data_4ZKO # _model_server_result.job_id 6f5e6aqA7YV-l8XPi10GoQ _model_server_result.datetime_utc '2025-01-10 14:13:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 4ZKO # _exptl.entry_id 4ZKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZKO _cell.length_a 121.149 _cell.length_b 121.149 _cell.length_c 42.914 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 237 n n O1 H1 P6G sing 238 n n C2 C3 P6G sing 239 n n C2 H21 P6G sing 240 n n C2 H22 P6G sing 241 n n C3 O4 P6G sing 242 n n C3 H31 P6G sing 243 n n C3 H32 P6G sing 244 n n O4 C5 P6G sing 245 n n C5 C6 P6G sing 246 n n C5 H51 P6G sing 247 n n C5 H52 P6G sing 248 n n C6 O7 P6G sing 249 n n C6 H61 P6G sing 250 n n C6 H62 P6G sing 251 n n O7 C8 P6G sing 252 n n C8 C9 P6G sing 253 n n C8 H81 P6G sing 254 n n C8 H82 P6G sing 255 n n C9 O10 P6G sing 256 n n C9 H91 P6G sing 257 n n C9 H92 P6G sing 258 n n O10 C11 P6G sing 259 n n C11 C12 P6G sing 260 n n C11 H111 P6G sing 261 n n C11 H112 P6G sing 262 n n C12 O13 P6G sing 263 n n C12 H121 P6G sing 264 n n C12 H122 P6G sing 265 n n O13 C14 P6G sing 266 n n C14 C15 P6G sing 267 n n C14 H141 P6G sing 268 n n C14 H142 P6G sing 269 n n C15 O16 P6G sing 270 n n C15 H151 P6G sing 271 n n C15 H152 P6G sing 272 n n O16 C17 P6G sing 273 n n C17 C18 P6G sing 274 n n C17 H171 P6G sing 275 n n C17 H172 P6G sing 276 n n C18 O19 P6G sing 277 n n C18 H181 P6G sing 278 n n C18 H182 P6G sing 279 n n O19 H19 P6G sing 280 n n # _atom_sites.entry_id 4ZKO _atom_sites.fract_transf_matrix[1][1] 0.008254 _atom_sites.fract_transf_matrix[1][2] 0.004766 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 U 1 301 2 SO4 SO4 . E 5 P6G U 1 302 1 P6G P6G . F 6 HOH U 1 401 83 HOH HOH . F 6 HOH U 2 402 57 HOH HOH . F 6 HOH U 3 403 71 HOH HOH . F 6 HOH U 4 404 101 HOH HOH . F 6 HOH U 5 405 170 HOH HOH . F 6 HOH U 6 406 168 HOH HOH . F 6 HOH U 7 407 149 HOH HOH . F 6 HOH U 8 408 177 HOH HOH . F 6 HOH U 9 409 184 HOH HOH . F 6 HOH U 10 410 213 HOH HOH . F 6 HOH U 11 411 134 HOH HOH . F 6 HOH U 12 412 49 HOH HOH . F 6 HOH U 13 413 182 HOH HOH . F 6 HOH U 14 414 58 HOH HOH . F 6 HOH U 15 415 17 HOH HOH . F 6 HOH U 16 416 120 HOH HOH . F 6 HOH U 17 417 208 HOH HOH . F 6 HOH U 18 418 94 HOH HOH . F 6 HOH U 19 419 26 HOH HOH . F 6 HOH U 20 420 19 HOH HOH . F 6 HOH U 21 421 29 HOH HOH . F 6 HOH U 22 422 189 HOH HOH . F 6 HOH U 23 423 55 HOH HOH . F 6 HOH U 24 424 84 HOH HOH . F 6 HOH U 25 425 14 HOH HOH . F 6 HOH U 26 426 46 HOH HOH . F 6 HOH U 27 427 72 HOH HOH . F 6 HOH U 28 428 78 HOH HOH . F 6 HOH U 29 429 32 HOH HOH . F 6 HOH U 30 430 81 HOH HOH . F 6 HOH U 31 431 15 HOH HOH . F 6 HOH U 32 432 53 HOH HOH . F 6 HOH U 33 433 37 HOH HOH . F 6 HOH U 34 434 102 HOH HOH . F 6 HOH U 35 435 100 HOH HOH . F 6 HOH U 36 436 60 HOH HOH . F 6 HOH U 37 437 56 HOH HOH . F 6 HOH U 38 438 25 HOH HOH . F 6 HOH U 39 439 130 HOH HOH . F 6 HOH U 40 440 30 HOH HOH . F 6 HOH U 41 441 91 HOH HOH . F 6 HOH U 42 442 64 HOH HOH . F 6 HOH U 43 443 9 HOH HOH . F 6 HOH U 44 444 172 HOH HOH . F 6 HOH U 45 445 36 HOH HOH . F 6 HOH U 46 446 4 HOH HOH . F 6 HOH U 47 447 198 HOH HOH . F 6 HOH U 48 448 99 HOH HOH . F 6 HOH U 49 449 200 HOH HOH . F 6 HOH U 50 450 67 HOH HOH . F 6 HOH U 51 451 21 HOH HOH . F 6 HOH U 52 452 158 HOH HOH . F 6 HOH U 53 453 85 HOH HOH . F 6 HOH U 54 454 38 HOH HOH . F 6 HOH U 55 455 144 HOH HOH . F 6 HOH U 56 456 173 HOH HOH . F 6 HOH U 57 457 52 HOH HOH . F 6 HOH U 58 458 7 HOH HOH . F 6 HOH U 59 459 1 HOH HOH . F 6 HOH U 60 460 51 HOH HOH . F 6 HOH U 61 461 108 HOH HOH . F 6 HOH U 62 462 194 HOH HOH . F 6 HOH U 63 463 20 HOH HOH . F 6 HOH U 64 464 16 HOH HOH . F 6 HOH U 65 465 87 HOH HOH . F 6 HOH U 66 466 145 HOH HOH . F 6 HOH U 67 467 35 HOH HOH . F 6 HOH U 68 468 104 HOH HOH . F 6 HOH U 69 469 28 HOH HOH . F 6 HOH U 70 470 27 HOH HOH . F 6 HOH U 71 471 179 HOH HOH . F 6 HOH U 72 472 203 HOH HOH . F 6 HOH U 73 473 41 HOH HOH . F 6 HOH U 74 474 11 HOH HOH . F 6 HOH U 75 475 93 HOH HOH . F 6 HOH U 76 476 8 HOH HOH . F 6 HOH U 77 477 207 HOH HOH . F 6 HOH U 78 478 127 HOH HOH . F 6 HOH U 79 479 143 HOH HOH . F 6 HOH U 80 480 34 HOH HOH . F 6 HOH U 81 481 86 HOH HOH . F 6 HOH U 82 482 196 HOH HOH . F 6 HOH U 83 483 175 HOH HOH . F 6 HOH U 84 484 59 HOH HOH . F 6 HOH U 85 485 161 HOH HOH . F 6 HOH U 86 486 119 HOH HOH . F 6 HOH U 87 487 171 HOH HOH . F 6 HOH U 88 488 80 HOH HOH . F 6 HOH U 89 489 45 HOH HOH . F 6 HOH U 90 490 181 HOH HOH . F 6 HOH U 91 491 74 HOH HOH . F 6 HOH U 92 492 22 HOH HOH . F 6 HOH U 93 493 88 HOH HOH . F 6 HOH U 94 494 92 HOH HOH . F 6 HOH U 95 495 115 HOH HOH . F 6 HOH U 96 496 166 HOH HOH . F 6 HOH U 97 497 123 HOH HOH . F 6 HOH U 98 498 162 HOH HOH . F 6 HOH U 99 499 23 HOH HOH . F 6 HOH U 100 500 48 HOH HOH . F 6 HOH U 101 501 18 HOH HOH . F 6 HOH U 102 502 54 HOH HOH . F 6 HOH U 103 503 31 HOH HOH . F 6 HOH U 104 504 178 HOH HOH . F 6 HOH U 105 505 98 HOH HOH . F 6 HOH U 106 506 44 HOH HOH . F 6 HOH U 107 507 42 HOH HOH . F 6 HOH U 108 508 70 HOH HOH . F 6 HOH U 109 509 118 HOH HOH . F 6 HOH U 110 510 206 HOH HOH . F 6 HOH U 111 511 33 HOH HOH . F 6 HOH U 112 512 6 HOH HOH . F 6 HOH U 113 513 105 HOH HOH . F 6 HOH U 114 514 156 HOH HOH . F 6 HOH U 115 515 205 HOH HOH . F 6 HOH U 116 516 43 HOH HOH . F 6 HOH U 117 517 89 HOH HOH . F 6 HOH U 118 518 5 HOH HOH . F 6 HOH U 119 519 180 HOH HOH . F 6 HOH U 120 520 13 HOH HOH . F 6 HOH U 121 521 109 HOH HOH . F 6 HOH U 122 522 68 HOH HOH . F 6 HOH U 123 523 126 HOH HOH . F 6 HOH U 124 524 174 HOH HOH . F 6 HOH U 125 525 131 HOH HOH . F 6 HOH U 126 526 2 HOH HOH . F 6 HOH U 127 527 77 HOH HOH . F 6 HOH U 128 528 165 HOH HOH . F 6 HOH U 129 529 95 HOH HOH . F 6 HOH U 130 530 50 HOH HOH . F 6 HOH U 131 531 167 HOH HOH . F 6 HOH U 132 532 96 HOH HOH . F 6 HOH U 133 533 139 HOH HOH . F 6 HOH U 134 534 188 HOH HOH . F 6 HOH U 135 535 110 HOH HOH . F 6 HOH U 136 536 154 HOH HOH . F 6 HOH U 137 537 40 HOH HOH . F 6 HOH U 138 538 142 HOH HOH . F 6 HOH U 139 539 153 HOH HOH . F 6 HOH U 140 540 121 HOH HOH . F 6 HOH U 141 541 201 HOH HOH . F 6 HOH U 142 542 129 HOH HOH . F 6 HOH U 143 543 186 HOH HOH . F 6 HOH U 144 544 69 HOH HOH . F 6 HOH U 145 545 204 HOH HOH . F 6 HOH U 146 546 111 HOH HOH . F 6 HOH U 147 547 191 HOH HOH . F 6 HOH U 148 548 190 HOH HOH . F 6 HOH U 149 549 197 HOH HOH . F 6 HOH U 150 550 193 HOH HOH . F 6 HOH U 151 551 176 HOH HOH . F 6 HOH U 152 552 117 HOH HOH . F 6 HOH U 153 553 65 HOH HOH . F 6 HOH U 154 554 39 HOH HOH . F 6 HOH U 155 555 199 HOH HOH . F 6 HOH U 156 556 141 HOH HOH . F 6 HOH U 157 557 150 HOH HOH . F 6 HOH U 158 558 122 HOH HOH . F 6 HOH U 159 559 211 HOH HOH . F 6 HOH U 160 560 137 HOH HOH . F 6 HOH U 161 561 112 HOH HOH . F 6 HOH U 162 562 106 HOH HOH . F 6 HOH U 163 563 79 HOH HOH . F 6 HOH U 164 564 3 HOH HOH . F 6 HOH U 165 565 169 HOH HOH . F 6 HOH U 166 566 97 HOH HOH . F 6 HOH U 167 567 124 HOH HOH . F 6 HOH U 168 568 12 HOH HOH . F 6 HOH U 169 569 10 HOH HOH . F 6 HOH U 170 570 125 HOH HOH . F 6 HOH U 171 571 62 HOH HOH . F 6 HOH U 172 572 113 HOH HOH . F 6 HOH U 173 573 138 HOH HOH . F 6 HOH U 174 574 133 HOH HOH . F 6 HOH U 175 575 114 HOH HOH . F 6 HOH U 176 576 187 HOH HOH . F 6 HOH U 177 577 24 HOH HOH . F 6 HOH U 178 578 152 HOH HOH . F 6 HOH U 179 579 90 HOH HOH . F 6 HOH U 180 580 135 HOH HOH . F 6 HOH U 181 581 47 HOH HOH . F 6 HOH U 182 582 75 HOH HOH . F 6 HOH U 183 583 163 HOH HOH . F 6 HOH U 184 584 128 HOH HOH . F 6 HOH U 185 585 147 HOH HOH . F 6 HOH U 186 586 82 HOH HOH . F 6 HOH U 187 587 132 HOH HOH . F 6 HOH U 188 588 76 HOH HOH . F 6 HOH U 189 589 63 HOH HOH . F 6 HOH U 190 590 140 HOH HOH . F 6 HOH U 191 591 157 HOH HOH . F 6 HOH U 192 592 202 HOH HOH . F 6 HOH U 193 593 151 HOH HOH . F 6 HOH U 194 594 146 HOH HOH . F 6 HOH U 195 595 185 HOH HOH . F 6 HOH U 196 596 66 HOH HOH . F 6 HOH U 197 597 164 HOH HOH . F 6 HOH U 198 598 103 HOH HOH . F 6 HOH U 199 599 155 HOH HOH . F 6 HOH U 200 600 192 HOH HOH . F 6 HOH U 201 601 160 HOH HOH . F 6 HOH U 202 602 73 HOH HOH . F 6 HOH U 203 603 61 HOH HOH . F 6 HOH U 204 604 107 HOH HOH . F 6 HOH U 205 605 116 HOH HOH . F 6 HOH U 206 606 148 HOH HOH . F 6 HOH U 207 607 159 HOH HOH . F 6 HOH U 208 608 136 HOH HOH . G 6 HOH P 1 101 209 HOH HOH . G 6 HOH P 2 102 212 HOH HOH . G 6 HOH P 3 103 183 HOH HOH . G 6 HOH P 4 104 210 HOH HOH . H 6 HOH Q 1 101 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . E 5 -15.659 -17.312 -5.157 1 46.31 ? O1 P6G 302 U 1 HETATM 2 C C2 P6G . . . E 5 -15.617 -18.615 -4.561 1 46 ? C2 P6G 302 U 1 HETATM 3 C C3 P6G . . . E 5 -14.5 -18.668 -3.524 1 45.78 ? C3 P6G 302 U 1 HETATM 4 O O4 P6G . . . E 5 -14.614 -19.858 -2.746 1 45.41 ? O4 P6G 302 U 1 HETATM 5 C C5 P6G . . . E 5 -14.245 -19.633 -1.387 1 45.52 ? C5 P6G 302 U 1 HETATM 6 C C6 P6G . . . E 5 -13.1 -20.564 -1.004 1 45.6 ? C6 P6G 302 U 1 HETATM 7 O O7 P6G . . . E 5 -11.867 -19.846 -1.046 1 45.8 ? O7 P6G 302 U 1 HETATM 8 C C8 P6G . . . E 5 -10.836 -20.503 -0.309 1 45.8 ? C8 P6G 302 U 1 HETATM 9 C C9 P6G . . . E 5 -9.622 -20.741 -1.202 1 45.87 ? C9 P6G 302 U 1 HETATM 10 O O10 P6G . . . E 5 -9.425 -22.144 -1.386 1 46.21 ? O10 P6G 302 U 1 HETATM 11 C C11 P6G . . . E 5 -8.32 -22.434 -2.242 1 46.42 ? C11 P6G 302 U 1 HETATM 12 C C12 P6G . . . E 5 -8.812 -23.12 -3.512 1 46.47 ? C12 P6G 302 U 1 HETATM 13 O O13 P6G . . . E 5 -8.29 -22.447 -4.657 1 46.73 ? O13 P6G 302 U 1 HETATM 14 C C14 P6G . . . E 5 -9.139 -22.594 -5.795 1 46.49 ? C14 P6G 302 U 1 HETATM 15 C C15 P6G . . . E 5 -8.988 -21.414 -6.753 1 46.37 ? C15 P6G 302 U 1 HETATM 16 O O16 P6G . . . E 5 -8.605 -20.231 -6.056 1 46.39 ? O16 P6G 302 U 1 HETATM 17 C C17 P6G . . . E 5 -9.089 -19.05 -6.693 1 46.41 ? C17 P6G 302 U 1 HETATM 18 C C18 P6G . . . E 5 -8.035 -17.952 -6.597 1 46.5 ? C18 P6G 302 U 1 HETATM 19 O O19 P6G . . . E 5 -8.496 -16.92 -5.717 1 46.38 ? O19 P6G 302 U 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 19 #