data_4ZNU # _model_server_result.job_id vJ1YlJ6mSH1p-XdQBHEhig _model_server_result.datetime_utc '2025-02-18 17:36:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4znu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 4ZNU # _exptl.entry_id 4ZNU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 450.504 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-methylphenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.05 _cell.angle_gamma 90 _cell.entry_id 4ZNU _cell.length_a 55.96 _cell.length_b 82.27 _cell.length_c 58.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZNU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C25 H22 O6 S' _chem_comp.formula_weight 450.504 _chem_comp.id 4Q9 _chem_comp.mon_nstd_flag . _chem_comp.name '2-methylphenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 S02 4Q9 doub 1 n n S02 C03 4Q9 sing 2 n n S02 O24 4Q9 sing 3 n n S02 O32 4Q9 doub 4 n n C03 C04 4Q9 sing 5 n n C03 C23 4Q9 sing 6 n n C04 C05 4Q9 sing 7 n n C05 C06 4Q9 sing 8 n n C05 C13 4Q9 doub 9 n n C06 C07 4Q9 doub 10 n y C06 C12 4Q9 sing 11 n y C07 C08 4Q9 sing 12 n y C08 C09 4Q9 doub 13 n y C09 O10 4Q9 sing 14 n n C09 C11 4Q9 sing 15 n y C11 C12 4Q9 doub 16 n y C13 C14 4Q9 sing 17 n n C13 C21 4Q9 sing 18 n n C14 C15 4Q9 doub 19 n y C14 C20 4Q9 sing 20 n y C15 C16 4Q9 sing 21 n y C16 C17 4Q9 doub 22 n y C17 O18 4Q9 sing 23 n n C17 C19 4Q9 sing 24 n y C19 C20 4Q9 doub 25 n y C21 C23 4Q9 sing 26 n n O24 C25 4Q9 sing 27 n n C25 C26 4Q9 doub 28 n y C25 C30 4Q9 sing 29 n y C26 C27 4Q9 sing 30 n y C27 C28 4Q9 doub 31 n y C28 C29 4Q9 sing 32 n y C29 C30 4Q9 doub 33 n y C30 C31 4Q9 sing 34 n n C04 O22 4Q9 sing 35 n n C03 H1 4Q9 sing 36 n n C04 H2 4Q9 sing 37 n n C07 H3 4Q9 sing 38 n n C08 H4 4Q9 sing 39 n n O10 H5 4Q9 sing 40 n n C11 H6 4Q9 sing 41 n n C12 H7 4Q9 sing 42 n n C15 H8 4Q9 sing 43 n n C16 H9 4Q9 sing 44 n n O18 H10 4Q9 sing 45 n n C19 H11 4Q9 sing 46 n n C20 H12 4Q9 sing 47 n n C21 H13 4Q9 sing 48 n n C23 H16 4Q9 sing 49 n n C23 H17 4Q9 sing 50 n n C26 H18 4Q9 sing 51 n n C27 H19 4Q9 sing 52 n n C28 H20 4Q9 sing 53 n n C29 H21 4Q9 sing 54 n n C31 H22 4Q9 sing 55 n n C31 H23 4Q9 sing 56 n n C31 H24 4Q9 sing 57 n n O22 C21 4Q9 sing 58 n n # _atom_sites.entry_id 4ZNU _atom_sites.fract_transf_matrix[1][1] 0.01787 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006878 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 4Q9 A 1 601 1 4Q9 OMB . F 3 4Q9 B 1 601 2 4Q9 OMB . G 4 HOH A 1 701 34 HOH HOH . G 4 HOH A 2 702 19 HOH HOH . G 4 HOH A 3 703 10 HOH HOH . G 4 HOH A 4 704 4 HOH HOH . G 4 HOH A 5 705 16 HOH HOH . G 4 HOH A 6 706 14 HOH HOH . G 4 HOH A 7 707 9 HOH HOH . G 4 HOH A 8 708 27 HOH HOH . G 4 HOH A 9 709 35 HOH HOH . G 4 HOH A 10 710 33 HOH HOH . G 4 HOH A 11 711 21 HOH HOH . G 4 HOH A 12 712 26 HOH HOH . G 4 HOH A 13 713 32 HOH HOH . G 4 HOH A 14 714 8 HOH HOH . G 4 HOH A 15 715 6 HOH HOH . G 4 HOH A 16 716 36 HOH HOH . G 4 HOH A 17 717 20 HOH HOH . G 4 HOH A 18 718 39 HOH HOH . G 4 HOH A 19 719 22 HOH HOH . G 4 HOH A 20 720 40 HOH HOH . G 4 HOH A 21 721 28 HOH HOH . G 4 HOH A 22 722 15 HOH HOH . H 4 HOH B 1 701 38 HOH HOH . H 4 HOH B 2 702 2 HOH HOH . H 4 HOH B 3 703 7 HOH HOH . H 4 HOH B 4 704 25 HOH HOH . H 4 HOH B 5 705 31 HOH HOH . H 4 HOH B 6 706 5 HOH HOH . H 4 HOH B 7 707 12 HOH HOH . H 4 HOH B 8 708 11 HOH HOH . H 4 HOH B 9 709 3 HOH HOH . H 4 HOH B 10 710 29 HOH HOH . H 4 HOH B 11 711 1 HOH HOH . H 4 HOH B 12 712 30 HOH HOH . H 4 HOH B 13 713 37 HOH HOH . H 4 HOH B 14 714 13 HOH HOH . H 4 HOH B 15 715 24 HOH HOH . H 4 HOH B 16 716 17 HOH HOH . H 4 HOH B 17 717 23 HOH HOH . H 4 HOH B 18 718 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 4Q9 . . . F 3 -10.942 -7.331 45.466 1 62 ? O01 4Q9 601 B 1 HETATM 2 S S02 4Q9 . . . F 3 -11.319 -5.951 45.404 1 63.36 ? S02 4Q9 601 B 1 HETATM 3 C C03 4Q9 . . . F 3 -11.254 -5.113 47.223 1 59.55 ? C03 4Q9 601 B 1 HETATM 4 C C04 4Q9 . . . F 3 -12.245 -5.496 47.928 1 59.5 ? C04 4Q9 601 B 1 HETATM 5 C C05 4Q9 . . . F 3 -12.344 -4.647 48.961 1 60.25 ? C05 4Q9 601 B 1 HETATM 6 C C06 4Q9 . . . F 3 -13.575 -3.774 49.161 1 62.12 ? C06 4Q9 601 B 1 HETATM 7 C C07 4Q9 . . . F 3 -13.916 -2.436 49.368 1 63.07 ? C07 4Q9 601 B 1 HETATM 8 C C08 4Q9 . . . F 3 -15.265 -2.065 49.444 1 64.04 ? C08 4Q9 601 B 1 HETATM 9 C C09 4Q9 . . . F 3 -16.266 -3.023 49.299 1 65.24 ? C09 4Q9 601 B 1 HETATM 10 O O10 4Q9 . . . F 3 -17.599 -2.649 49.38 1 67.12 ? O10 4Q9 601 B 1 HETATM 11 C C11 4Q9 . . . F 3 -15.926 -4.357 49.07 1 63.65 ? C11 4Q9 601 B 1 HETATM 12 C C12 4Q9 . . . F 3 -14.578 -4.727 48.995 1 62.83 ? C12 4Q9 601 B 1 HETATM 13 C C13 4Q9 . . . F 3 -11.064 -4.742 49.694 1 58.89 ? C13 4Q9 601 B 1 HETATM 14 C C14 4Q9 . . . F 3 -10.541 -3.99 50.901 1 56.26 ? C14 4Q9 601 B 1 HETATM 15 C C15 4Q9 . . . F 3 -11.589 -3.807 51.798 1 55.7 ? C15 4Q9 601 B 1 HETATM 16 C C16 4Q9 . . . F 3 -11.343 -3.123 52.997 1 54.75 ? C16 4Q9 601 B 1 HETATM 17 C C17 4Q9 . . . F 3 -10.068 -2.638 53.287 1 54.22 ? C17 4Q9 601 B 1 HETATM 18 O O18 4Q9 . . . F 3 -9.802 -1.965 54.462 1 54.36 ? O18 4Q9 601 B 1 HETATM 19 C C19 4Q9 . . . F 3 -9.029 -2.827 52.389 1 54.33 ? C19 4Q9 601 B 1 HETATM 20 C C20 4Q9 . . . F 3 -9.275 -3.496 51.2 1 55.05 ? C20 4Q9 601 B 1 HETATM 21 C C21 4Q9 . . . F 3 -10.295 -5.676 49.039 1 59.29 ? C21 4Q9 601 B 1 HETATM 22 O O22 4Q9 . . . F 3 -11.514 -6.767 48.691 1 52.52 ? O22 4Q9 601 B 1 HETATM 23 C C23 4Q9 . . . F 3 -10.077 -5.413 47.846 1 59.51 ? C23 4Q9 601 B 1 HETATM 24 O O24 4Q9 . . . F 3 -12.654 -5.743 44.801 1 67.12 ? O24 4Q9 601 B 1 HETATM 25 C C25 4Q9 . . . F 3 -13.457 -6.837 44.433 1 70.98 ? C25 4Q9 601 B 1 HETATM 26 C C26 4Q9 . . . F 3 -14.466 -7.245 45.292 1 72.52 ? C26 4Q9 601 B 1 HETATM 27 C C27 4Q9 . . . F 3 -15.276 -8.326 44.949 1 73.52 ? C27 4Q9 601 B 1 HETATM 28 C C28 4Q9 . . . F 3 -15.08 -8.998 43.748 1 73.61 ? C28 4Q9 601 B 1 HETATM 29 C C29 4Q9 . . . F 3 -14.071 -8.593 42.882 1 73.16 ? C29 4Q9 601 B 1 HETATM 30 C C30 4Q9 . . . F 3 -13.263 -7.517 43.219 1 72.76 ? C30 4Q9 601 B 1 HETATM 31 C C31 4Q9 . . . F 3 -12.19 -7.107 42.265 1 73.46 ? C31 4Q9 601 B 1 HETATM 32 O O32 4Q9 . . . F 3 -10.285 -5.382 44.562 1 63.58 ? O32 4Q9 601 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #