data_4ZPW
#
_model_server_result.job_id            FJIu1Q_MJxHqptizGLL5qQ 
_model_server_result.datetime_utc      '2024-11-15 03:11:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zpw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    4ZPW 
#
_exptl.entry_id    4ZPW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZPW 
_cell.length_a            46.667 
_cell.length_b            109.887 
_cell.length_c            125.279 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZPW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,H 1 1 
B,E,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 3 R CYS 383 1_555 A SG CYS 27 R CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 45 R CYS 425 1_555 A SG CYS 98 R CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 57 R CYS 437 1_555 A SG CYS 205 R CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 123 R CYS 503 1_555 A SG CYS 146 R CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 B SG CYS 3 S CYS 383 1_555 B SG CYS 27 S CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 B SG CYS 45 S CYS 425 1_555 B SG CYS 98 S CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 B SG CYS 57 S CYS 437 1_555 B SG CYS 205 S CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf8 B SG CYS 123 S CYS 503 1_555 B SG CYS 146 S CYS 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 A ND2 ASN 30 R ASN 410 1_555 D C1 NAG . R NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale2 A ND2 ASN 107 R ASN 487 1_555 C C1 NAG . R NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale3 B ND2 ASN 30 S ASN 410 1_555 G C1 NAG . S NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale4 B ND2 ASN 107 S ASN 487 1_555 F C1 NAG . S NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4ZPW 
_atom_sites.fract_transf_matrix[1][1]    0.021428 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0091 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007982 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG R 1 601 1 NAG NAG . 
D 2 NAG R 1 602 1 NAG NAG . 
E 3 PO4 S 1 601 1 PO4 PO4 . 
F 2 NAG S 1 602 1 NAG NAG . 
G 2 NAG S 1 603 1 NAG NAG . 
H 4 HOH R 1 701 81 HOH HOH . 
H 4 HOH R 2 702 57 HOH HOH . 
H 4 HOH R 3 703 2 HOH HOH . 
H 4 HOH R 4 704 42 HOH HOH . 
H 4 HOH R 5 705 48 HOH HOH . 
H 4 HOH R 6 706 22 HOH HOH . 
H 4 HOH R 7 707 44 HOH HOH . 
H 4 HOH R 8 708 113 HOH HOH . 
H 4 HOH R 9 709 93 HOH HOH . 
H 4 HOH R 10 710 87 HOH HOH . 
H 4 HOH R 11 711 39 HOH HOH . 
H 4 HOH R 12 712 82 HOH HOH . 
H 4 HOH R 13 713 18 HOH HOH . 
H 4 HOH R 14 714 73 HOH HOH . 
H 4 HOH R 15 715 24 HOH HOH . 
H 4 HOH R 16 716 27 HOH HOH . 
H 4 HOH R 17 717 10 HOH HOH . 
H 4 HOH R 18 718 62 HOH HOH . 
H 4 HOH R 19 719 7 HOH HOH . 
H 4 HOH R 20 720 109 HOH HOH . 
H 4 HOH R 21 721 86 HOH HOH . 
H 4 HOH R 22 722 63 HOH HOH . 
H 4 HOH R 23 723 19 HOH HOH . 
H 4 HOH R 24 724 37 HOH HOH . 
H 4 HOH R 25 725 52 HOH HOH . 
H 4 HOH R 26 726 20 HOH HOH . 
H 4 HOH R 27 727 59 HOH HOH . 
H 4 HOH R 28 728 68 HOH HOH . 
H 4 HOH R 29 729 14 HOH HOH . 
H 4 HOH R 30 730 35 HOH HOH . 
H 4 HOH R 31 731 78 HOH HOH . 
H 4 HOH R 32 732 41 HOH HOH . 
H 4 HOH R 33 733 70 HOH HOH . 
H 4 HOH R 34 734 72 HOH HOH . 
H 4 HOH R 35 735 71 HOH HOH . 
H 4 HOH R 36 736 28 HOH HOH . 
H 4 HOH R 37 737 84 HOH HOH . 
H 4 HOH R 38 738 110 HOH HOH . 
H 4 HOH R 39 739 21 HOH HOH . 
H 4 HOH R 40 740 97 HOH HOH . 
H 4 HOH R 41 741 64 HOH HOH . 
H 4 HOH R 42 742 45 HOH HOH . 
H 4 HOH R 43 743 108 HOH HOH . 
H 4 HOH R 44 744 15 HOH HOH . 
H 4 HOH R 45 745 38 HOH HOH . 
H 4 HOH R 46 746 1 HOH HOH . 
H 4 HOH R 47 747 34 HOH HOH . 
H 4 HOH R 48 748 101 HOH HOH . 
H 4 HOH R 49 749 56 HOH HOH . 
H 4 HOH R 50 750 98 HOH HOH . 
H 4 HOH R 51 751 103 HOH HOH . 
H 4 HOH R 52 752 46 HOH HOH . 
H 4 HOH R 53 753 12 HOH HOH . 
H 4 HOH R 54 754 8 HOH HOH . 
H 4 HOH R 55 755 77 HOH HOH . 
H 4 HOH R 56 756 3 HOH HOH . 
H 4 HOH R 57 757 13 HOH HOH . 
H 4 HOH R 58 758 29 HOH HOH . 
H 4 HOH R 59 759 55 HOH HOH . 
H 4 HOH R 60 760 89 HOH HOH . 
H 4 HOH R 61 761 47 HOH HOH . 
H 4 HOH R 62 762 80 HOH HOH . 
H 4 HOH R 63 763 60 HOH HOH . 
H 4 HOH R 64 764 53 HOH HOH . 
H 4 HOH R 65 765 74 HOH HOH . 
I 4 HOH S 1 701 61 HOH HOH . 
I 4 HOH S 2 702 91 HOH HOH . 
I 4 HOH S 3 703 76 HOH HOH . 
I 4 HOH S 4 704 54 HOH HOH . 
I 4 HOH S 5 705 112 HOH HOH . 
I 4 HOH S 6 706 36 HOH HOH . 
I 4 HOH S 7 707 102 HOH HOH . 
I 4 HOH S 8 708 31 HOH HOH . 
I 4 HOH S 9 709 32 HOH HOH . 
I 4 HOH S 10 710 69 HOH HOH . 
I 4 HOH S 11 711 67 HOH HOH . 
I 4 HOH S 12 712 66 HOH HOH . 
I 4 HOH S 13 713 58 HOH HOH . 
I 4 HOH S 14 714 30 HOH HOH . 
I 4 HOH S 15 715 33 HOH HOH . 
I 4 HOH S 16 716 83 HOH HOH . 
I 4 HOH S 17 717 96 HOH HOH . 
I 4 HOH S 18 718 65 HOH HOH . 
I 4 HOH S 19 719 90 HOH HOH . 
I 4 HOH S 20 720 85 HOH HOH . 
I 4 HOH S 21 721 111 HOH HOH . 
I 4 HOH S 22 722 75 HOH HOH . 
I 4 HOH S 23 723 107 HOH HOH . 
I 4 HOH S 24 724 6 HOH HOH . 
I 4 HOH S 25 725 25 HOH HOH . 
I 4 HOH S 26 726 50 HOH HOH . 
I 4 HOH S 27 727 4 HOH HOH . 
I 4 HOH S 28 728 49 HOH HOH . 
I 4 HOH S 29 729 26 HOH HOH . 
I 4 HOH S 30 730 88 HOH HOH . 
I 4 HOH S 31 731 51 HOH HOH . 
I 4 HOH S 32 732 16 HOH HOH . 
I 4 HOH S 33 733 94 HOH HOH . 
I 4 HOH S 34 734 95 HOH HOH . 
I 4 HOH S 35 735 106 HOH HOH . 
I 4 HOH S 36 736 105 HOH HOH . 
I 4 HOH S 37 737 79 HOH HOH . 
I 4 HOH S 38 738 100 HOH HOH . 
I 4 HOH S 39 739 92 HOH HOH . 
I 4 HOH S 40 740 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . F 2 22.852 -75.476 -17.609 1 115.82 ? C1 NAG 602 S 1 
HETATM 2 C C2 NAG . . . F 2 22.218 -75.616 -16.219 1 114.25 ? C2 NAG 602 S 1 
HETATM 3 C C3 NAG . . . F 2 23.284 -75.959 -15.177 1 120.69 ? C3 NAG 602 S 1 
HETATM 4 C C4 NAG . . . F 2 24.097 -77.171 -15.617 1 124.85 ? C4 NAG 602 S 1 
HETATM 5 C C5 NAG . . . F 2 24.655 -76.948 -17.019 1 127.87 ? C5 NAG 602 S 1 
HETATM 6 C C6 NAG . . . F 2 25.39 -78.152 -17.562 1 127.82 ? C6 NAG 602 S 1 
HETATM 7 C C7 NAG . . . F 2 22.049 -73.211 -15.665 1 101.85 ? C7 NAG 602 S 1 
HETATM 8 C C8 NAG . . . F 2 21.116 -72.108 -15.267 1 99.62 ? C8 NAG 602 S 1 
HETATM 9 N N2 NAG . . . F 2 21.488 -74.416 -15.837 1 108 ? N2 NAG 602 S 1 
HETATM 10 O O3 NAG . . . F 2 22.66 -76.22 -13.925 1 120.91 ? O3 NAG 602 S 1 
HETATM 11 O O4 NAG . . . F 2 25.174 -77.388 -14.713 1 128.26 ? O4 NAG 602 S 1 
HETATM 12 O O5 NAG . . . F 2 23.581 -76.673 -17.929 1 127.98 ? O5 NAG 602 S 1 
HETATM 13 O O6 NAG . . . F 2 26.542 -78.453 -16.786 1 126.11 ? O6 NAG 602 S 1 
HETATM 14 O O7 NAG . . . F 2 23.251 -73.016 -15.824 1 100.72 ? O7 NAG 602 S 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#