data_4ZL1 # _model_server_result.job_id Na5wM1HpekAuMoOm8Dz4fg _model_server_result.datetime_utc '2024-10-12 14:29:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zl1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4ZL1 # _exptl.entry_id 4ZL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZL1 _cell.length_a 91.319 _cell.length_b 91.319 _cell.length_c 122.824 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 319 n y N1 C6 ORO sing 320 n y N1 HN1 ORO sing 321 n n C2 O2 ORO doub 322 n n C2 N3 ORO sing 323 n y N3 C4 ORO sing 324 n y N3 HN3 ORO sing 325 n n C4 O4 ORO doub 326 n n C4 C5 ORO sing 327 n y C5 C6 ORO doub 328 n y C5 H5 ORO sing 329 n n C6 C7 ORO sing 330 n n C7 O71 ORO doub 331 n n C7 O72 ORO sing 332 n n O72 HO7 ORO sing 333 n n # _atom_sites.entry_id 4ZL1 _atom_sites.fract_transf_matrix[1][1] 0.010951 _atom_sites.fract_transf_matrix[1][2] 0.006322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ORO A 1 401 1 ORO ORO . C 3 FMN A 1 402 1 FMN FMN . D 4 18X A 1 403 1 18X 18X . E 5 SO4 A 1 404 2 SO4 SO4 . F 5 SO4 A 1 405 4 SO4 SO4 . G 5 SO4 A 1 406 5 SO4 SO4 . H 5 SO4 A 1 407 6 SO4 SO4 . I 6 HOH A 1 501 44 HOH HOH . I 6 HOH A 2 502 89 HOH HOH . I 6 HOH A 3 503 104 HOH HOH . I 6 HOH A 4 504 159 HOH HOH . I 6 HOH A 5 505 93 HOH HOH . I 6 HOH A 6 506 111 HOH HOH . I 6 HOH A 7 507 96 HOH HOH . I 6 HOH A 8 508 285 HOH HOH . I 6 HOH A 9 509 132 HOH HOH . I 6 HOH A 10 510 55 HOH HOH . I 6 HOH A 11 511 11 HOH HOH . I 6 HOH A 12 512 81 HOH HOH . I 6 HOH A 13 513 64 HOH HOH . I 6 HOH A 14 514 128 HOH HOH . I 6 HOH A 15 515 131 HOH HOH . I 6 HOH A 16 516 162 HOH HOH . I 6 HOH A 17 517 74 HOH HOH . I 6 HOH A 18 518 145 HOH HOH . I 6 HOH A 19 519 123 HOH HOH . I 6 HOH A 20 520 120 HOH HOH . I 6 HOH A 21 521 119 HOH HOH . I 6 HOH A 22 522 32 HOH HOH . I 6 HOH A 23 523 77 HOH HOH . I 6 HOH A 24 524 5 HOH HOH . I 6 HOH A 25 525 142 HOH HOH . I 6 HOH A 26 526 161 HOH HOH . I 6 HOH A 27 527 50 HOH HOH . I 6 HOH A 28 528 51 HOH HOH . I 6 HOH A 29 529 179 HOH HOH . I 6 HOH A 30 530 148 HOH HOH . I 6 HOH A 31 531 257 HOH HOH . I 6 HOH A 32 532 91 HOH HOH . I 6 HOH A 33 533 8 HOH HOH . I 6 HOH A 34 534 20 HOH HOH . I 6 HOH A 35 535 67 HOH HOH . I 6 HOH A 36 536 14 HOH HOH . I 6 HOH A 37 537 140 HOH HOH . I 6 HOH A 38 538 216 HOH HOH . I 6 HOH A 39 539 288 HOH HOH . I 6 HOH A 40 540 72 HOH HOH . I 6 HOH A 41 541 18 HOH HOH . I 6 HOH A 42 542 33 HOH HOH . I 6 HOH A 43 543 84 HOH HOH . I 6 HOH A 44 544 204 HOH HOH . I 6 HOH A 45 545 153 HOH HOH . I 6 HOH A 46 546 105 HOH HOH . I 6 HOH A 47 547 106 HOH HOH . I 6 HOH A 48 548 177 HOH HOH . I 6 HOH A 49 549 40 HOH HOH . I 6 HOH A 50 550 291 HOH HOH . I 6 HOH A 51 551 62 HOH HOH . I 6 HOH A 52 552 66 HOH HOH . I 6 HOH A 53 553 116 HOH HOH . I 6 HOH A 54 554 149 HOH HOH . I 6 HOH A 55 555 54 HOH HOH . I 6 HOH A 56 556 29 HOH HOH . I 6 HOH A 57 557 112 HOH HOH . I 6 HOH A 58 558 86 HOH HOH . I 6 HOH A 59 559 98 HOH HOH . I 6 HOH A 60 560 21 HOH HOH . I 6 HOH A 61 561 125 HOH HOH . I 6 HOH A 62 562 176 HOH HOH . I 6 HOH A 63 563 47 HOH HOH . I 6 HOH A 64 564 190 HOH HOH . I 6 HOH A 65 565 263 HOH HOH . I 6 HOH A 66 566 41 HOH HOH . I 6 HOH A 67 567 53 HOH HOH . I 6 HOH A 68 568 115 HOH HOH . I 6 HOH A 69 569 15 HOH HOH . I 6 HOH A 70 570 88 HOH HOH . I 6 HOH A 71 571 57 HOH HOH . I 6 HOH A 72 572 90 HOH HOH . I 6 HOH A 73 573 19 HOH HOH . I 6 HOH A 74 574 17 HOH HOH . I 6 HOH A 75 575 228 HOH HOH . I 6 HOH A 76 576 58 HOH HOH . I 6 HOH A 77 577 87 HOH HOH . I 6 HOH A 78 578 25 HOH HOH . I 6 HOH A 79 579 196 HOH HOH . I 6 HOH A 80 580 97 HOH HOH . I 6 HOH A 81 581 126 HOH HOH . I 6 HOH A 82 582 80 HOH HOH . I 6 HOH A 83 583 35 HOH HOH . I 6 HOH A 84 584 3 HOH HOH . I 6 HOH A 85 585 193 HOH HOH . I 6 HOH A 86 586 23 HOH HOH . I 6 HOH A 87 587 34 HOH HOH . I 6 HOH A 88 588 109 HOH HOH . I 6 HOH A 89 589 79 HOH HOH . I 6 HOH A 90 590 135 HOH HOH . I 6 HOH A 91 591 169 HOH HOH . I 6 HOH A 92 592 65 HOH HOH . I 6 HOH A 93 593 22 HOH HOH . I 6 HOH A 94 594 215 HOH HOH . I 6 HOH A 95 595 27 HOH HOH . I 6 HOH A 96 596 82 HOH HOH . I 6 HOH A 97 597 279 HOH HOH . I 6 HOH A 98 598 213 HOH HOH . I 6 HOH A 99 599 30 HOH HOH . I 6 HOH A 100 600 48 HOH HOH . I 6 HOH A 101 601 39 HOH HOH . I 6 HOH A 102 602 49 HOH HOH . I 6 HOH A 103 603 117 HOH HOH . I 6 HOH A 104 604 127 HOH HOH . I 6 HOH A 105 605 13 HOH HOH . I 6 HOH A 106 606 232 HOH HOH . I 6 HOH A 107 607 2 HOH HOH . I 6 HOH A 108 608 268 HOH HOH . I 6 HOH A 109 609 292 HOH HOH . I 6 HOH A 110 610 137 HOH HOH . I 6 HOH A 111 611 101 HOH HOH . I 6 HOH A 112 612 28 HOH HOH . I 6 HOH A 113 613 170 HOH HOH . I 6 HOH A 114 614 42 HOH HOH . I 6 HOH A 115 615 278 HOH HOH . I 6 HOH A 116 616 220 HOH HOH . I 6 HOH A 117 617 52 HOH HOH . I 6 HOH A 118 618 231 HOH HOH . I 6 HOH A 119 619 244 HOH HOH . I 6 HOH A 120 620 141 HOH HOH . I 6 HOH A 121 621 203 HOH HOH . I 6 HOH A 122 622 157 HOH HOH . I 6 HOH A 123 623 130 HOH HOH . I 6 HOH A 124 624 68 HOH HOH . I 6 HOH A 125 625 85 HOH HOH . I 6 HOH A 126 626 46 HOH HOH . I 6 HOH A 127 627 100 HOH HOH . I 6 HOH A 128 628 94 HOH HOH . I 6 HOH A 129 629 63 HOH HOH . I 6 HOH A 130 630 9 HOH HOH . I 6 HOH A 131 631 24 HOH HOH . I 6 HOH A 132 632 144 HOH HOH . I 6 HOH A 133 633 83 HOH HOH . I 6 HOH A 134 634 102 HOH HOH . I 6 HOH A 135 635 38 HOH HOH . I 6 HOH A 136 636 31 HOH HOH . I 6 HOH A 137 637 175 HOH HOH . I 6 HOH A 138 638 152 HOH HOH . I 6 HOH A 139 639 4 HOH HOH . I 6 HOH A 140 640 107 HOH HOH . I 6 HOH A 141 641 70 HOH HOH . I 6 HOH A 142 642 133 HOH HOH . I 6 HOH A 143 643 174 HOH HOH . I 6 HOH A 144 644 37 HOH HOH . I 6 HOH A 145 645 129 HOH HOH . I 6 HOH A 146 646 12 HOH HOH . I 6 HOH A 147 647 16 HOH HOH . I 6 HOH A 148 648 10 HOH HOH . I 6 HOH A 149 649 151 HOH HOH . I 6 HOH A 150 650 197 HOH HOH . I 6 HOH A 151 651 202 HOH HOH . I 6 HOH A 152 652 110 HOH HOH . I 6 HOH A 153 653 113 HOH HOH . I 6 HOH A 154 654 194 HOH HOH . I 6 HOH A 155 655 7 HOH HOH . I 6 HOH A 156 656 108 HOH HOH . I 6 HOH A 157 657 156 HOH HOH . I 6 HOH A 158 658 183 HOH HOH . I 6 HOH A 159 659 56 HOH HOH . I 6 HOH A 160 660 184 HOH HOH . I 6 HOH A 161 661 69 HOH HOH . I 6 HOH A 162 662 139 HOH HOH . I 6 HOH A 163 663 143 HOH HOH . I 6 HOH A 164 664 73 HOH HOH . I 6 HOH A 165 665 103 HOH HOH . I 6 HOH A 166 666 45 HOH HOH . I 6 HOH A 167 667 71 HOH HOH . I 6 HOH A 168 668 99 HOH HOH . I 6 HOH A 169 669 150 HOH HOH . I 6 HOH A 170 670 43 HOH HOH . I 6 HOH A 171 671 212 HOH HOH . I 6 HOH A 172 672 121 HOH HOH . I 6 HOH A 173 673 245 HOH HOH . I 6 HOH A 174 674 75 HOH HOH . I 6 HOH A 175 675 155 HOH HOH . I 6 HOH A 176 676 36 HOH HOH . I 6 HOH A 177 677 205 HOH HOH . I 6 HOH A 178 678 186 HOH HOH . I 6 HOH A 179 679 209 HOH HOH . I 6 HOH A 180 680 280 HOH HOH . I 6 HOH A 181 681 166 HOH HOH . I 6 HOH A 182 682 211 HOH HOH . I 6 HOH A 183 683 290 HOH HOH . I 6 HOH A 184 684 277 HOH HOH . I 6 HOH A 185 685 206 HOH HOH . I 6 HOH A 186 686 218 HOH HOH . I 6 HOH A 187 687 59 HOH HOH . I 6 HOH A 188 688 217 HOH HOH . I 6 HOH A 189 689 164 HOH HOH . I 6 HOH A 190 690 242 HOH HOH . I 6 HOH A 191 691 146 HOH HOH . I 6 HOH A 192 692 236 HOH HOH . I 6 HOH A 193 693 258 HOH HOH . I 6 HOH A 194 694 233 HOH HOH . I 6 HOH A 195 695 201 HOH HOH . I 6 HOH A 196 696 92 HOH HOH . I 6 HOH A 197 697 138 HOH HOH . I 6 HOH A 198 698 219 HOH HOH . I 6 HOH A 199 699 167 HOH HOH . I 6 HOH A 200 700 246 HOH HOH . I 6 HOH A 201 701 163 HOH HOH . I 6 HOH A 202 702 222 HOH HOH . I 6 HOH A 203 703 207 HOH HOH . I 6 HOH A 204 704 122 HOH HOH . I 6 HOH A 205 705 154 HOH HOH . I 6 HOH A 206 706 187 HOH HOH . I 6 HOH A 207 707 134 HOH HOH . I 6 HOH A 208 708 221 HOH HOH . I 6 HOH A 209 709 136 HOH HOH . I 6 HOH A 210 710 182 HOH HOH . I 6 HOH A 211 711 192 HOH HOH . I 6 HOH A 212 712 95 HOH HOH . I 6 HOH A 213 713 178 HOH HOH . I 6 HOH A 214 714 76 HOH HOH . I 6 HOH A 215 715 124 HOH HOH . I 6 HOH A 216 716 114 HOH HOH . I 6 HOH A 217 717 234 HOH HOH . I 6 HOH A 218 718 188 HOH HOH . I 6 HOH A 219 719 172 HOH HOH . I 6 HOH A 220 720 235 HOH HOH . I 6 HOH A 221 721 118 HOH HOH . I 6 HOH A 222 722 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . B 2 41.802 -19.877 15.632 1 11.98 ? N1 ORO 401 A 1 HETATM 2 C C2 ORO . . . B 2 41.565 -18.603 15.246 1 13.35 ? C2 ORO 401 A 1 HETATM 3 O O2 ORO . . . B 2 41.332 -17.763 16.134 1 12.43 ? O2 ORO 401 A 1 HETATM 4 N N3 ORO . . . B 2 41.625 -18.311 13.932 1 12.67 ? N3 ORO 401 A 1 HETATM 5 C C4 ORO . . . B 2 41.883 -19.237 13.003 1 12.48 ? C4 ORO 401 A 1 HETATM 6 O O4 ORO . . . B 2 41.966 -18.869 11.804 1 12.02 ? O4 ORO 401 A 1 HETATM 7 C C5 ORO . . . B 2 42.098 -20.572 13.419 1 11.93 ? C5 ORO 401 A 1 HETATM 8 C C6 ORO . . . B 2 41.999 -20.861 14.747 1 12.83 ? C6 ORO 401 A 1 HETATM 9 C C7 ORO . . . B 2 42.402 -22.2 15.263 1 15.73 ? C7 ORO 401 A 1 HETATM 10 O O71 ORO . . . B 2 42.094 -23.257 14.647 1 16.17 ? O71 ORO 401 A 1 HETATM 11 O O72 ORO . . . B 2 43.199 -22.169 16.243 1 13.96 ? O72 ORO 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #