data_4ZKN # _model_server_result.job_id kVDHjxCqZnf0V_1MDJz4wg _model_server_result.datetime_utc '2024-11-22 23:40:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zkn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4ZKN # _exptl.entry_id 4ZKN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZKN _cell.length_a 121.049 _cell.length_b 121.049 _cell.length_c 42.979 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf6 B SG CYS 1 P CYS 1 1_555 B SG CYS 12 P CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 4ZKN _atom_sites.fract_transf_matrix[1][1] 0.008261 _atom_sites.fract_transf_matrix[1][2] 0.00477 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 U 1 301 1 SO4 SO4 . D 4 PG4 U 1 302 6112 PG4 PG4 . E 4 PG4 U 1 303 6113 PG4 PG4 . F 5 HOH U 1 401 76 HOH HOH . F 5 HOH U 2 402 116 HOH HOH . F 5 HOH U 3 403 126 HOH HOH . F 5 HOH U 4 404 20 HOH HOH . F 5 HOH U 5 405 45 HOH HOH . F 5 HOH U 6 406 82 HOH HOH . F 5 HOH U 7 407 93 HOH HOH . F 5 HOH U 8 408 95 HOH HOH . F 5 HOH U 9 409 100 HOH HOH . F 5 HOH U 10 410 91 HOH HOH . F 5 HOH U 11 411 37 HOH HOH . F 5 HOH U 12 412 174 HOH HOH . F 5 HOH U 13 413 23 HOH HOH . F 5 HOH U 14 414 141 HOH HOH . F 5 HOH U 15 415 101 HOH HOH . F 5 HOH U 16 416 98 HOH HOH . F 5 HOH U 17 417 51 HOH HOH . F 5 HOH U 18 418 113 HOH HOH . F 5 HOH U 19 419 63 HOH HOH . F 5 HOH U 20 420 172 HOH HOH . F 5 HOH U 21 421 43 HOH HOH . F 5 HOH U 22 422 71 HOH HOH . F 5 HOH U 23 423 18 HOH HOH . F 5 HOH U 24 424 64 HOH HOH . F 5 HOH U 25 425 110 HOH HOH . F 5 HOH U 26 426 171 HOH HOH . F 5 HOH U 27 427 35 HOH HOH . F 5 HOH U 28 428 34 HOH HOH . F 5 HOH U 29 429 30 HOH HOH . F 5 HOH U 30 430 56 HOH HOH . F 5 HOH U 31 431 136 HOH HOH . F 5 HOH U 32 432 55 HOH HOH . F 5 HOH U 33 433 1 HOH HOH . F 5 HOH U 34 434 16 HOH HOH . F 5 HOH U 35 435 105 HOH HOH . F 5 HOH U 36 436 39 HOH HOH . F 5 HOH U 37 437 135 HOH HOH . F 5 HOH U 38 438 156 HOH HOH . F 5 HOH U 39 439 12 HOH HOH . F 5 HOH U 40 440 13 HOH HOH . F 5 HOH U 41 441 49 HOH HOH . F 5 HOH U 42 442 19 HOH HOH . F 5 HOH U 43 443 58 HOH HOH . F 5 HOH U 44 444 38 HOH HOH . F 5 HOH U 45 445 42 HOH HOH . F 5 HOH U 46 446 11 HOH HOH . F 5 HOH U 47 447 89 HOH HOH . F 5 HOH U 48 448 77 HOH HOH . F 5 HOH U 49 449 125 HOH HOH . F 5 HOH U 50 450 33 HOH HOH . F 5 HOH U 51 451 128 HOH HOH . F 5 HOH U 52 452 114 HOH HOH . F 5 HOH U 53 453 9 HOH HOH . F 5 HOH U 54 454 25 HOH HOH . F 5 HOH U 55 455 24 HOH HOH . F 5 HOH U 56 456 173 HOH HOH . F 5 HOH U 57 457 6 HOH HOH . F 5 HOH U 58 458 29 HOH HOH . F 5 HOH U 59 459 27 HOH HOH . F 5 HOH U 60 460 144 HOH HOH . F 5 HOH U 61 461 22 HOH HOH . F 5 HOH U 62 462 74 HOH HOH . F 5 HOH U 63 463 112 HOH HOH . F 5 HOH U 64 464 14 HOH HOH . F 5 HOH U 65 465 109 HOH HOH . F 5 HOH U 66 466 50 HOH HOH . F 5 HOH U 67 467 97 HOH HOH . F 5 HOH U 68 468 148 HOH HOH . F 5 HOH U 69 469 61 HOH HOH . F 5 HOH U 70 470 122 HOH HOH . F 5 HOH U 71 471 157 HOH HOH . F 5 HOH U 72 472 102 HOH HOH . F 5 HOH U 73 473 41 HOH HOH . F 5 HOH U 74 474 62 HOH HOH . F 5 HOH U 75 475 96 HOH HOH . F 5 HOH U 76 476 143 HOH HOH . F 5 HOH U 77 477 73 HOH HOH . F 5 HOH U 78 478 78 HOH HOH . F 5 HOH U 79 479 92 HOH HOH . F 5 HOH U 80 480 36 HOH HOH . F 5 HOH U 81 481 10 HOH HOH . F 5 HOH U 82 482 154 HOH HOH . F 5 HOH U 83 483 44 HOH HOH . F 5 HOH U 84 484 151 HOH HOH . F 5 HOH U 85 485 130 HOH HOH . F 5 HOH U 86 486 70 HOH HOH . F 5 HOH U 87 487 32 HOH HOH . F 5 HOH U 88 488 26 HOH HOH . F 5 HOH U 89 489 17 HOH HOH . F 5 HOH U 90 490 53 HOH HOH . F 5 HOH U 91 491 133 HOH HOH . F 5 HOH U 92 492 99 HOH HOH . F 5 HOH U 93 493 47 HOH HOH . F 5 HOH U 94 494 138 HOH HOH . F 5 HOH U 95 495 8 HOH HOH . F 5 HOH U 96 496 5 HOH HOH . F 5 HOH U 97 497 48 HOH HOH . F 5 HOH U 98 498 119 HOH HOH . F 5 HOH U 99 499 79 HOH HOH . F 5 HOH U 100 500 84 HOH HOH . F 5 HOH U 101 501 81 HOH HOH . F 5 HOH U 102 502 54 HOH HOH . F 5 HOH U 103 503 46 HOH HOH . F 5 HOH U 104 504 15 HOH HOH . F 5 HOH U 105 505 107 HOH HOH . F 5 HOH U 106 506 68 HOH HOH . F 5 HOH U 107 507 121 HOH HOH . F 5 HOH U 108 508 142 HOH HOH . F 5 HOH U 109 509 52 HOH HOH . F 5 HOH U 110 510 147 HOH HOH . F 5 HOH U 111 511 152 HOH HOH . F 5 HOH U 112 512 21 HOH HOH . F 5 HOH U 113 513 108 HOH HOH . F 5 HOH U 114 514 120 HOH HOH . F 5 HOH U 115 515 75 HOH HOH . F 5 HOH U 116 516 67 HOH HOH . F 5 HOH U 117 517 106 HOH HOH . F 5 HOH U 118 518 111 HOH HOH . F 5 HOH U 119 519 90 HOH HOH . F 5 HOH U 120 520 60 HOH HOH . F 5 HOH U 121 521 88 HOH HOH . F 5 HOH U 122 522 166 HOH HOH . F 5 HOH U 123 523 80 HOH HOH . F 5 HOH U 124 524 139 HOH HOH . F 5 HOH U 125 525 7 HOH HOH . F 5 HOH U 126 526 175 HOH HOH . F 5 HOH U 127 527 153 HOH HOH . F 5 HOH U 128 528 155 HOH HOH . F 5 HOH U 129 529 28 HOH HOH . F 5 HOH U 130 530 4 HOH HOH . F 5 HOH U 131 531 3 HOH HOH . F 5 HOH U 132 532 118 HOH HOH . F 5 HOH U 133 533 169 HOH HOH . F 5 HOH U 134 534 2 HOH HOH . F 5 HOH U 135 535 159 HOH HOH . F 5 HOH U 136 536 132 HOH HOH . F 5 HOH U 137 537 31 HOH HOH . F 5 HOH U 138 538 117 HOH HOH . F 5 HOH U 139 539 87 HOH HOH . F 5 HOH U 140 540 72 HOH HOH . F 5 HOH U 141 541 160 HOH HOH . F 5 HOH U 142 542 170 HOH HOH . F 5 HOH U 143 543 164 HOH HOH . F 5 HOH U 144 544 129 HOH HOH . F 5 HOH U 145 545 165 HOH HOH . F 5 HOH U 146 546 104 HOH HOH . F 5 HOH U 147 547 149 HOH HOH . F 5 HOH U 148 548 94 HOH HOH . F 5 HOH U 149 549 115 HOH HOH . F 5 HOH U 150 550 65 HOH HOH . F 5 HOH U 151 551 145 HOH HOH . F 5 HOH U 152 552 158 HOH HOH . F 5 HOH U 153 553 66 HOH HOH . F 5 HOH U 154 554 131 HOH HOH . F 5 HOH U 155 555 134 HOH HOH . F 5 HOH U 156 556 103 HOH HOH . F 5 HOH U 157 557 59 HOH HOH . F 5 HOH U 158 558 161 HOH HOH . F 5 HOH U 159 559 150 HOH HOH . F 5 HOH U 160 560 162 HOH HOH . F 5 HOH U 161 561 124 HOH HOH . F 5 HOH U 162 562 137 HOH HOH . F 5 HOH U 163 563 163 HOH HOH . F 5 HOH U 164 564 127 HOH HOH . F 5 HOH U 165 565 167 HOH HOH . G 5 HOH P 1 101 40 HOH HOH . G 5 HOH P 2 102 57 HOH HOH . G 5 HOH P 3 103 83 HOH HOH . G 5 HOH P 4 104 69 HOH HOH . G 5 HOH P 5 105 168 HOH HOH . G 5 HOH P 6 106 123 HOH HOH . G 5 HOH P 7 107 140 HOH HOH . G 5 HOH P 8 108 146 HOH HOH . G 5 HOH P 9 109 85 HOH HOH . G 5 HOH P 10 110 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 -25.221 -11.895 -30.83 1 45.82 ? O1 PG4 302 U 1 HETATM 2 C C1 PG4 . . . D 4 -26.171 -11.379 -31.768 1 46.99 ? C1 PG4 302 U 1 HETATM 3 C C2 PG4 . . . D 4 -25.515 -11.232 -33.137 1 47.61 ? C2 PG4 302 U 1 HETATM 4 O O2 PG4 . . . D 4 -24.877 -12.454 -33.506 1 48.1 ? O2 PG4 302 U 1 HETATM 5 C C3 PG4 . . . D 4 -23.51 -12.235 -33.848 1 48.59 ? C3 PG4 302 U 1 HETATM 6 C C4 PG4 . . . D 4 -23.068 -13.236 -34.905 1 48.91 ? C4 PG4 302 U 1 HETATM 7 O O3 PG4 . . . D 4 -21.964 -13.989 -34.408 1 49.32 ? O3 PG4 302 U 1 HETATM 8 C C5 PG4 . . . D 4 -21.499 -14.941 -35.362 1 49.71 ? C5 PG4 302 U 1 HETATM 9 C C6 PG4 . . . D 4 -21.391 -16.314 -34.711 1 50 ? C6 PG4 302 U 1 HETATM 10 O O4 PG4 . . . D 4 -22.101 -17.267 -35.501 1 50.38 ? O4 PG4 302 U 1 HETATM 11 C C7 PG4 . . . D 4 -22.966 -18.081 -34.708 1 49.9 ? C7 PG4 302 U 1 HETATM 12 C C8 PG4 . . . D 4 -24.378 -18.065 -35.285 1 49.94 ? C8 PG4 302 U 1 HETATM 13 O O5 PG4 . . . D 4 -25.243 -18.867 -34.473 1 49.56 ? O5 PG4 302 U 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #