 6 HOH A 71 971 18 HOH HOH . 
F 6 HOH A 72 972 67 HOH HOH . 
F 6 HOH A 73 973 37 HOH HOH . 
F 6 HOH A 74 974 66 HOH HOH . 
F 6 HOH A 75 975 96 HOH HOH . 
F 6 HOH A 76 976 46 HOH HOH . 
F 6 HOH A 77 977 56 HOH HOH . 
F 6 HOH A 78 978 51 HOH HOH . 
F 6 HOH A 79 979 82 HOH HOH . 
F 6 HOH A 80 980 27 HOH HOH . 
F 6 HOH A 81 981 42 HOH HOH . 
F 6 HOH A 82 982 61 HOH HOH . 
F 6 HOH A 83 983 28 HOH HOH . 
F 6 HOH A 84 984 80 HOH HOH . 
F 6 HOH A 85 985 65 HOH HOH . 
F 6 HOH A 86 986 58 HOH HOH . 
F 6 HOH A 87 987 94 HOH HOH . 
F 6 HOH A 88 988 73 HOH HOH . 
F 6 HOH A 89 989 5 HOH HOH . 
F 6 HOH A 90 990 93 HOH HOH . 
F 6 HOH A 91 991 60 HOH HOH . 
F 6 HOH A 92 992 83 HOH HOH . 
F 6 HOH A 93 993 36 HOH HOH . 
F 6 HOH A 94 994 88 HOH HOH . 
F 6 HOH A 95 995 62 HOH HOH . 
F 6 HOH A 96 996 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . C 3 72.419 -15.745 54.706 1 44.5 ? PG GTP 802 A 1 
HETATM 2 O O1G GTP . . . C 3 72.661 -16.112 53.263 1 43.19 ? O1G GTP 802 A 1 
HETATM 3 O O2G GTP . . . C 3 70.949 -15.457 54.893 1 45.18 ? O2G GTP 802 A 1 
HETATM 4 O O3G GTP . . . C 3 72.828 -16.867 55.631 1 42.37 ? O3G GTP 802 A 1 
HETATM 5 O O3B GTP . . . C 3 73.246 -14.412 55.07 1 44.76 ? O3B GTP 802 A 1 
HETATM 6 P PB GTP . . . C 3 74.848 -14.385 54.945 1 43.53 ? PB GTP 802 A 1 
HETATM 7 O O1B GTP . . . C 3 75.254 -15.019 53.634 1 43.13 ? O1B GTP 802 A 1 
HETATM 8 O O2B GTP . . . C 3 75.508 -15.091 56.105 1 44.89 ? O2B GTP 802 A 1 
HETATM 9 O O3A GTP . . . C 3 75.257 -12.825 54.948 1 42.48 ? O3A GTP 802 A 1 
HETATM 10 P PA GTP . . . C 3 75.11 -11.825 53.689 1 43.53 ? PA GTP 802 A 1 
HETATM 11 O O1A GTP . . . C 3 76.319 -11.973 52.804 1 43.56 ? O1A GTP 802 A 1 
HETATM 12 O O2A GTP . . . C 3 73.827 -12.029 52.918 1 44.61 ? O2A GTP 802 A 1 
HETATM 13 O O5' GTP . . . C 3 75.127 -10.365 54.367 1 46.1 ? O5' GTP 802 A 1 
HETATM 14 C C5' GTP . . . C 3 74.104 -9.918 55.232 1 46.84 ? C5' GTP 802 A 1 
HETATM 15 C C4' GTP . . . C 3 74.141 -8.394 55.271 1 47.1 ? C4' GTP 802 A 1 
HETATM 16 O O4' GTP . . . C 3 75.281 -7.996 56.005 1 45.52 ? O4' GTP 802 A 1 
HETATM 17 C C3' GTP . . . C 3 74.255 -7.775 53.89 1 48.11 ? C3' GTP 802 A 1 
HETATM 18 O O3' GTP . . . C 3 73.35 -6.703 53.773 1 50.82 ? O3' GTP 802 A 1 
HETATM 19 C C2' GTP . . . C 3 75.673 -7.257 53.801 1 49.54 ? C2' GTP 802 A 1 
HETATM 20 O O2' GTP . . . C 3 75.732 -6.042 53.091 1 54.39 ? O2' GTP 802 A 1 
HETATM 21 C C1' GTP . . . C 3 76.083 -7.101 55.258 1 47.68 ? C1' GTP 802 A 1 
HETATM 22 N N9 GTP . . . C 3 77.497 -7.438 55.477 1 48.51 ? N9 GTP 802 A 1 
HETATM 23 C C8 GTP . . . C 3 78.132 -8.618 55.192 1 47.4 ? C8 GTP 802 A 1 
HETATM 24 N N7 GTP . . . C 3 79.428 -8.504 55.569 1 47.53 ? N7 GTP 802 A 1 
HETATM 25 C C5 GTP . . . C 3 79.62 -7.276 56.104 1 49.27 ? C5 GTP 802 A 1 
HETATM 26 C C6 GTP . . . C 3 80.735 -6.638 56.644 1 47.14 ? C6 GTP 802 A 1 
HETATM 27 O O6 GTP . . . C 3 81.826 -7.206 56.705 1 46.18 ? O6 GTP 802 A 1 
HETATM 28 N N1 GTP . . . C 3 80.609 -5.349 57.111 1 50.15 ? N1 GTP 802 A 1 
HETATM 29 C C2 GTP . . . C 3 79.393 -4.702 57.049 1 50.05 ? C2 GTP 802 A 1 
HETATM 30 N N2 GTP . . . C 3 79.272 -3.46 57.502 1 52.14 ? N2 GTP 802 A 1 
HETATM 31 N N3 GTP . . . C 3 78.297 -5.338 56.515 1 52.07 ? N3 GTP 802 A 1 
HETATM 32 C C4 GTP . . . C 3 78.41 -6.6 56.049 1 50.96 ? C4 GTP 802 A 1 
HETATM 33 H H4' GTP . . . C 3 73.235 -8.027 55.753 1 56.53 ? H4' GTP 802 A 1 
HETATM 34 H H3' GTP . . . C 3 74.082 -8.529 53.123 1 57.73 ? H3' GTP 802 A 1 
HETATM 35 H HO3' GTP . . . C 3 73.847 -5.866 53.661 1 60.98 ? HO3' GTP 802 A 1 
HETATM 36 H H2' GTP . . . C 3 76.303 -8.009 53.327 1 59.45 ? H2' GTP 802 A 1 
HETATM 37 H HO2' GTP . . . C 3 76.032 -5.327 53.691 1 65.27 ? HO2' GTP 802 A 1 
HETATM 38 H H1' GTP . . . C 3 75.89 -6.075 55.572 1 57.22 ? H1' GTP 802 A 1 
HETATM 39 H H8 GTP . . . C 3 77.674 -9.497 54.739 1 56.88 ? H8 GTP 802 A 1 
HETATM 40 H HN1 GTP . . . C 3 81.435 -4.861 57.513 1 60.18 ? HN1 GTP 802 A 1 
HETATM 41 H HN21 GTP . . . C 3 78.375 -2.987 57.452 1 62.56 ? HN21 GTP 802 A 1 
HETATM 42 H HN22 GTP . . . C 3 80.077 -2.982 57.894 1 62.56 ? HN22 GTP 802 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           42 
#