data_4ZQX
#
_model_server_result.job_id            Jekt3wR2OHHwhzNfRAAepw 
_model_server_result.datetime_utc      '2025-04-17 01:36:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zqx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    4ZQX 
#
_exptl.entry_id    4ZQX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZQX 
_cell.length_a            106.1 
_cell.length_b            106.1 
_cell.length_c            106.1 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZQX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_656 -z+1,x,-y+1 0 0 -1 1 0 0 0 -1 0 106.1 0 106.1 
3 'crystal symmetry operation' 11_566 y,-z+1,-x+1 0 1 0 0 0 -1 -1 0 0 0 106.1 106.1 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 142 A CYS 142 1_555 A SG CYS 155 A CYS 155 19_555 ? B ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc1 B O1G ATP . A ATP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc2 B O2B ATP . A ATP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc3 B O2A ATP . A ATP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc4 C MG MG . A MG 302 1_555 D O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc5 C MG MG . A MG 302 1_555 D O HOH . A HOH 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     4ZQX 
_atom_sites.fract_transf_matrix[1][1]    0.009425 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009425 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009425 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 301 252 ATP ATP . 
C 3 MG A 1 302 1 MG MG . 
D 4 HOH A 1 401 137 HOH HOH . 
D 4 HOH A 2 402 138 HOH HOH . 
D 4 HOH A 3 403 96 HOH HOH . 
D 4 HOH A 4 404 57 HOH HOH . 
D 4 HOH A 5 405 73 HOH HOH . 
D 4 HOH A 6 406 74 HOH HOH . 
D 4 HOH A 7 407 12 HOH HOH . 
D 4 HOH A 8 408 85 HOH HOH . 
D 4 HOH A 9 409 60 HOH HOH . 
D 4 HOH A 10 410 6 HOH HOH . 
D 4 HOH A 11 411 97 HOH HOH . 
D 4 HOH A 12 412 14 HOH HOH . 
D 4 HOH A 13 413 92 HOH HOH . 
D 4 HOH A 14 414 62 HOH HOH . 
D 4 HOH A 15 415 65 HOH HOH . 
D 4 HOH A 16 416 38 HOH HOH . 
D 4 HOH A 17 417 86 HOH HOH . 
D 4 HOH A 18 418 35 HOH HOH . 
D 4 HOH A 19 419 105 HOH HOH . 
D 4 HOH A 20 420 21 HOH HOH . 
D 4 HOH A 21 421 9 HOH HOH . 
D 4 HOH A 22 422 100 HOH HOH . 
D 4 HOH A 23 423 101 HOH HOH . 
D 4 HOH A 24 424 45 HOH HOH . 
D 4 HOH A 25 425 8 HOH HOH . 
D 4 HOH A 26 426 72 HOH HOH . 
D 4 HOH A 27 427 98 HOH HOH . 
D 4 HOH A 28 428 56 HOH HOH . 
D 4 HOH A 29 429 67 HOH HOH . 
D 4 HOH A 30 430 5 HOH HOH . 
D 4 HOH A 31 431 119 HOH HOH . 
D 4 HOH A 32 432 33 HOH HOH . 
D 4 HOH A 33 433 22 HOH HOH . 
D 4 HOH A 34 434 128 HOH HOH . 
D 4 HOH A 35 435 113 HOH HOH . 
D 4 HOH A 36 436 28 HOH HOH . 
D 4 HOH A 37 437 66 HOH HOH . 
D 4 HOH A 38 438 10 HOH HOH . 
D 4 HOH A 39 439 13 HOH HOH . 
D 4 HOH A 40 440 23 HOH HOH . 
D 4 HOH A 41 441 25 HOH HOH . 
D 4 HOH A 42 442 3 HOH HOH . 
D 4 HOH A 43 443 46 HOH HOH . 
D 4 HOH A 44 444 16 HOH HOH . 
D 4 HOH A 45 445 7 HOH HOH . 
D 4 HOH A 46 446 68 HOH HOH . 
D 4 HOH A 47 447 26 HOH HOH . 
D 4 HOH A 48 448 37 HOH HOH . 
D 4 HOH A 49 449 17 HOH HOH . 
D 4 HOH A 50 450 87 HOH HOH . 
D 4 HOH A 51 451 40 HOH HOH . 
D 4 HOH A 52 452 108 HOH HOH . 
D 4 HOH A 53 453 109 HOH HOH . 
D 4 HOH A 54 454 125 HOH HOH . 
D 4 HOH A 55 455 30 HOH HOH . 
D 4 HOH A 56 456 43 HOH HOH . 
D 4 HOH A 57 457 107 HOH HOH . 
D 4 HOH A 58 458 117 HOH HOH . 
D 4 HOH A 59 459 84 HOH HOH . 
D 4 HOH A 60 460 63 HOH HOH . 
D 4 HOH A 61 461 34 HOH HOH . 
D 4 HOH A 62 462 50 HOH HOH . 
D 4 HOH A 63 463 82 HOH HOH . 
D 4 HOH A 64 464 112 HOH HOH . 
D 4 HOH A 65 465 39 HOH HOH . 
D 4 HOH A 66 466 2 HOH HOH . 
D 4 HOH A 67 467 24 HOH HOH . 
D 4 HOH A 68 468 110 HOH HOH . 
D 4 HOH A 69 469 19 HOH HOH . 
D 4 HOH A 70 470 42 HOH HOH . 
D 4 HOH A 71 471 106 HOH HOH . 
D 4 HOH A 72 472 15 HOH HOH . 
D 4 HOH A 73 473 93 HOH HOH . 
D 4 HOH A 74 474 134 HOH HOH . 
D 4 HOH A 75 475 36 HOH HOH . 
D 4 HOH A 76 476 104 HOH HOH . 
D 4 HOH A 77 477 94 HOH HOH . 
D 4 HOH A 78 478 136 HOH HOH . 
D 4 HOH A 79 479 11 HOH HOH . 
D 4 HOH A 80 480 127 HOH HOH . 
D 4 HOH A 81 481 81 HOH HOH . 
D 4 HOH A 82 482 31 HOH HOH . 
D 4 HOH A 83 483 59 HOH HOH . 
D 4 HOH A 84 484 70 HOH HOH . 
D 4 HOH A 85 485 139 HOH HOH . 
D 4 HOH A 86 486 99 HOH HOH . 
D 4 HOH A 87 487 48 HOH HOH . 
D 4 HOH A 88 488 49 HOH HOH . 
D 4 HOH A 89 489 116 HOH HOH . 
D 4 HOH A 90 490 1 HOH HOH . 
D 4 HOH A 91 491 18 HOH HOH . 
D 4 HOH A 92 492 132 HOH HOH . 
D 4 HOH A 93 493 121 HOH HOH . 
D 4 HOH A 94 494 61 HOH HOH . 
D 4 HOH A 95 495 32 HOH HOH . 
D 4 HOH A 96 496 64 HOH HOH . 
D 4 HOH A 97 497 4 HOH HOH . 
D 4 HOH A 98 498 90 HOH HOH . 
D 4 HOH A 99 499 58 HOH HOH . 
D 4 HOH A 100 500 54 HOH HOH . 
D 4 HOH A 101 501 41 HOH HOH . 
D 4 HOH A 102 502 51 HOH HOH . 
D 4 HOH A 103 503 102 HOH HOH . 
D 4 HOH A 104 504 120 HOH HOH . 
D 4 HOH A 105 505 95 HOH HOH . 
D 4 HOH A 106 506 20 HOH HOH . 
D 4 HOH A 107 507 47 HOH HOH . 
D 4 HOH A 108 508 88 HOH HOH . 
D 4 HOH A 109 509 115 HOH HOH . 
D 4 HOH A 110 510 44 HOH HOH . 
D 4 HOH A 111 511 89 HOH HOH . 
D 4 HOH A 112 512 103 HOH HOH . 
D 4 HOH A 113 513 76 HOH HOH . 
D 4 HOH A 114 514 52 HOH HOH . 
D 4 HOH A 115 515 80 HOH HOH . 
D 4 HOH A 116 516 69 HOH HOH . 
D 4 HOH A 117 517 118 HOH HOH . 
D 4 HOH A 118 518 83 HOH HOH . 
D 4 HOH A 119 519 122 HOH HOH . 
D 4 HOH A 120 520 29 HOH HOH . 
D 4 HOH A 121 521 75 HOH HOH . 
D 4 HOH A 122 522 53 HOH HOH . 
D 4 HOH A 123 523 91 HOH HOH . 
D 4 HOH A 124 524 77 HOH HOH . 
D 4 HOH A 125 525 27 HOH HOH . 
D 4 HOH A 126 526 78 HOH HOH . 
D 4 HOH A 127 527 131 HOH HOH . 
D 4 HOH A 128 528 55 HOH HOH . 
D 4 HOH A 129 529 124 HOH HOH . 
D 4 HOH A 130 530 133 HOH HOH . 
D 4 HOH A 131 531 123 HOH HOH . 
D 4 HOH A 132 532 129 HOH HOH . 
D 4 HOH A 133 533 135 HOH HOH . 
D 4 HOH A 134 534 114 HOH HOH . 
D 4 HOH A 135 535 71 HOH HOH . 
D 4 HOH A 136 536 126 HOH HOH . 
D 4 HOH A 137 537 130 HOH HOH . 
D 4 HOH A 138 538 79 HOH HOH . 
D 4 HOH A 139 539 111 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . B 2 7.833 20.023 54.205 1 38.72 ? PG ATP 301 A 1 
HETATM 2 O O1G ATP . . . B 2 6.338 20.19 54.105 1 40.84 ? O1G ATP 301 A 1 
HETATM 3 O O2G ATP . . . B 2 8.542 20.985 55.138 1 37.25 ? O2G ATP 301 A 1 
HETATM 4 O O3G ATP . . . B 2 8.275 18.581 54.375 1 37.74 ? O3G ATP 301 A 1 
HETATM 5 P PB ATP . . . B 2 7.747 20.382 51.343 1 41.59 ? PB ATP 301 A 1 
HETATM 6 O O1B ATP . . . B 2 8.899 20.388 50.365 1 42.89 ? O1B ATP 301 A 1 
HETATM 7 O O2B ATP . . . B 2 6.763 19.24 51.346 1 40.19 ? O2B ATP 301 A 1 
HETATM 8 O O3B ATP . . . B 2 8.422 20.555 52.8 1 40.89 ? O3B ATP 301 A 1 
HETATM 9 P PA ATP . . . B 2 5.429 22.143 51.045 1 44.29 ? PA ATP 301 A 1 
HETATM 10 O O1A ATP . . . B 2 5.112 22.322 49.582 1 45.87 ? O1A ATP 301 A 1 
HETATM 11 O O2A ATP . . . B 2 4.608 21.175 51.876 1 46.23 ? O2A ATP 301 A 1 
HETATM 12 O O3A ATP . . . B 2 7.014 21.821 51.171 1 42.84 ? O3A ATP 301 A 1 
HETATM 13 O O5' ATP . . . B 2 5.317 23.609 51.734 1 43.73 ? O5' ATP 301 A 1 
HETATM 14 C C5' ATP . . . B 2 5.572 23.801 53.128 1 44.52 ? C5' ATP 301 A 1 
HETATM 15 C C4' ATP . . . B 2 5.087 25.193 53.504 1 44.37 ? C4' ATP 301 A 1 
HETATM 16 O O4' ATP . . . B 2 5.877 26.183 52.841 1 44.34 ? O4' ATP 301 A 1 
HETATM 17 C C3' ATP . . . B 2 3.648 25.44 53.073 1 45.11 ? C3' ATP 301 A 1 
HETATM 18 O O3' ATP . . . B 2 2.94 26.039 54.155 1 47.78 ? O3' ATP 301 A 1 
HETATM 19 C C2' ATP . . . B 2 3.743 26.42 51.921 1 46.58 ? C2' ATP 301 A 1 
HETATM 20 O O2' ATP . . . B 2 2.631 27.319 51.796 1 47.72 ? O2' ATP 301 A 1 
HETATM 21 C C1' ATP . . . B 2 5.031 27.163 52.236 1 45.65 ? C1' ATP 301 A 1 
HETATM 22 N N9 ATP . . . B 2 5.593 27.733 50.99 1 44.45 ? N9 ATP 301 A 1 
HETATM 23 C C8 ATP . . . B 2 5.957 27.049 49.88 1 44.53 ? C8 ATP 301 A 1 
HETATM 24 N N7 ATP . . . B 2 6.421 27.894 48.922 1 43.97 ? N7 ATP 301 A 1 
HETATM 25 C C5 ATP . . . B 2 6.348 29.135 49.432 1 43.51 ? C5 ATP 301 A 1 
HETATM 26 C C6 ATP . . . B 2 6.672 30.483 48.948 1 44.51 ? C6 ATP 301 A 1 
HETATM 27 N N6 ATP . . . B 2 7.174 30.588 47.702 1 44.95 ? N6 ATP 301 A 1 
HETATM 28 N N1 ATP . . . B 2 6.452 31.542 49.766 1 45.6 ? N1 ATP 301 A 1 
HETATM 29 C C2 ATP . . . B 2 5.948 31.368 51.007 1 46.47 ? C2 ATP 301 A 1 
HETATM 30 N N3 ATP . . . B 2 5.627 30.161 51.509 1 44.76 ? N3 ATP 301 A 1 
HETATM 31 C C4 ATP . . . B 2 5.802 29.031 50.787 1 44.03 ? C4 ATP 301 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#