data_4ZPW # _model_server_result.job_id p-ijsHgGB39AsPjF_gsh_A _model_server_result.datetime_utc '2024-11-15 03:20:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zpw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 4ZPW # _exptl.entry_id 4ZPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZPW _cell.length_a 46.667 _cell.length_b 109.887 _cell.length_c 125.279 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 R CYS 383 1_555 A SG CYS 27 R CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 45 R CYS 425 1_555 A SG CYS 98 R CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 57 R CYS 437 1_555 A SG CYS 205 R CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 123 R CYS 503 1_555 A SG CYS 146 R CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 3 S CYS 383 1_555 B SG CYS 27 S CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 45 S CYS 425 1_555 B SG CYS 98 S CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 57 S CYS 437 1_555 B SG CYS 205 S CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 123 S CYS 503 1_555 B SG CYS 146 S CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 30 R ASN 410 1_555 D C1 NAG . R NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale2 A ND2 ASN 107 R ASN 487 1_555 C C1 NAG . R NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 B ND2 ASN 30 S ASN 410 1_555 G C1 NAG . S NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale4 B ND2 ASN 107 S ASN 487 1_555 F C1 NAG . S NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 290 n n P O2 PO4 sing 291 n n P O3 PO4 sing 292 n n P O4 PO4 sing 293 n n # _atom_sites.entry_id 4ZPW _atom_sites.fract_transf_matrix[1][1] 0.021428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007982 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG R 1 601 1 NAG NAG . D 2 NAG R 1 602 1 NAG NAG . E 3 PO4 S 1 601 1 PO4 PO4 . F 2 NAG S 1 602 1 NAG NAG . G 2 NAG S 1 603 1 NAG NAG . H 4 HOH R 1 701 81 HOH HOH . H 4 HOH R 2 702 57 HOH HOH . H 4 HOH R 3 703 2 HOH HOH . H 4 HOH R 4 704 42 HOH HOH . H 4 HOH R 5 705 48 HOH HOH . H 4 HOH R 6 706 22 HOH HOH . H 4 HOH R 7 707 44 HOH HOH . H 4 HOH R 8 708 113 HOH HOH . H 4 HOH R 9 709 93 HOH HOH . H 4 HOH R 10 710 87 HOH HOH . H 4 HOH R 11 711 39 HOH HOH . H 4 HOH R 12 712 82 HOH HOH . H 4 HOH R 13 713 18 HOH HOH . H 4 HOH R 14 714 73 HOH HOH . H 4 HOH R 15 715 24 HOH HOH . H 4 HOH R 16 716 27 HOH HOH . H 4 HOH R 17 717 10 HOH HOH . H 4 HOH R 18 718 62 HOH HOH . H 4 HOH R 19 719 7 HOH HOH . H 4 HOH R 20 720 109 HOH HOH . H 4 HOH R 21 721 86 HOH HOH . H 4 HOH R 22 722 63 HOH HOH . H 4 HOH R 23 723 19 HOH HOH . H 4 HOH R 24 724 37 HOH HOH . H 4 HOH R 25 725 52 HOH HOH . H 4 HOH R 26 726 20 HOH HOH . H 4 HOH R 27 727 59 HOH HOH . H 4 HOH R 28 728 68 HOH HOH . H 4 HOH R 29 729 14 HOH HOH . H 4 HOH R 30 730 35 HOH HOH . H 4 HOH R 31 731 78 HOH HOH . H 4 HOH R 32 732 41 HOH HOH . H 4 HOH R 33 733 70 HOH HOH . H 4 HOH R 34 734 72 HOH HOH . H 4 HOH R 35 735 71 HOH HOH . H 4 HOH R 36 736 28 HOH HOH . H 4 HOH R 37 737 84 HOH HOH . H 4 HOH R 38 738 110 HOH HOH . H 4 HOH R 39 739 21 HOH HOH . H 4 HOH R 40 740 97 HOH HOH . H 4 HOH R 41 741 64 HOH HOH . H 4 HOH R 42 742 45 HOH HOH . H 4 HOH R 43 743 108 HOH HOH . H 4 HOH R 44 744 15 HOH HOH . H 4 HOH R 45 745 38 HOH HOH . H 4 HOH R 46 746 1 HOH HOH . H 4 HOH R 47 747 34 HOH HOH . H 4 HOH R 48 748 101 HOH HOH . H 4 HOH R 49 749 56 HOH HOH . H 4 HOH R 50 750 98 HOH HOH . H 4 HOH R 51 751 103 HOH HOH . H 4 HOH R 52 752 46 HOH HOH . H 4 HOH R 53 753 12 HOH HOH . H 4 HOH R 54 754 8 HOH HOH . H 4 HOH R 55 755 77 HOH HOH . H 4 HOH R 56 756 3 HOH HOH . H 4 HOH R 57 757 13 HOH HOH . H 4 HOH R 58 758 29 HOH HOH . H 4 HOH R 59 759 55 HOH HOH . H 4 HOH R 60 760 89 HOH HOH . H 4 HOH R 61 761 47 HOH HOH . H 4 HOH R 62 762 80 HOH HOH . H 4 HOH R 63 763 60 HOH HOH . H 4 HOH R 64 764 53 HOH HOH . H 4 HOH R 65 765 74 HOH HOH . I 4 HOH S 1 701 61 HOH HOH . I 4 HOH S 2 702 91 HOH HOH . I 4 HOH S 3 703 76 HOH HOH . I 4 HOH S 4 704 54 HOH HOH . I 4 HOH S 5 705 112 HOH HOH . I 4 HOH S 6 706 36 HOH HOH . I 4 HOH S 7 707 102 HOH HOH . I 4 HOH S 8 708 31 HOH HOH . I 4 HOH S 9 709 32 HOH HOH . I 4 HOH S 10 710 69 HOH HOH . I 4 HOH S 11 711 67 HOH HOH . I 4 HOH S 12 712 66 HOH HOH . I 4 HOH S 13 713 58 HOH HOH . I 4 HOH S 14 714 30 HOH HOH . I 4 HOH S 15 715 33 HOH HOH . I 4 HOH S 16 716 83 HOH HOH . I 4 HOH S 17 717 96 HOH HOH . I 4 HOH S 18 718 65 HOH HOH . I 4 HOH S 19 719 90 HOH HOH . I 4 HOH S 20 720 85 HOH HOH . I 4 HOH S 21 721 111 HOH HOH . I 4 HOH S 22 722 75 HOH HOH . I 4 HOH S 23 723 107 HOH HOH . I 4 HOH S 24 724 6 HOH HOH . I 4 HOH S 25 725 25 HOH HOH . I 4 HOH S 26 726 50 HOH HOH . I 4 HOH S 27 727 4 HOH HOH . I 4 HOH S 28 728 49 HOH HOH . I 4 HOH S 29 729 26 HOH HOH . I 4 HOH S 30 730 88 HOH HOH . I 4 HOH S 31 731 51 HOH HOH . I 4 HOH S 32 732 16 HOH HOH . I 4 HOH S 33 733 94 HOH HOH . I 4 HOH S 34 734 95 HOH HOH . I 4 HOH S 35 735 106 HOH HOH . I 4 HOH S 36 736 105 HOH HOH . I 4 HOH S 37 737 79 HOH HOH . I 4 HOH S 38 738 100 HOH HOH . I 4 HOH S 39 739 92 HOH HOH . I 4 HOH S 40 740 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 3 15.899 -49.796 -11.473 1 159.05 ? P PO4 601 S 1 HETATM 2 O O1 PO4 . . . E 3 16.324 -49.727 -12.921 1 159.3 ? O1 PO4 601 S 1 HETATM 3 O O2 PO4 . . . E 3 15.551 -48.411 -10.985 1 158.96 ? O2 PO4 601 S 1 HETATM 4 O O3 PO4 . . . E 3 17.03 -50.354 -10.642 1 157.52 ? O3 PO4 601 S 1 HETATM 5 O O4 PO4 . . . E 3 14.691 -50.694 -11.346 1 158.66 ? O4 PO4 601 S 1 # _model_server_stats.io_time_ms 88 _model_server_stats.parse_time_ms 121 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 421 _model_server_stats.encode_time_ms 58 _model_server_stats.element_count 5 #