data_4ZOG # _model_server_result.job_id KqAIXPD9ig7tjsUa8XoXWA _model_server_result.datetime_utc '2024-11-22 11:53:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4ZOG # _exptl.entry_id 4ZOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 464.586 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZOG _cell.length_a 105.937 _cell.length_b 132.425 _cell.length_c 56.551 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C23 H28 N8 O S' _chem_comp.formula_weight 464.586 _chem_comp.id VX6 _chem_comp.mon_nstd_flag . _chem_comp.name 'CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 VX6 sing 413 n n N1 C6 VX6 sing 414 n n N1 C7 VX6 sing 415 n n C2 C3 VX6 sing 416 n n C2 H21 VX6 sing 417 n n C2 H22 VX6 sing 418 n n C3 N4 VX6 sing 419 n n C3 H31 VX6 sing 420 n n C3 H32 VX6 sing 421 n n N4 C5 VX6 sing 422 n n N4 C8 VX6 sing 423 n n C5 C6 VX6 sing 424 n n C5 H51 VX6 sing 425 n n C5 H52 VX6 sing 426 n n C6 H61 VX6 sing 427 n n C6 H62 VX6 sing 428 n n C7 H71 VX6 sing 429 n n C7 H72 VX6 sing 430 n n C7 H73 VX6 sing 431 n n C8 C9 VX6 sing 432 n y C8 N13 VX6 doub 433 n y C9 C10 VX6 doub 434 n y C9 H9 VX6 sing 435 n n C10 N11 VX6 sing 436 n y C10 N14 VX6 sing 437 n n N11 C12 VX6 doub 438 n y C12 N13 VX6 sing 439 n y C12 S23 VX6 sing 440 n n N14 C15 VX6 sing 441 n n N14 H14 VX6 sing 442 n n C15 C17 VX6 doub 443 n y C15 N20 VX6 sing 444 n y C17 C18 VX6 sing 445 n y C17 H17 VX6 sing 446 n n C18 N19 VX6 doub 447 n y C18 C21 VX6 sing 448 n n N19 N20 VX6 sing 449 n y N20 H20 VX6 sing 450 n n C21 H211 VX6 sing 451 n n C21 H212 VX6 sing 452 n n C21 H213 VX6 sing 453 n n S23 C24 VX6 sing 454 n n C24 C25 VX6 sing 455 n y C24 C29 VX6 doub 456 n y C25 C26 VX6 doub 457 n y C25 H25 VX6 sing 458 n n C26 C27 VX6 sing 459 n y C26 H26 VX6 sing 460 n n C27 C28 VX6 doub 461 n y C27 N30 VX6 sing 462 n n C28 C29 VX6 sing 463 n y C28 H28 VX6 sing 464 n n C29 H29 VX6 sing 465 n n N30 C31 VX6 sing 466 n n N30 H30 VX6 sing 467 n n C31 O32 VX6 doub 468 n n C31 C33 VX6 sing 469 n n C33 C34 VX6 sing 470 n n C33 C35 VX6 sing 471 n n C33 H33 VX6 sing 472 n n C34 C35 VX6 sing 473 n n C34 H341 VX6 sing 474 n n C34 H342 VX6 sing 475 n n C35 H351 VX6 sing 476 n n C35 H352 VX6 sing 477 n n # _atom_sites.entry_id 4ZOG _atom_sites.fract_transf_matrix[1][1] 0.00944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017683 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VX6 A 1 601 1 VX6 VX6 . D 3 MXE A 1 602 1 MXE MOE . E 3 MXE A 1 603 2 MXE MOE . F 3 MXE A 1 604 3 MXE MOE . G 2 VX6 B 1 601 1 VX6 VX6 . H 4 MES B 1 602 1 MES MES . I 5 HOH A 1 701 71 HOH HOH . I 5 HOH A 2 702 66 HOH HOH . I 5 HOH A 3 703 44 HOH HOH . I 5 HOH A 4 704 24 HOH HOH . I 5 HOH A 5 705 118 HOH HOH . I 5 HOH A 6 706 32 HOH HOH . I 5 HOH A 7 707 43 HOH HOH . I 5 HOH A 8 708 12 HOH HOH . I 5 HOH A 9 709 42 HOH HOH . I 5 HOH A 10 710 77 HOH HOH . I 5 HOH A 11 711 80 HOH HOH . I 5 HOH A 12 712 54 HOH HOH . I 5 HOH A 13 713 20 HOH HOH . I 5 HOH A 14 714 62 HOH HOH . I 5 HOH A 15 715 115 HOH HOH . I 5 HOH A 16 716 48 HOH HOH . I 5 HOH A 17 717 112 HOH HOH . I 5 HOH A 18 718 81 HOH HOH . I 5 HOH A 19 719 49 HOH HOH . I 5 HOH A 20 720 89 HOH HOH . I 5 HOH A 21 721 10 HOH HOH . I 5 HOH A 22 722 79 HOH HOH . I 5 HOH A 23 723 68 HOH HOH . I 5 HOH A 24 724 85 HOH HOH . I 5 HOH A 25 725 9 HOH HOH . I 5 HOH A 26 726 4 HOH HOH . I 5 HOH A 27 727 90 HOH HOH . I 5 HOH A 28 728 13 HOH HOH . I 5 HOH A 29 729 105 HOH HOH . I 5 HOH A 30 730 41 HOH HOH . I 5 HOH A 31 731 65 HOH HOH . I 5 HOH A 32 732 69 HOH HOH . I 5 HOH A 33 733 63 HOH HOH . I 5 HOH A 34 734 47 HOH HOH . I 5 HOH A 35 735 64 HOH HOH . I 5 HOH A 36 736 29 HOH HOH . I 5 HOH A 37 737 107 HOH HOH . I 5 HOH A 38 738 18 HOH HOH . I 5 HOH A 39 739 94 HOH HOH . I 5 HOH A 40 740 31 HOH HOH . I 5 HOH A 41 741 73 HOH HOH . I 5 HOH A 42 742 100 HOH HOH . I 5 HOH A 43 743 53 HOH HOH . I 5 HOH A 44 744 98 HOH HOH . I 5 HOH A 45 745 84 HOH HOH . I 5 HOH A 46 746 38 HOH HOH . I 5 HOH A 47 747 15 HOH HOH . I 5 HOH A 48 748 2 HOH HOH . I 5 HOH A 49 749 21 HOH HOH . I 5 HOH A 50 750 22 HOH HOH . I 5 HOH A 51 751 33 HOH HOH . I 5 HOH A 52 752 87 HOH HOH . I 5 HOH A 53 753 72 HOH HOH . I 5 HOH A 54 754 97 HOH HOH . I 5 HOH A 55 755 109 HOH HOH . I 5 HOH A 56 756 74 HOH HOH . I 5 HOH A 57 757 101 HOH HOH . I 5 HOH A 58 758 108 HOH HOH . I 5 HOH A 59 759 92 HOH HOH . I 5 HOH A 60 760 37 HOH HOH . I 5 HOH A 61 761 7 HOH HOH . I 5 HOH A 62 762 6 HOH HOH . I 5 HOH A 63 763 51 HOH HOH . I 5 HOH A 64 764 96 HOH HOH . I 5 HOH A 65 765 16 HOH HOH . I 5 HOH A 66 766 19 HOH HOH . I 5 HOH A 67 767 3 HOH HOH . I 5 HOH A 68 768 35 HOH HOH . I 5 HOH A 69 769 57 HOH HOH . I 5 HOH A 70 770 88 HOH HOH . I 5 HOH A 71 771 75 HOH HOH . I 5 HOH A 72 772 5 HOH HOH . I 5 HOH A 73 773 126 HOH HOH . I 5 HOH A 74 774 110 HOH HOH . I 5 HOH A 75 775 56 HOH HOH . I 5 HOH A 76 776 114 HOH HOH . I 5 HOH A 77 777 28 HOH HOH . I 5 HOH A 78 778 111 HOH HOH . I 5 HOH A 79 779 17 HOH HOH . I 5 HOH A 80 780 99 HOH HOH . I 5 HOH A 81 781 61 HOH HOH . I 5 HOH A 82 782 59 HOH HOH . I 5 HOH A 83 783 123 HOH HOH . I 5 HOH A 84 784 122 HOH HOH . J 5 HOH B 1 701 45 HOH HOH . J 5 HOH B 2 702 8 HOH HOH . J 5 HOH B 3 703 30 HOH HOH . J 5 HOH B 4 704 50 HOH HOH . J 5 HOH B 5 705 52 HOH HOH . J 5 HOH B 6 706 104 HOH HOH . J 5 HOH B 7 707 34 HOH HOH . J 5 HOH B 8 708 25 HOH HOH . J 5 HOH B 9 709 78 HOH HOH . J 5 HOH B 10 710 26 HOH HOH . J 5 HOH B 11 711 67 HOH HOH . J 5 HOH B 12 712 39 HOH HOH . J 5 HOH B 13 713 23 HOH HOH . J 5 HOH B 14 714 120 HOH HOH . J 5 HOH B 15 715 40 HOH HOH . J 5 HOH B 16 716 93 HOH HOH . J 5 HOH B 17 717 119 HOH HOH . J 5 HOH B 18 718 121 HOH HOH . J 5 HOH B 19 719 70 HOH HOH . J 5 HOH B 20 720 36 HOH HOH . J 5 HOH B 21 721 11 HOH HOH . J 5 HOH B 22 722 86 HOH HOH . J 5 HOH B 23 723 95 HOH HOH . J 5 HOH B 24 724 60 HOH HOH . J 5 HOH B 25 725 106 HOH HOH . J 5 HOH B 26 726 113 HOH HOH . J 5 HOH B 27 727 46 HOH HOH . J 5 HOH B 28 728 116 HOH HOH . J 5 HOH B 29 729 58 HOH HOH . J 5 HOH B 30 730 76 HOH HOH . J 5 HOH B 31 731 27 HOH HOH . J 5 HOH B 32 732 55 HOH HOH . J 5 HOH B 33 733 14 HOH HOH . J 5 HOH B 34 734 83 HOH HOH . J 5 HOH B 35 735 103 HOH HOH . J 5 HOH B 36 736 82 HOH HOH . J 5 HOH B 37 737 91 HOH HOH . J 5 HOH B 38 738 102 HOH HOH . J 5 HOH B 39 739 125 HOH HOH . J 5 HOH B 40 740 124 HOH HOH . J 5 HOH B 41 741 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VX6 . . . C 2 -6.738 10.373 -1.811 1 40.91 ? N1 VX6 601 A 1 HETATM 2 C C2 VX6 . . . C 2 -7.769 9.9 -0.871 1 23.95 ? C2 VX6 601 A 1 HETATM 3 C C3 VX6 . . . C 2 -9.146 10.339 -1.36 1 30.09 ? C3 VX6 601 A 1 HETATM 4 N N4 VX6 . . . C 2 -9.174 11.802 -1.556 1 30.56 ? N4 VX6 601 A 1 HETATM 5 C C5 VX6 . . . C 2 -8.06 12.31 -2.384 1 36.47 ? C5 VX6 601 A 1 HETATM 6 C C6 VX6 . . . C 2 -6.733 11.841 -1.809 1 40.32 ? C6 VX6 601 A 1 HETATM 7 C C7 VX6 . . . C 2 -5.409 9.851 -1.442 1 28.4 ? C7 VX6 601 A 1 HETATM 8 C C8 VX6 . . . C 2 -10.412 12.298 -2.044 1 23.34 ? C8 VX6 601 A 1 HETATM 9 C C9 VX6 . . . C 2 -11.634 11.726 -1.68 1 19.02 ? C9 VX6 601 A 1 HETATM 10 C C10 VX6 . . . C 2 -12.81 12.307 -2.156 1 20.3 ? C10 VX6 601 A 1 HETATM 11 N N11 VX6 . . . C 2 -12.76 13.396 -2.953 1 21.96 ? N11 VX6 601 A 1 HETATM 12 C C12 VX6 . . . C 2 -11.57 13.939 -3.304 1 24.79 ? C12 VX6 601 A 1 HETATM 13 N N13 VX6 . . . C 2 -10.415 13.396 -2.841 1 24.74 ? N13 VX6 601 A 1 HETATM 14 N N14 VX6 . . . C 2 -13.995 11.765 -1.824 1 18 ? N14 VX6 601 A 1 HETATM 15 C C15 VX6 . . . C 2 -15.202 12.312 -2.104 1 19.91 ? C15 VX6 601 A 1 HETATM 16 C C17 VX6 . . . C 2 -15.69 13.401 -2.832 1 20.36 ? C17 VX6 601 A 1 HETATM 17 C C18 VX6 . . . C 2 -17.066 13.309 -2.654 1 21.04 ? C18 VX6 601 A 1 HETATM 18 N N19 VX6 . . . C 2 -17.391 12.251 -1.889 1 23.36 ? N19 VX6 601 A 1 HETATM 19 N N20 VX6 . . . C 2 -16.192 11.619 -1.537 1 23.11 ? N20 VX6 601 A 1 HETATM 20 C C21 VX6 . . . C 2 -17.928 14.36 -3.313 1 24.13 ? C21 VX6 601 A 1 HETATM 21 S S23 VX6 . . . C 2 -11.492 15.334 -4.284 1 28.32 ? S23 VX6 601 A 1 HETATM 22 C C24 VX6 . . . C 2 -13.097 15.904 -4.482 1 33.57 ? C24 VX6 601 A 1 HETATM 23 C C25 VX6 . . . C 2 -13.661 15.939 -5.765 1 24.7 ? C25 VX6 601 A 1 HETATM 24 C C26 VX6 . . . C 2 -14.963 16.413 -5.961 1 20.77 ? C26 VX6 601 A 1 HETATM 25 C C27 VX6 . . . C 2 -15.734 16.85 -4.885 1 25.2 ? C27 VX6 601 A 1 HETATM 26 C C28 VX6 . . . C 2 -15.172 16.806 -3.597 1 21.42 ? C28 VX6 601 A 1 HETATM 27 C C29 VX6 . . . C 2 -13.866 16.347 -3.401 1 27.04 ? C29 VX6 601 A 1 HETATM 28 N N30 VX6 . . . C 2 -16.999 17.285 -5.154 1 27.43 ? N30 VX6 601 A 1 HETATM 29 C C31 VX6 . . . C 2 -17.963 17.643 -4.282 1 30.19 ? C31 VX6 601 A 1 HETATM 30 O O32 VX6 . . . C 2 -17.85 17.649 -3.063 1 28.06 ? O32 VX6 601 A 1 HETATM 31 C C33 VX6 . . . C 2 -19.283 18.037 -4.905 1 24.82 ? C33 VX6 601 A 1 HETATM 32 C C34 VX6 . . . C 2 -20.468 17.318 -4.247 1 21.75 ? C34 VX6 601 A 1 HETATM 33 C C35 VX6 . . . C 2 -20.178 18.771 -3.907 1 27.31 ? C35 VX6 601 A 1 # _model_server_stats.io_time_ms 119 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 33 #