data_4ZRJ # _model_server_result.job_id YifE-s0YJpUuiiYM71hNKA _model_server_result.datetime_utc '2024-12-09 13:36:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zrj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 4ZRJ # _exptl.entry_id 4ZRJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZRJ _cell.length_a 67.895 _cell.length_b 68.202 _cell.length_c 82.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZRJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4ZRJ _atom_sites.fract_transf_matrix[1][1] 0.014729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012148 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 601 1 GOL GOL . D 3 GOL A 1 602 2 GOL GOL . E 3 GOL A 1 603 3 GOL GOL . F 3 GOL A 1 604 4 GOL GOL . G 3 GOL A 1 605 5 GOL GOL . H 3 GOL A 1 606 6 GOL GOL . I 3 GOL A 1 607 7 GOL GOL . J 3 GOL A 1 608 8 GOL GOL . K 4 HOH A 1 701 24 HOH HOH . K 4 HOH A 2 702 123 HOH HOH . K 4 HOH A 3 703 103 HOH HOH . K 4 HOH A 4 704 12 HOH HOH . K 4 HOH A 5 705 71 HOH HOH . K 4 HOH A 6 706 115 HOH HOH . K 4 HOH A 7 707 11 HOH HOH . K 4 HOH A 8 708 22 HOH HOH . K 4 HOH A 9 709 2 HOH HOH . K 4 HOH A 10 710 3 HOH HOH . K 4 HOH A 11 711 135 HOH HOH . K 4 HOH A 12 712 15 HOH HOH . K 4 HOH A 13 713 36 HOH HOH . K 4 HOH A 14 714 43 HOH HOH . K 4 HOH A 15 715 10 HOH HOH . K 4 HOH A 16 716 48 HOH HOH . K 4 HOH A 17 717 21 HOH HOH . K 4 HOH A 18 718 62 HOH HOH . K 4 HOH A 19 719 4 HOH HOH . K 4 HOH A 20 720 26 HOH HOH . K 4 HOH A 21 721 34 HOH HOH . K 4 HOH A 22 722 19 HOH HOH . K 4 HOH A 23 723 20 HOH HOH . K 4 HOH A 24 724 46 HOH HOH . K 4 HOH A 25 725 58 HOH HOH . K 4 HOH A 26 726 70 HOH HOH . K 4 HOH A 27 727 29 HOH HOH . K 4 HOH A 28 728 132 HOH HOH . K 4 HOH A 29 729 30 HOH HOH . K 4 HOH A 30 730 63 HOH HOH . K 4 HOH A 31 731 68 HOH HOH . K 4 HOH A 32 732 18 HOH HOH . K 4 HOH A 33 733 5 HOH HOH . K 4 HOH A 34 734 8 HOH HOH . K 4 HOH A 35 735 136 HOH HOH . K 4 HOH A 36 736 127 HOH HOH . K 4 HOH A 37 737 32 HOH HOH . K 4 HOH A 38 738 45 HOH HOH . K 4 HOH A 39 739 37 HOH HOH . K 4 HOH A 40 740 44 HOH HOH . K 4 HOH A 41 741 52 HOH HOH . K 4 HOH A 42 742 168 HOH HOH . K 4 HOH A 43 743 165 HOH HOH . K 4 HOH A 44 744 92 HOH HOH . K 4 HOH A 45 745 90 HOH HOH . K 4 HOH A 46 746 28 HOH HOH . K 4 HOH A 47 747 137 HOH HOH . K 4 HOH A 48 748 56 HOH HOH . K 4 HOH A 49 749 84 HOH HOH . K 4 HOH A 50 750 169 HOH HOH . K 4 HOH A 51 751 100 HOH HOH . K 4 HOH A 52 752 94 HOH HOH . K 4 HOH A 53 753 80 HOH HOH . K 4 HOH A 54 754 86 HOH HOH . K 4 HOH A 55 755 143 HOH HOH . K 4 HOH A 56 756 158 HOH HOH . K 4 HOH A 57 757 151 HOH HOH . K 4 HOH A 58 758 33 HOH HOH . K 4 HOH A 59 759 35 HOH HOH . K 4 HOH A 60 760 31 HOH HOH . K 4 HOH A 61 761 89 HOH HOH . K 4 HOH A 62 762 156 HOH HOH . K 4 HOH A 63 763 79 HOH HOH . K 4 HOH A 64 764 42 HOH HOH . K 4 HOH A 65 765 129 HOH HOH . K 4 HOH A 66 766 125 HOH HOH . K 4 HOH A 67 767 142 HOH HOH . K 4 HOH A 68 768 157 HOH HOH . K 4 HOH A 69 769 150 HOH HOH . K 4 HOH A 70 770 145 HOH HOH . K 4 HOH A 71 771 41 HOH HOH . K 4 HOH A 72 772 149 HOH HOH . K 4 HOH A 73 773 162 HOH HOH . K 4 HOH A 74 774 146 HOH HOH . K 4 HOH A 75 775 138 HOH HOH . K 4 HOH A 76 776 49 HOH HOH . K 4 HOH A 77 777 122 HOH HOH . K 4 HOH A 78 778 164 HOH HOH . K 4 HOH A 79 779 59 HOH HOH . K 4 HOH A 80 780 147 HOH HOH . K 4 HOH A 81 781 131 HOH HOH . K 4 HOH A 82 782 167 HOH HOH . K 4 HOH A 83 783 163 HOH HOH . K 4 HOH A 84 784 121 HOH HOH . K 4 HOH A 85 785 109 HOH HOH . K 4 HOH A 86 786 144 HOH HOH . K 4 HOH A 87 787 155 HOH HOH . K 4 HOH A 88 788 139 HOH HOH . K 4 HOH A 89 789 120 HOH HOH . K 4 HOH A 90 790 91 HOH HOH . K 4 HOH A 91 791 154 HOH HOH . K 4 HOH A 92 792 148 HOH HOH . K 4 HOH A 93 793 93 HOH HOH . K 4 HOH A 94 794 124 HOH HOH . L 4 HOH B 1 601 14 HOH HOH . L 4 HOH B 2 602 166 HOH HOH . L 4 HOH B 3 603 23 HOH HOH . L 4 HOH B 4 604 38 HOH HOH . L 4 HOH B 5 605 13 HOH HOH . L 4 HOH B 6 606 140 HOH HOH . L 4 HOH B 7 607 61 HOH HOH . L 4 HOH B 8 608 27 HOH HOH . L 4 HOH B 9 609 141 HOH HOH . L 4 HOH B 10 610 105 HOH HOH . L 4 HOH B 11 611 161 HOH HOH . L 4 HOH B 12 612 159 HOH HOH . L 4 HOH B 13 613 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 4.313 -11.487 -10.745 1 11.25 ? C1 GOL 604 A 1 HETATM 2 O O1 GOL . . . F 3 5.572 -11.907 -10.271 1 10.09 ? O1 GOL 604 A 1 HETATM 3 C C2 GOL . . . F 3 3.258 -11.549 -9.645 1 13.92 ? C2 GOL 604 A 1 HETATM 4 O O2 GOL . . . F 3 3.637 -10.86 -8.476 1 14 ? O2 GOL 604 A 1 HETATM 5 C C3 GOL . . . F 3 2.822 -12.969 -9.327 1 11.58 ? C3 GOL 604 A 1 HETATM 6 O O3 GOL . . . F 3 1.645 -12.905 -8.553 1 11.69 ? O3 GOL 604 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #