data_4ZS2 # _model_server_result.job_id 3S_sdlZ-TdDmyxf0CjBHaw _model_server_result.datetime_utc '2024-11-27 03:19:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zs2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 4ZS2 # _exptl.entry_id 4ZS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 332.306 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZS2 _cell.length_a 142.66 _cell.length_b 142.66 _cell.length_c 83.218 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 50 A CYS 77 1_555 A SG CYS 365 A CYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc1 A OD1 ASP 206 A ASP 233 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc2 A NE2 HIS 280 A HIS 307 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc3 B O1 AKG . A AKG 601 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc4 B O5 AKG . A AKG 601 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc5 D MN MN . A MN 603 1_555 E O HOH . A HOH 753 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? # _chem_comp.formula 'C20 H12 O5' _chem_comp.formula_weight 332.306 _chem_comp.id FLU _chem_comp.mon_nstd_flag . _chem_comp.name '2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FLUORESCEIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 FLU sing 98 n n C1 C2 FLU doub 99 n y C1 C13 FLU sing 100 n y O1 HO1 FLU sing 101 n n C2 C3 FLU sing 102 n y C2 H2 FLU sing 103 n n C3 O2 FLU sing 104 n y C3 C11 FLU doub 105 n y O2 C4 FLU sing 106 n y C4 C5 FLU doub 107 n y C4 C9 FLU sing 108 n y C5 C6 FLU sing 109 n y C5 H5 FLU sing 110 n n C6 O3 FLU doub 111 n n C6 C7 FLU sing 112 n y C7 C8 FLU doub 113 n y C7 H7 FLU sing 114 n n C8 C9 FLU sing 115 n y C8 H8 FLU sing 116 n n C9 C10 FLU doub 117 n y C10 C11 FLU sing 118 n y C10 C14 FLU sing 119 n y C11 C12 FLU sing 120 n y C12 C13 FLU doub 121 n y C12 H12 FLU sing 122 n n C13 H13 FLU sing 123 n n C14 C15 FLU doub 124 n y C14 C19 FLU sing 125 n y C15 C16 FLU sing 126 n y C15 H15 FLU sing 127 n n C16 C17 FLU doub 128 n y C16 H16 FLU sing 129 n n C17 C18 FLU sing 130 n y C17 H17 FLU sing 131 n n C18 C19 FLU doub 132 n y C18 H18 FLU sing 133 n n C19 C20 FLU sing 134 n n C20 O4 FLU doub 135 n n C20 O5 FLU sing 136 n n O5 HO5 FLU sing 137 n n # _atom_sites.entry_id 4ZS2 _atom_sites.fract_transf_matrix[1][1] 0.00701 _atom_sites.fract_transf_matrix[1][2] 0.004047 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AKG A 1 601 1550 AKG AKG . C 3 FLU A 1 602 1 FLU FLU . D 4 MN A 1 603 1 MN MN . E 5 HOH A 1 701 70 HOH HOH . E 5 HOH A 2 702 92 HOH HOH . E 5 HOH A 3 703 65 HOH HOH . E 5 HOH A 4 704 56 HOH HOH . E 5 HOH A 5 705 103 HOH HOH . E 5 HOH A 6 706 36 HOH HOH . E 5 HOH A 7 707 13 HOH HOH . E 5 HOH A 8 708 80 HOH HOH . E 5 HOH A 9 709 57 HOH HOH . E 5 HOH A 10 710 62 HOH HOH . E 5 HOH A 11 711 63 HOH HOH . E 5 HOH A 12 712 16 HOH HOH . E 5 HOH A 13 713 97 HOH HOH . E 5 HOH A 14 714 42 HOH HOH . E 5 HOH A 15 715 90 HOH HOH . E 5 HOH A 16 716 91 HOH HOH . E 5 HOH A 17 717 74 HOH HOH . E 5 HOH A 18 718 15 HOH HOH . E 5 HOH A 19 719 85 HOH HOH . E 5 HOH A 20 720 51 HOH HOH . E 5 HOH A 21 721 8 HOH HOH . E 5 HOH A 22 722 3 HOH HOH . E 5 HOH A 23 723 98 HOH HOH . E 5 HOH A 24 724 14 HOH HOH . E 5 HOH A 25 725 89 HOH HOH . E 5 HOH A 26 726 72 HOH HOH . E 5 HOH A 27 727 26 HOH HOH . E 5 HOH A 28 728 78 HOH HOH . E 5 HOH A 29 729 6 HOH HOH . E 5 HOH A 30 730 87 HOH HOH . E 5 HOH A 31 731 38 HOH HOH . E 5 HOH A 32 732 40 HOH HOH . E 5 HOH A 33 733 81 HOH HOH . E 5 HOH A 34 734 52 HOH HOH . E 5 HOH A 35 735 67 HOH HOH . E 5 HOH A 36 736 7 HOH HOH . E 5 HOH A 37 737 23 HOH HOH . E 5 HOH A 38 738 20 HOH HOH . E 5 HOH A 39 739 66 HOH HOH . E 5 HOH A 40 740 96 HOH HOH . E 5 HOH A 41 741 11 HOH HOH . E 5 HOH A 42 742 9 HOH HOH . E 5 HOH A 43 743 12 HOH HOH . E 5 HOH A 44 744 43 HOH HOH . E 5 HOH A 45 745 50 HOH HOH . E 5 HOH A 46 746 77 HOH HOH . E 5 HOH A 47 747 49 HOH HOH . E 5 HOH A 48 748 27 HOH HOH . E 5 HOH A 49 749 45 HOH HOH . E 5 HOH A 50 750 100 HOH HOH . E 5 HOH A 51 751 71 HOH HOH . E 5 HOH A 52 752 29 HOH HOH . E 5 HOH A 53 753 94 HOH HOH . E 5 HOH A 54 754 83 HOH HOH . E 5 HOH A 55 755 41 HOH HOH . E 5 HOH A 56 756 4 HOH HOH . E 5 HOH A 57 757 34 HOH HOH . E 5 HOH A 58 758 47 HOH HOH . E 5 HOH A 59 759 48 HOH HOH . E 5 HOH A 60 760 86 HOH HOH . E 5 HOH A 61 761 64 HOH HOH . E 5 HOH A 62 762 19 HOH HOH . E 5 HOH A 63 763 37 HOH HOH . E 5 HOH A 64 764 18 HOH HOH . E 5 HOH A 65 765 46 HOH HOH . E 5 HOH A 66 766 101 HOH HOH . E 5 HOH A 67 767 53 HOH HOH . E 5 HOH A 68 768 59 HOH HOH . E 5 HOH A 69 769 44 HOH HOH . E 5 HOH A 70 770 28 HOH HOH . E 5 HOH A 71 771 75 HOH HOH . E 5 HOH A 72 772 54 HOH HOH . E 5 HOH A 73 773 79 HOH HOH . E 5 HOH A 74 774 5 HOH HOH . E 5 HOH A 75 775 84 HOH HOH . E 5 HOH A 76 776 99 HOH HOH . E 5 HOH A 77 777 17 HOH HOH . E 5 HOH A 78 778 10 HOH HOH . E 5 HOH A 79 779 76 HOH HOH . E 5 HOH A 80 780 25 HOH HOH . E 5 HOH A 81 781 95 HOH HOH . E 5 HOH A 82 782 31 HOH HOH . E 5 HOH A 83 783 21 HOH HOH . E 5 HOH A 84 784 93 HOH HOH . E 5 HOH A 85 785 22 HOH HOH . E 5 HOH A 86 786 61 HOH HOH . E 5 HOH A 87 787 102 HOH HOH . E 5 HOH A 88 788 73 HOH HOH . E 5 HOH A 89 789 30 HOH HOH . E 5 HOH A 90 790 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FLU . . . C 3 173.703 3.019 33.927 1 52.42 ? C1 FLU 602 A 1 HETATM 2 O O1 FLU . . . C 3 173.358 1.809 34.355 1 56.66 ? O1 FLU 602 A 1 HETATM 3 C C2 FLU . . . C 3 173.192 3.49 32.735 1 49.47 ? C2 FLU 602 A 1 HETATM 4 C C3 FLU . . . C 3 173.545 4.744 32.274 1 47.68 ? C3 FLU 602 A 1 HETATM 5 O O2 FLU . . . C 3 173.007 5.148 31.07 1 44.67 ? O2 FLU 602 A 1 HETATM 6 C C4 FLU . . . C 3 173.32 6.384 30.582 1 44.25 ? C4 FLU 602 A 1 HETATM 7 C C5 FLU . . . C 3 172.74 6.722 29.379 1 45.12 ? C5 FLU 602 A 1 HETATM 8 C C6 FLU . . . C 3 173.012 7.955 28.811 1 47.88 ? C6 FLU 602 A 1 HETATM 9 O O3 FLU . . . C 3 172.442 8.272 27.642 1 46.49 ? O3 FLU 602 A 1 HETATM 10 C C7 FLU . . . C 3 173.87 8.836 29.471 1 45.96 ? C7 FLU 602 A 1 HETATM 11 C C8 FLU . . . C 3 174.458 8.487 30.688 1 45.42 ? C8 FLU 602 A 1 HETATM 12 C C9 FLU . . . C 3 174.186 7.246 31.276 1 44.73 ? C9 FLU 602 A 1 HETATM 13 C C10 FLU . . . C 3 174.754 6.851 32.513 1 44.23 ? C10 FLU 602 A 1 HETATM 14 C C11 FLU . . . C 3 174.412 5.571 33 1 46.43 ? C11 FLU 602 A 1 HETATM 15 C C12 FLU . . . C 3 174.909 5.083 34.209 1 47.03 ? C12 FLU 602 A 1 HETATM 16 C C13 FLU . . . C 3 174.562 3.816 34.663 1 50.14 ? C13 FLU 602 A 1 HETATM 17 C C14 FLU . . . C 3 175.405 7.741 33.372 1 44.44 ? C14 FLU 602 A 1 HETATM 18 C C15 FLU . . . C 3 174.683 8.766 33.994 1 45.58 ? C15 FLU 602 A 1 HETATM 19 C C16 FLU . . . C 3 175.295 9.664 34.878 1 44.82 ? C16 FLU 602 A 1 HETATM 20 C C17 FLU . . . C 3 176.652 9.549 35.179 1 44.39 ? C17 FLU 602 A 1 HETATM 21 C C18 FLU . . . C 3 177.386 8.534 34.576 1 44.32 ? C18 FLU 602 A 1 HETATM 22 C C19 FLU . . . C 3 176.771 7.642 33.684 1 44.91 ? C19 FLU 602 A 1 HETATM 23 C C20 FLU . . . C 3 177.621 6.589 33.079 1 42.85 ? C20 FLU 602 A 1 HETATM 24 O O4 FLU . . . C 3 177.51 6.306 31.875 1 38.43 ? O4 FLU 602 A 1 HETATM 25 O O5 FLU . . . C 3 178.451 5.985 33.782 1 45.27 ? O5 FLU 602 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #