data_4ZS2 # _model_server_result.job_id hp7Jzm9PVOCETQkJD2YUhw _model_server_result.datetime_utc '2024-11-23 12:31:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zs2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 4ZS2 # _exptl.entry_id 4ZS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZS2 _cell.length_a 142.66 _cell.length_b 142.66 _cell.length_c 83.218 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 50 A CYS 77 1_555 A SG CYS 365 A CYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc1 A OD1 ASP 206 A ASP 233 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc2 A NE2 HIS 280 A HIS 307 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc3 B O1 AKG . A AKG 601 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc4 B O5 AKG . A AKG 601 1_555 D MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc5 D MN MN . A MN 603 1_555 E O HOH . A HOH 753 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZS2 _atom_sites.fract_transf_matrix[1][1] 0.00701 _atom_sites.fract_transf_matrix[1][2] 0.004047 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AKG A 1 601 1550 AKG AKG . C 3 FLU A 1 602 1 FLU FLU . D 4 MN A 1 603 1 MN MN . E 5 HOH A 1 701 70 HOH HOH . E 5 HOH A 2 702 92 HOH HOH . E 5 HOH A 3 703 65 HOH HOH . E 5 HOH A 4 704 56 HOH HOH . E 5 HOH A 5 705 103 HOH HOH . E 5 HOH A 6 706 36 HOH HOH . E 5 HOH A 7 707 13 HOH HOH . E 5 HOH A 8 708 80 HOH HOH . E 5 HOH A 9 709 57 HOH HOH . E 5 HOH A 10 710 62 HOH HOH . E 5 HOH A 11 711 63 HOH HOH . E 5 HOH A 12 712 16 HOH HOH . E 5 HOH A 13 713 97 HOH HOH . E 5 HOH A 14 714 42 HOH HOH . E 5 HOH A 15 715 90 HOH HOH . E 5 HOH A 16 716 91 HOH HOH . E 5 HOH A 17 717 74 HOH HOH . E 5 HOH A 18 718 15 HOH HOH . E 5 HOH A 19 719 85 HOH HOH . E 5 HOH A 20 720 51 HOH HOH . E 5 HOH A 21 721 8 HOH HOH . E 5 HOH A 22 722 3 HOH HOH . E 5 HOH A 23 723 98 HOH HOH . E 5 HOH A 24 724 14 HOH HOH . E 5 HOH A 25 725 89 HOH HOH . E 5 HOH A 26 726 72 HOH HOH . E 5 HOH A 27 727 26 HOH HOH . E 5 HOH A 28 728 78 HOH HOH . E 5 HOH A 29 729 6 HOH HOH . E 5 HOH A 30 730 87 HOH HOH . E 5 HOH A 31 731 38 HOH HOH . E 5 HOH A 32 732 40 HOH HOH . E 5 HOH A 33 733 81 HOH HOH . E 5 HOH A 34 734 52 HOH HOH . E 5 HOH A 35 735 67 HOH HOH . E 5 HOH A 36 736 7 HOH HOH . E 5 HOH A 37 737 23 HOH HOH . E 5 HOH A 38 738 20 HOH HOH . E 5 HOH A 39 739 66 HOH HOH . E 5 HOH A 40 740 96 HOH HOH . E 5 HOH A 41 741 11 HOH HOH . E 5 HOH A 42 742 9 HOH HOH . E 5 HOH A 43 743 12 HOH HOH . E 5 HOH A 44 744 43 HOH HOH . E 5 HOH A 45 745 50 HOH HOH . E 5 HOH A 46 746 77 HOH HOH . E 5 HOH A 47 747 49 HOH HOH . E 5 HOH A 48 748 27 HOH HOH . E 5 HOH A 49 749 45 HOH HOH . E 5 HOH A 50 750 100 HOH HOH . E 5 HOH A 51 751 71 HOH HOH . E 5 HOH A 52 752 29 HOH HOH . E 5 HOH A 53 753 94 HOH HOH . E 5 HOH A 54 754 83 HOH HOH . E 5 HOH A 55 755 41 HOH HOH . E 5 HOH A 56 756 4 HOH HOH . E 5 HOH A 57 757 34 HOH HOH . E 5 HOH A 58 758 47 HOH HOH . E 5 HOH A 59 759 48 HOH HOH . E 5 HOH A 60 760 86 HOH HOH . E 5 HOH A 61 761 64 HOH HOH . E 5 HOH A 62 762 19 HOH HOH . E 5 HOH A 63 763 37 HOH HOH . E 5 HOH A 64 764 18 HOH HOH . E 5 HOH A 65 765 46 HOH HOH . E 5 HOH A 66 766 101 HOH HOH . E 5 HOH A 67 767 53 HOH HOH . E 5 HOH A 68 768 59 HOH HOH . E 5 HOH A 69 769 44 HOH HOH . E 5 HOH A 70 770 28 HOH HOH . E 5 HOH A 71 771 75 HOH HOH . E 5 HOH A 72 772 54 HOH HOH . E 5 HOH A 73 773 79 HOH HOH . E 5 HOH A 74 774 5 HOH HOH . E 5 HOH A 75 775 84 HOH HOH . E 5 HOH A 76 776 99 HOH HOH . E 5 HOH A 77 777 17 HOH HOH . E 5 HOH A 78 778 10 HOH HOH . E 5 HOH A 79 779 76 HOH HOH . E 5 HOH A 80 780 25 HOH HOH . E 5 HOH A 81 781 95 HOH HOH . E 5 HOH A 82 782 31 HOH HOH . E 5 HOH A 83 783 21 HOH HOH . E 5 HOH A 84 784 93 HOH HOH . E 5 HOH A 85 785 22 HOH HOH . E 5 HOH A 86 786 61 HOH HOH . E 5 HOH A 87 787 102 HOH HOH . E 5 HOH A 88 788 73 HOH HOH . E 5 HOH A 89 789 30 HOH HOH . E 5 HOH A 90 790 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 173.075 _atom_site.Cartn_y 4.995 _atom_site.Cartn_z 23.739 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 603 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 410 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #