data_4ZQI
#
_model_server_result.job_id            bp5zE9V6Qs9JZdiq7Zl84A 
_model_server_result.datetime_utc      '2025-04-07 20:49:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    4ZQI 
#
_exptl.entry_id    4ZQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZQI 
_cell.length_a            62.993 
_cell.length_b            107.027 
_cell.length_c            211.003 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,J,K 1 1 
C,D,H,I,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 68 A GLU 68 1_555 E NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc2 A O SER 91 A SER 91 1_555 E NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc3 A OG1 THR 94 A THR 94 1_555 E NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc4 A OG1 THR 273 A THR 273 1_555 E NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc5 B O GLU 68 B GLU 68 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc6 B O SER 91 B SER 91 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc7 B OG1 THR 94 B THR 94 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc8 B OG1 THR 273 B THR 273 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc9 C O GLU 68 C GLU 68 1_555 H NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc10 C O SER 91 C SER 91 1_555 H NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc11 C OG1 THR 94 C THR 94 1_555 H NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc12 C OG1 THR 273 C THR 273 1_555 H NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc13 D O GLU 68 D GLU 68 1_555 I NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc14 D O SER 91 D SER 91 1_555 I NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc15 D OG1 THR 94 D THR 94 1_555 I NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc16 D OG1 THR 273 D THR 273 1_555 I NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc17 I NA NA . D NA 401 1_555 M O HOH . D HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4ZQI 
_atom_sites.fract_transf_matrix[1][1]    0.015875 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009343 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004739 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NA A 1 401 401 NA NA . 
F 2 NA B 1 401 401 NA NA . 
G 2 NA B 1 402 1 NA NA . 
H 2 NA C 1 401 402 NA NA . 
I 2 NA D 1 401 401 NA NA . 
J 3 HOH A 1 501 501 HOH HOH . 
J 3 HOH A 2 502 502 HOH HOH . 
J 3 HOH A 3 503 503 HOH HOH . 
J 3 HOH A 4 504 510 HOH HOH . 
J 3 HOH A 5 505 508 HOH HOH . 
J 3 HOH A 6 506 507 HOH HOH . 
J 3 HOH A 7 507 506 HOH HOH . 
J 3 HOH A 8 508 504 HOH HOH . 
J 3 HOH A 9 509 505 HOH HOH . 
J 3 HOH A 10 510 509 HOH HOH . 
J 3 HOH A 11 511 511 HOH HOH . 
J 3 HOH A 12 512 512 HOH HOH . 
J 3 HOH A 13 513 513 HOH HOH . 
J 3 HOH A 14 514 514 HOH HOH . 
J 3 HOH A 15 515 515 HOH HOH . 
J 3 HOH A 16 516 531 HOH HOH . 
J 3 HOH A 17 517 518 HOH HOH . 
J 3 HOH A 18 518 516 HOH HOH . 
J 3 HOH A 19 519 519 HOH HOH . 
J 3 HOH A 20 520 520 HOH HOH . 
J 3 HOH A 21 521 517 HOH HOH . 
J 3 HOH A 22 522 525 HOH HOH . 
J 3 HOH A 23 523 521 HOH HOH . 
J 3 HOH A 24 524 522 HOH HOH . 
J 3 HOH A 25 525 523 HOH HOH . 
J 3 HOH A 26 526 529 HOH HOH . 
J 3 HOH A 27 527 527 HOH HOH . 
J 3 HOH A 28 528 524 HOH HOH . 
J 3 HOH A 29 529 528 HOH HOH . 
J 3 HOH A 30 530 526 HOH HOH . 
J 3 HOH A 31 531 530 HOH HOH . 
J 3 HOH A 32 532 532 HOH HOH . 
J 3 HOH A 33 533 536 HOH HOH . 
J 3 HOH A 34 534 533 HOH HOH . 
J 3 HOH A 35 535 534 HOH HOH . 
J 3 HOH A 36 536 535 HOH HOH . 
J 3 HOH A 37 537 537 HOH HOH . 
K 3 HOH B 1 501 501 HOH HOH . 
K 3 HOH B 2 502 502 HOH HOH . 
K 3 HOH B 3 503 503 HOH HOH . 
K 3 HOH B 4 504 505 HOH HOH . 
K 3 HOH B 5 505 507 HOH HOH . 
K 3 HOH B 6 506 504 HOH HOH . 
K 3 HOH B 7 507 506 HOH HOH . 
K 3 HOH B 8 508 509 HOH HOH . 
K 3 HOH B 9 509 508 HOH HOH . 
K 3 HOH B 10 510 510 HOH HOH . 
K 3 HOH B 11 511 511 HOH HOH . 
K 3 HOH B 12 512 513 HOH HOH . 
K 3 HOH B 13 513 512 HOH HOH . 
K 3 HOH B 14 514 518 HOH HOH . 
K 3 HOH B 15 515 514 HOH HOH . 
K 3 HOH B 16 516 517 HOH HOH . 
K 3 HOH B 17 517 516 HOH HOH . 
K 3 HOH B 18 518 519 HOH HOH . 
K 3 HOH B 19 519 515 HOH HOH . 
K 3 HOH B 20 520 522 HOH HOH . 
K 3 HOH B 21 521 521 HOH HOH . 
K 3 HOH B 22 522 520 HOH HOH . 
K 3 HOH B 23 523 523 HOH HOH . 
K 3 HOH B 24 524 525 HOH HOH . 
K 3 HOH B 25 525 526 HOH HOH . 
K 3 HOH B 26 526 524 HOH HOH . 
K 3 HOH B 27 527 527 HOH HOH . 
K 3 HOH B 28 528 528 HOH HOH . 
K 3 HOH B 29 529 529 HOH HOH . 
K 3 HOH B 30 530 531 HOH HOH . 
K 3 HOH B 31 531 530 HOH HOH . 
K 3 HOH B 32 532 532 HOH HOH . 
K 3 HOH B 33 533 534 HOH HOH . 
K 3 HOH B 34 534 533 HOH HOH . 
K 3 HOH B 35 535 535 HOH HOH . 
L 3 HOH C 1 501 503 HOH HOH . 
L 3 HOH C 2 502 501 HOH HOH . 
L 3 HOH C 3 503 502 HOH HOH . 
L 3 HOH C 4 504 515 HOH HOH . 
L 3 HOH C 5 505 504 HOH HOH . 
L 3 HOH C 6 506 505 HOH HOH . 
L 3 HOH C 7 507 507 HOH HOH . 
L 3 HOH C 8 508 508 HOH HOH . 
L 3 HOH C 9 509 506 HOH HOH . 
L 3 HOH C 10 510 512 HOH HOH . 
L 3 HOH C 11 511 511 HOH HOH . 
L 3 HOH C 12 512 510 HOH HOH . 
L 3 HOH C 13 513 514 HOH HOH . 
L 3 HOH C 14 514 513 HOH HOH . 
L 3 HOH C 15 515 509 HOH HOH . 
L 3 HOH C 16 516 518 HOH HOH . 
L 3 HOH C 17 517 517 HOH HOH . 
L 3 HOH C 18 518 516 HOH HOH . 
L 3 HOH C 19 519 521 HOH HOH . 
L 3 HOH C 20 520 520 HOH HOH . 
L 3 HOH C 21 521 519 HOH HOH . 
L 3 HOH C 22 522 525 HOH HOH . 
L 3 HOH C 23 523 524 HOH HOH . 
L 3 HOH C 24 524 523 HOH HOH . 
L 3 HOH C 25 525 522 HOH HOH . 
L 3 HOH C 26 526 527 HOH HOH . 
L 3 HOH C 27 527 532 HOH HOH . 
L 3 HOH C 28 528 526 HOH HOH . 
L 3 HOH C 29 529 535 HOH HOH . 
L 3 HOH C 30 530 528 HOH HOH . 
L 3 HOH C 31 531 529 HOH HOH . 
L 3 HOH C 32 532 531 HOH HOH . 
L 3 HOH C 33 533 530 HOH HOH . 
L 3 HOH C 34 534 542 HOH HOH . 
L 3 HOH C 35 535 536 HOH HOH . 
L 3 HOH C 36 536 538 HOH HOH . 
L 3 HOH C 37 537 540 HOH HOH . 
L 3 HOH C 38 538 534 HOH HOH . 
L 3 HOH C 39 539 533 HOH HOH . 
L 3 HOH C 40 540 537 HOH HOH . 
L 3 HOH C 41 541 539 HOH HOH . 
L 3 HOH C 42 542 549 HOH HOH . 
L 3 HOH C 43 543 541 HOH HOH . 
L 3 HOH C 44 544 544 HOH HOH . 
L 3 HOH C 45 545 543 HOH HOH . 
L 3 HOH C 46 546 545 HOH HOH . 
L 3 HOH C 47 547 551 HOH HOH . 
L 3 HOH C 48 548 547 HOH HOH . 
L 3 HOH C 49 549 548 HOH HOH . 
L 3 HOH C 50 550 546 HOH HOH . 
L 3 HOH C 51 551 554 HOH HOH . 
L 3 HOH C 52 552 550 HOH HOH . 
L 3 HOH C 53 553 552 HOH HOH . 
L 3 HOH C 54 554 553 HOH HOH . 
L 3 HOH C 55 555 559 HOH HOH . 
L 3 HOH C 56 556 556 HOH HOH . 
L 3 HOH C 57 557 555 HOH HOH . 
L 3 HOH C 58 558 557 HOH HOH . 
L 3 HOH C 59 559 558 HOH HOH . 
L 3 HOH C 60 560 560 HOH HOH . 
L 3 HOH C 61 561 561 HOH HOH . 
L 3 HOH C 62 562 563 HOH HOH . 
L 3 HOH C 63 563 562 HOH HOH . 
L 3 HOH C 64 564 565 HOH HOH . 
L 3 HOH C 65 565 564 HOH HOH . 
M 3 HOH D 1 501 501 HOH HOH . 
M 3 HOH D 2 502 504 HOH HOH . 
M 3 HOH D 3 503 502 HOH HOH . 
M 3 HOH D 4 504 505 HOH HOH . 
M 3 HOH D 5 505 503 HOH HOH . 
M 3 HOH D 6 506 507 HOH HOH . 
M 3 HOH D 7 507 506 HOH HOH . 
M 3 HOH D 8 508 508 HOH HOH . 
M 3 HOH D 9 509 509 HOH HOH . 
M 3 HOH D 10 510 510 HOH HOH . 
M 3 HOH D 11 511 515 HOH HOH . 
M 3 HOH D 12 512 511 HOH HOH . 
M 3 HOH D 13 513 512 HOH HOH . 
M 3 HOH D 14 514 513 HOH HOH . 
M 3 HOH D 15 515 514 HOH HOH . 
M 3 HOH D 16 516 516 HOH HOH . 
M 3 HOH D 17 517 518 HOH HOH . 
M 3 HOH D 18 518 517 HOH HOH . 
M 3 HOH D 19 519 519 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -14.34 
_atom_site.Cartn_y               4.669 
_atom_site.Cartn_z               -27.242 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.02 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#