data_4ZO5 # _model_server_result.job_id FNtYCh3xUTVEVOAorBu1oQ _model_server_result.datetime_utc '2024-11-22 19:47:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zo5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":803}' # _entry.id 4ZO5 # _exptl.entry_id 4ZO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.515 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[3-(4-methoxyphenyl)-4-oxo-3,4-dihydroquinazolin-2-yl]ethyl}-4-(propan-2-yloxy)-1H-isoindole-1,3(2H)-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZO5 _cell.length_a 51.07 _cell.length_b 81.38 _cell.length_c 159.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 519 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc2 A NE2 HIS 117 A HIS 553 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc3 A OD2 ASP 118 A ASP 554 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc4 A OD1 ASP 118 A ASP 554 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc5 A OD1 ASP 228 A ASP 664 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc6 C ZN ZN . A ZN 801 1_555 I O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc7 D MG MG . A MG 802 1_555 I O HOH . A HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc8 D MG MG . A MG 802 1_555 I O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc9 D MG MG . A MG 802 1_555 I O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc10 D MG MG . A MG 802 1_555 I O HOH . A HOH 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc11 B NE2 HIS 83 B HIS 519 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc12 B NE2 HIS 117 B HIS 553 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc13 B OD2 ASP 118 B ASP 554 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc14 B OD1 ASP 118 B ASP 554 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc15 B OE2 GLU 146 B GLU 582 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc16 B OD1 ASP 228 B ASP 664 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc17 F ZN ZN . B ZN 801 1_555 J O HOH . B HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc18 G MG MG . B MG 802 1_555 J O HOH . B HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc19 G MG MG . B MG 802 1_555 J O HOH . B HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc20 G MG MG . B MG 802 1_555 J O HOH . B HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? # _chem_comp.formula 'C28 H25 N3 O5' _chem_comp.formula_weight 483.515 _chem_comp.id 4Q0 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[3-(4-methoxyphenyl)-4-oxo-3,4-dihydroquinazolin-2-yl]ethyl}-4-(propan-2-yloxy)-1H-isoindole-1,3(2H)-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C32 C31 4Q0 sing 48 n n C33 C31 4Q0 sing 49 n n C31 O30 4Q0 sing 50 n n O30 C27 4Q0 sing 51 n n C27 C26 4Q0 doub 52 n y C27 C22 4Q0 sing 53 n y C26 C25 4Q0 sing 54 n y O28 C23 4Q0 doub 55 n n C22 C23 4Q0 sing 56 n n C22 C21 4Q0 doub 57 n y C25 C24 4Q0 doub 58 n y C23 N19 4Q0 sing 59 n n C21 C24 4Q0 sing 60 n y C21 C20 4Q0 sing 61 n n N19 C20 4Q0 sing 62 n n N19 C11 4Q0 sing 63 n n C20 O29 4Q0 doub 64 n n C10 C11 4Q0 sing 65 n n C10 C6 4Q0 sing 66 n n N C6 4Q0 doub 67 n n N C3 4Q0 sing 68 n n C6 N7 4Q0 sing 69 n n C2 C3 4Q0 doub 70 n y C2 C1 4Q0 sing 71 n y C3 C4 4Q0 sing 72 n y C16 C15 4Q0 doub 73 n y C16 C9 4Q0 sing 74 n y N7 C9 4Q0 sing 75 n n N7 C8 4Q0 sing 76 n n C15 C14 4Q0 sing 77 n y C1 C 4Q0 doub 78 n y C9 C12 4Q0 doub 79 n y C14 O17 4Q0 sing 80 n n C14 C13 4Q0 doub 81 n y C12 C13 4Q0 sing 82 n y C4 C8 4Q0 sing 83 n n C4 C5 4Q0 doub 84 n y O17 C18 4Q0 sing 85 n n C8 O 4Q0 doub 86 n n C C5 4Q0 sing 87 n y C2 H1 4Q0 sing 88 n n C5 H2 4Q0 sing 89 n n C10 H3 4Q0 sing 90 n n C10 H4 4Q0 sing 91 n n C11 H5 4Q0 sing 92 n n C11 H6 4Q0 sing 93 n n C12 H7 4Q0 sing 94 n n C13 H8 4Q0 sing 95 n n C15 H9 4Q0 sing 96 n n C18 H10 4Q0 sing 97 n n C18 H11 4Q0 sing 98 n n C18 H12 4Q0 sing 99 n n C H13 4Q0 sing 100 n n C1 H14 4Q0 sing 101 n n C16 H15 4Q0 sing 102 n n C24 H16 4Q0 sing 103 n n C25 H17 4Q0 sing 104 n n C26 H18 4Q0 sing 105 n n C31 H19 4Q0 sing 106 n n C32 H20 4Q0 sing 107 n n C32 H21 4Q0 sing 108 n n C32 H22 4Q0 sing 109 n n C33 H23 4Q0 sing 110 n n C33 H24 4Q0 sing 111 n n C33 H25 4Q0 sing 112 n n # _atom_sites.entry_id 4ZO5 _atom_sites.fract_transf_matrix[1][1] 0.019581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 801 1 ZN ZN . D 3 MG A 1 802 2 MG MG . E 4 4PX A 1 803 1 4PX MMK . F 2 ZN B 1 801 3 ZN ZN . G 3 MG B 1 802 4 MG MG . H 5 4Q0 B 1 803 1 4Q0 MRK . I 6 HOH A 1 901 14 HOH HOH . I 6 HOH A 2 902 16 HOH HOH . I 6 HOH A 3 903 15 HOH HOH . I 6 HOH A 4 904 8 HOH HOH . I 6 HOH A 5 905 2 HOH HOH . I 6 HOH A 6 906 4 HOH HOH . I 6 HOH A 7 907 17 HOH HOH . I 6 HOH A 8 908 1 HOH HOH . I 6 HOH A 9 909 9 HOH HOH . I 6 HOH A 10 910 13 HOH HOH . I 6 HOH A 11 911 12 HOH HOH . I 6 HOH A 12 912 5 HOH HOH . I 6 HOH A 13 913 22 HOH HOH . I 6 HOH A 14 914 7 HOH HOH . J 6 HOH B 1 901 21 HOH HOH . J 6 HOH B 2 902 19 HOH HOH . J 6 HOH B 3 903 20 HOH HOH . J 6 HOH B 4 904 3 HOH HOH . J 6 HOH B 5 905 18 HOH HOH . J 6 HOH B 6 906 6 HOH HOH . J 6 HOH B 7 907 11 HOH HOH . J 6 HOH B 8 908 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 4Q0 . . . H 5 -0.232 -4.642 23.419 1 55.75 ? C2 4Q0 803 B 1 HETATM 2 C C3 4Q0 . . . H 5 -1.516 -5.072 23.701 1 56.62 ? C3 4Q0 803 B 1 HETATM 3 C C5 4Q0 . . . H 5 -0.776 -5.807 25.877 1 52.57 ? C5 4Q0 803 B 1 HETATM 4 C C9 4Q0 . . . H 5 -5.325 -6.552 24.384 1 53.5 ? C9 4Q0 803 B 1 HETATM 5 C C10 4Q0 . . . H 5 -4.754 -5.09 21.95 1 55.39 ? C10 4Q0 803 B 1 HETATM 6 C C11 4Q0 . . . H 5 -5.02 -3.593 21.994 1 53.98 ? C11 4Q0 803 B 1 HETATM 7 C C12 4Q0 . . . H 5 -6.399 -5.837 24.89 1 51.34 ? C12 4Q0 803 B 1 HETATM 8 C C13 4Q0 . . . H 5 -7.612 -6.471 25.099 1 49.92 ? C13 4Q0 803 B 1 HETATM 9 C C15 4Q0 . . . H 5 -6.651 -8.544 24.319 1 49.36 ? C15 4Q0 803 B 1 HETATM 10 C C18 4Q0 . . . H 5 -9.762 -7.878 25.944 1 42.78 ? C18 4Q0 803 B 1 HETATM 11 N N19 4Q0 . . . H 5 -6.195 -3.185 21.261 1 50.44 ? N19 4Q0 803 B 1 HETATM 12 C C20 4Q0 . . . H 5 -7.391 -2.871 21.88 1 45.46 ? C20 4Q0 803 B 1 HETATM 13 C C21 4Q0 . . . H 5 -8.25 -2.49 20.77 1 43.87 ? C21 4Q0 803 B 1 HETATM 14 C C22 4Q0 . . . H 5 -7.574 -2.636 19.589 1 48.35 ? C22 4Q0 803 B 1 HETATM 15 C C 4Q0 . . . H 5 0.503 -5.372 25.59 1 50.51 ? C 4Q0 803 B 1 HETATM 16 N N 4Q0 . . . H 5 -2.511 -4.901 22.736 1 57.26 ? N 4Q0 803 B 1 HETATM 17 O O 4Q0 . . . H 5 -3.399 -6.612 26.335 1 58.38 ? O 4Q0 803 B 1 HETATM 18 C C1 4Q0 . . . H 5 0.767 -4.788 24.367 1 54.61 ? C1 4Q0 803 B 1 HETATM 19 C C4 4Q0 . . . H 5 -1.779 -5.646 24.935 1 56.54 ? C4 4Q0 803 B 1 HETATM 20 C C6 4Q0 . . . H 5 -3.712 -5.312 23.004 1 56.3 ? C6 4Q0 803 B 1 HETATM 21 N N7 4Q0 . . . H 5 -4.085 -5.904 24.211 1 55.84 ? N7 4Q0 803 B 1 HETATM 22 C C8 4Q0 . . . H 5 -3.159 -6.1 25.24 1 58.37 ? C8 4Q0 803 B 1 HETATM 23 C C14 4Q0 . . . H 5 -7.73 -7.831 24.825 1 47.87 ? C14 4Q0 803 B 1 HETATM 24 C C16 4Q0 . . . H 5 -5.444 -7.906 24.094 1 52.19 ? C16 4Q0 803 B 1 HETATM 25 O O17 4Q0 . . . H 5 -8.913 -8.545 25.016 1 43.61 ? O17 4Q0 803 B 1 HETATM 26 C C23 4Q0 . . . H 5 -6.214 -3.087 19.878 1 53.12 ? C23 4Q0 803 B 1 HETATM 27 C C24 4Q0 . . . H 5 -9.562 -2.069 20.817 1 42.07 ? C24 4Q0 803 B 1 HETATM 28 C C25 4Q0 . . . H 5 -10.163 -1.773 19.602 1 40.39 ? C25 4Q0 803 B 1 HETATM 29 C C26 4Q0 . . . H 5 -9.478 -1.909 18.411 1 40.8 ? C26 4Q0 803 B 1 HETATM 30 C C27 4Q0 . . . H 5 -8.161 -2.353 18.372 1 47.05 ? C27 4Q0 803 B 1 HETATM 31 O O28 4Q0 . . . H 5 -5.328 -3.27 19.044 1 55.98 ? O28 4Q0 803 B 1 HETATM 32 O O29 4Q0 . . . H 5 -7.751 -2.943 23.056 1 43.78 ? O29 4Q0 803 B 1 HETATM 33 O O30 4Q0 . . . H 5 -7.416 -2.55 17.194 1 53.07 ? O30 4Q0 803 B 1 HETATM 34 C C31 4Q0 . . . H 5 -8.054 -2.018 16.006 1 56.64 ? C31 4Q0 803 B 1 HETATM 35 C C32 4Q0 . . . H 5 -6.983 -1.588 15.03 1 57.28 ? C32 4Q0 803 B 1 HETATM 36 C C33 4Q0 . . . H 5 -8.937 -3.022 15.288 1 56.17 ? C33 4Q0 803 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #