data_4ZSK # _model_server_result.job_id jR3bxu8ZGrroa2dAV7zWlQ _model_server_result.datetime_utc '2024-11-18 17:27:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4ZSK # _exptl.entry_id 4ZSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.188 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZSK _cell.length_a 54.211 _cell.length_b 54.211 _cell.length_c 222.512 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H16 N O9 P' _chem_comp.formula_weight 301.188 _chem_comp.id 16G _chem_comp.mon_nstd_flag n _chem_comp.name 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE;N-acetyl-6-O-phosphono-alpha-D-glucosamine;2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucose;2-acetamido-2-deoxy-6-O-phosphono-D-glucose;2-acetamido-2-deoxy-6-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 16G sing 1 n n C1 O1 16G sing 2 n n C1 O5 16G sing 3 n n C1 H1 16G sing 4 n n C2 C3 16G sing 5 n n C2 N2 16G sing 6 n n C2 H2 16G sing 7 n n C3 C4 16G sing 8 n n C3 O3 16G sing 9 n n C3 H3 16G sing 10 n n C4 C5 16G sing 11 n n C4 O4 16G sing 12 n n C4 H4 16G sing 13 n n C5 C6 16G sing 14 n n C5 O5 16G sing 15 n n C5 H5 16G sing 16 n n C6 O6 16G sing 17 n n C6 H61 16G sing 18 n n C6 H62 16G sing 19 n n C7 C8 16G sing 20 n n C7 N2 16G sing 21 n n C7 O7 16G doub 22 n n C8 H81 16G sing 23 n n C8 H82 16G sing 24 n n C8 H83 16G sing 25 n n N2 HN2 16G sing 26 n n O1 HO1 16G sing 27 n n O3 HO3 16G sing 28 n n O4 HO4 16G sing 29 n n O6 P 16G sing 30 n n P O1P 16G doub 31 n n P O2P 16G sing 32 n n P O3P 16G sing 33 n n O2P HOP2 16G sing 34 n n O3P HOP3 16G sing 35 n n # _pdbx_chem_comp_identifier.comp_id 16G _pdbx_chem_comp_identifier.identifier a-D-GlcpNAc6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 4ZSK _atom_sites.fract_transf_matrix[1][1] 0.018446 _atom_sites.fract_transf_matrix[1][2] 0.01065 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 16G A 1 301 1 16G 16G . D 3 EDO A 1 302 1 EDO EDO . E 3 EDO A 1 303 3 EDO EDO . F 4 4QY B 1 301 2 4QY B6P . G 3 EDO B 1 302 2 EDO EDO . H 3 EDO B 1 303 4 EDO EDO . I 5 HOH A 1 401 168 HOH HOH . I 5 HOH A 2 402 119 HOH HOH . I 5 HOH A 3 403 43 HOH HOH . I 5 HOH A 4 404 49 HOH HOH . I 5 HOH A 5 405 243 HOH HOH . I 5 HOH A 6 406 24 HOH HOH . I 5 HOH A 7 407 212 HOH HOH . I 5 HOH A 8 408 244 HOH HOH . I 5 HOH A 9 409 51 HOH HOH . I 5 HOH A 10 410 108 HOH HOH . I 5 HOH A 11 411 39 HOH HOH . I 5 HOH A 12 412 44 HOH HOH . I 5 HOH A 13 413 93 HOH HOH . I 5 HOH A 14 414 154 HOH HOH . I 5 HOH A 15 415 52 HOH HOH . I 5 HOH A 16 416 205 HOH HOH . I 5 HOH A 17 417 50 HOH HOH . I 5 HOH A 18 418 106 HOH HOH . I 5 HOH A 19 419 125 HOH HOH . I 5 HOH A 20 420 161 HOH HOH . I 5 HOH A 21 421 241 HOH HOH . I 5 HOH A 22 422 83 HOH HOH . I 5 HOH A 23 423 6 HOH HOH . I 5 HOH A 24 424 142 HOH HOH . I 5 HOH A 25 425 25 HOH HOH . I 5 HOH A 26 426 21 HOH HOH . I 5 HOH A 27 427 117 HOH HOH . I 5 HOH A 28 428 148 HOH HOH . I 5 HOH A 29 429 122 HOH HOH . I 5 HOH A 30 430 113 HOH HOH . I 5 HOH A 31 431 126 HOH HOH . I 5 HOH A 32 432 237 HOH HOH . I 5 HOH A 33 433 14 HOH HOH . I 5 HOH A 34 434 13 HOH HOH . I 5 HOH A 35 435 36 HOH HOH . I 5 HOH A 36 436 120 HOH HOH . I 5 HOH A 37 437 229 HOH HOH . I 5 HOH A 38 438 169 HOH HOH . I 5 HOH A 39 439 214 HOH HOH . I 5 HOH A 40 440 37 HOH HOH . I 5 HOH A 41 441 193 HOH HOH . I 5 HOH A 42 442 57 HOH HOH . I 5 HOH A 43 443 99 HOH HOH . I 5 HOH A 44 444 231 HOH HOH . I 5 HOH A 45 445 70 HOH HOH . I 5 HOH A 46 446 160 HOH HOH . I 5 HOH A 47 447 95 HOH HOH . I 5 HOH A 48 448 45 HOH HOH . I 5 HOH A 49 449 196 HOH HOH . I 5 HOH A 50 450 167 HOH HOH . I 5 HOH A 51 451 190 HOH HOH . I 5 HOH A 52 452 252 HOH HOH . I 5 HOH A 53 453 178 HOH HOH . I 5 HOH A 54 454 210 HOH HOH . I 5 HOH A 55 455 74 HOH HOH . I 5 HOH A 56 456 47 HOH HOH . I 5 HOH A 57 457 104 HOH HOH . I 5 HOH A 58 458 194 HOH HOH . I 5 HOH A 59 459 29 HOH HOH . I 5 HOH A 60 460 105 HOH HOH . I 5 HOH A 61 461 73 HOH HOH . I 5 HOH A 62 462 222 HOH HOH . I 5 HOH A 63 463 253 HOH HOH . I 5 HOH A 64 464 10 HOH HOH . I 5 HOH A 65 465 198 HOH HOH . I 5 HOH A 66 466 131 HOH HOH . I 5 HOH A 67 467 33 HOH HOH . I 5 HOH A 68 468 23 HOH HOH . I 5 HOH A 69 469 40 HOH HOH . I 5 HOH A 70 470 173 HOH HOH . I 5 HOH A 71 471 61 HOH HOH . I 5 HOH A 72 472 63 HOH HOH . I 5 HOH A 73 473 153 HOH HOH . I 5 HOH A 74 474 32 HOH HOH . I 5 HOH A 75 475 90 HOH HOH . I 5 HOH A 76 476 89 HOH HOH . I 5 HOH A 77 477 114 HOH HOH . I 5 HOH A 78 478 84 HOH HOH . I 5 HOH A 79 479 64 HOH HOH . I 5 HOH A 80 480 176 HOH HOH . I 5 HOH A 81 481 112 HOH HOH . I 5 HOH A 82 482 46 HOH HOH . I 5 HOH A 83 483 8 HOH HOH . I 5 HOH A 84 484 92 HOH HOH . I 5 HOH A 85 485 19 HOH HOH . I 5 HOH A 86 486 129 HOH HOH . I 5 HOH A 87 487 211 HOH HOH . I 5 HOH A 88 488 186 HOH HOH . I 5 HOH A 89 489 3 HOH HOH . I 5 HOH A 90 490 62 HOH HOH . I 5 HOH A 91 491 251 HOH HOH . I 5 HOH A 92 492 88 HOH HOH . I 5 HOH A 93 493 240 HOH HOH . I 5 HOH A 94 494 130 HOH HOH . I 5 HOH A 95 495 217 HOH HOH . I 5 HOH A 96 496 246 HOH HOH . I 5 HOH A 97 497 228 HOH HOH . I 5 HOH A 98 498 234 HOH HOH . I 5 HOH A 99 499 195 HOH HOH . I 5 HOH A 100 500 203 HOH HOH . I 5 HOH A 101 501 218 HOH HOH . I 5 HOH A 102 502 163 HOH HOH . I 5 HOH A 103 503 197 HOH HOH . I 5 HOH A 104 504 118 HOH HOH . I 5 HOH A 105 505 180 HOH HOH . I 5 HOH A 106 506 31 HOH HOH . I 5 HOH A 107 507 55 HOH HOH . I 5 HOH A 108 508 123 HOH HOH . I 5 HOH A 109 509 103 HOH HOH . I 5 HOH A 110 510 200 HOH HOH . I 5 HOH A 111 511 54 HOH HOH . I 5 HOH A 112 512 179 HOH HOH . I 5 HOH A 113 513 238 HOH HOH . I 5 HOH A 114 514 249 HOH HOH . I 5 HOH A 115 515 230 HOH HOH . I 5 HOH A 116 516 80 HOH HOH . I 5 HOH A 117 517 111 HOH HOH . I 5 HOH A 118 518 86 HOH HOH . I 5 HOH A 119 519 165 HOH HOH . I 5 HOH A 120 520 208 HOH HOH . I 5 HOH A 121 521 35 HOH HOH . I 5 HOH A 122 522 247 HOH HOH . I 5 HOH A 123 523 239 HOH HOH . J 5 HOH B 1 401 143 HOH HOH . J 5 HOH B 2 402 219 HOH HOH . J 5 HOH B 3 403 235 HOH HOH . J 5 HOH B 4 404 81 HOH HOH . J 5 HOH B 5 405 224 HOH HOH . J 5 HOH B 6 406 225 HOH HOH . J 5 HOH B 7 407 7 HOH HOH . J 5 HOH B 8 408 245 HOH HOH . J 5 HOH B 9 409 144 HOH HOH . J 5 HOH B 10 410 183 HOH HOH . J 5 HOH B 11 411 94 HOH HOH . J 5 HOH B 12 412 71 HOH HOH . J 5 HOH B 13 413 192 HOH HOH . J 5 HOH B 14 414 26 HOH HOH . J 5 HOH B 15 415 22 HOH HOH . J 5 HOH B 16 416 48 HOH HOH . J 5 HOH B 17 417 79 HOH HOH . J 5 HOH B 18 418 152 HOH HOH . J 5 HOH B 19 419 34 HOH HOH . J 5 HOH B 20 420 242 HOH HOH . J 5 HOH B 21 421 202 HOH HOH . J 5 HOH B 22 422 15 HOH HOH . J 5 HOH B 23 423 146 HOH HOH . J 5 HOH B 24 424 116 HOH HOH . J 5 HOH B 25 425 78 HOH HOH . J 5 HOH B 26 426 172 HOH HOH . J 5 HOH B 27 427 2 HOH HOH . J 5 HOH B 28 428 41 HOH HOH . J 5 HOH B 29 429 65 HOH HOH . J 5 HOH B 30 430 158 HOH HOH . J 5 HOH B 31 431 53 HOH HOH . J 5 HOH B 32 432 56 HOH HOH . J 5 HOH B 33 433 151 HOH HOH . J 5 HOH B 34 434 132 HOH HOH . J 5 HOH B 35 435 4 HOH HOH . J 5 HOH B 36 436 156 HOH HOH . J 5 HOH B 37 437 67 HOH HOH . J 5 HOH B 38 438 191 HOH HOH . J 5 HOH B 39 439 233 HOH HOH . J 5 HOH B 40 440 149 HOH HOH . J 5 HOH B 41 441 157 HOH HOH . J 5 HOH B 42 442 221 HOH HOH . J 5 HOH B 43 443 139 HOH HOH . J 5 HOH B 44 444 124 HOH HOH . J 5 HOH B 45 445 38 HOH HOH . J 5 HOH B 46 446 42 HOH HOH . J 5 HOH B 47 447 72 HOH HOH . J 5 HOH B 48 448 18 HOH HOH . J 5 HOH B 49 449 16 HOH HOH . J 5 HOH B 50 450 27 HOH HOH . J 5 HOH B 51 451 128 HOH HOH . J 5 HOH B 52 452 223 HOH HOH . J 5 HOH B 53 453 1 HOH HOH . J 5 HOH B 54 454 68 HOH HOH . J 5 HOH B 55 455 28 HOH HOH . J 5 HOH B 56 456 91 HOH HOH . J 5 HOH B 57 457 121 HOH HOH . J 5 HOH B 58 458 69 HOH HOH . J 5 HOH B 59 459 85 HOH HOH . J 5 HOH B 60 460 141 HOH HOH . J 5 HOH B 61 461 138 HOH HOH . J 5 HOH B 62 462 66 HOH HOH . J 5 HOH B 63 463 135 HOH HOH . J 5 HOH B 64 464 216 HOH HOH . J 5 HOH B 65 465 184 HOH HOH . J 5 HOH B 66 466 175 HOH HOH . J 5 HOH B 67 467 11 HOH HOH . J 5 HOH B 68 468 181 HOH HOH . J 5 HOH B 69 469 87 HOH HOH . J 5 HOH B 70 470 97 HOH HOH . J 5 HOH B 71 471 58 HOH HOH . J 5 HOH B 72 472 159 HOH HOH . J 5 HOH B 73 473 76 HOH HOH . J 5 HOH B 74 474 215 HOH HOH . J 5 HOH B 75 475 187 HOH HOH . J 5 HOH B 76 476 12 HOH HOH . J 5 HOH B 77 477 137 HOH HOH . J 5 HOH B 78 478 201 HOH HOH . J 5 HOH B 79 479 199 HOH HOH . J 5 HOH B 80 480 236 HOH HOH . J 5 HOH B 81 481 17 HOH HOH . J 5 HOH B 82 482 207 HOH HOH . J 5 HOH B 83 483 177 HOH HOH . J 5 HOH B 84 484 98 HOH HOH . J 5 HOH B 85 485 30 HOH HOH . J 5 HOH B 86 486 101 HOH HOH . J 5 HOH B 87 487 77 HOH HOH . J 5 HOH B 88 488 9 HOH HOH . J 5 HOH B 89 489 60 HOH HOH . J 5 HOH B 90 490 133 HOH HOH . J 5 HOH B 91 491 147 HOH HOH . J 5 HOH B 92 492 20 HOH HOH . J 5 HOH B 93 493 96 HOH HOH . J 5 HOH B 94 494 59 HOH HOH . J 5 HOH B 95 495 213 HOH HOH . J 5 HOH B 96 496 5 HOH HOH . J 5 HOH B 97 497 109 HOH HOH . J 5 HOH B 98 498 185 HOH HOH . J 5 HOH B 99 499 82 HOH HOH . J 5 HOH B 100 500 150 HOH HOH . J 5 HOH B 101 501 206 HOH HOH . J 5 HOH B 102 502 166 HOH HOH . J 5 HOH B 103 503 127 HOH HOH . J 5 HOH B 104 504 220 HOH HOH . J 5 HOH B 105 505 170 HOH HOH . J 5 HOH B 106 506 182 HOH HOH . J 5 HOH B 107 507 171 HOH HOH . J 5 HOH B 108 508 164 HOH HOH . J 5 HOH B 109 509 100 HOH HOH . J 5 HOH B 110 510 102 HOH HOH . J 5 HOH B 111 511 204 HOH HOH . J 5 HOH B 112 512 110 HOH HOH . J 5 HOH B 113 513 75 HOH HOH . J 5 HOH B 114 514 107 HOH HOH . J 5 HOH B 115 515 140 HOH HOH . J 5 HOH B 116 516 155 HOH HOH . J 5 HOH B 117 517 227 HOH HOH . J 5 HOH B 118 518 174 HOH HOH . J 5 HOH B 119 519 136 HOH HOH . J 5 HOH B 120 520 226 HOH HOH . J 5 HOH B 121 521 209 HOH HOH . J 5 HOH B 122 522 145 HOH HOH . J 5 HOH B 123 523 134 HOH HOH . J 5 HOH B 124 524 115 HOH HOH . J 5 HOH B 125 525 188 HOH HOH . J 5 HOH B 126 526 250 HOH HOH . J 5 HOH B 127 527 162 HOH HOH . J 5 HOH B 128 528 248 HOH HOH . J 5 HOH B 129 529 189 HOH HOH . J 5 HOH B 130 530 232 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 16G . . . C 2 -11.932 16.213 -11.773 1 34.11 ? C1 16G 301 A 1 HETATM 2 C C2 16G . . . C 2 -12.233 14.912 -11.01 1 30.09 ? C2 16G 301 A 1 HETATM 3 C C3 16G . . . C 2 -12.129 14.966 -9.482 1 23.66 ? C3 16G 301 A 1 HETATM 4 C C4 16G . . . C 2 -11.22 16.059 -8.948 1 29.67 ? C4 16G 301 A 1 HETATM 5 C C5 16G . . . C 2 -11.519 17.37 -9.667 1 30.47 ? C5 16G 301 A 1 HETATM 6 C C6 16G . . . C 2 -10.682 18.521 -9.12 1 26.88 ? C6 16G 301 A 1 HETATM 7 C C7 16G . . . C 2 -14.167 13.437 -11.512 1 39.79 ? C7 16G 301 A 1 HETATM 8 C C8 16G . . . C 2 -13.223 12.292 -11.549 1 36.91 ? C8 16G 301 A 1 HETATM 9 N N2 16G . . . C 2 -13.647 14.642 -11.267 1 39.74 ? N2 16G 301 A 1 HETATM 10 O O1 16G . . . C 2 -13.159 16.767 -12.262 1 33.95 ? O1 16G 301 A 1 HETATM 11 O O3 16G . . . C 2 -11.596 13.72 -9.026 1 32.79 ? O3 16G 301 A 1 HETATM 12 O O4 16G . . . C 2 -11.448 16.159 -7.524 1 29.07 ? O4 16G 301 A 1 HETATM 13 O O5 16G . . . C 2 -11.221 17.232 -11.057 1 25.83 ? O5 16G 301 A 1 HETATM 14 O O6 16G . . . C 2 -10.982 19.719 -9.851 1 30.45 ? O6 16G 301 A 1 HETATM 15 O O7 16G . . . C 2 -15.355 13.252 -11.72 1 52.8 ? O7 16G 301 A 1 HETATM 16 P P 16G . . . C 2 -10.52 21.166 -9.298 1 29.42 ? P 16G 301 A 1 HETATM 17 O O1P 16G . . . C 2 -10.915 22.083 -10.448 1 31.24 ? O1P 16G 301 A 1 HETATM 18 O O2P 16G . . . C 2 -9.03 21.044 -9.08 1 28.91 ? O2P 16G 301 A 1 HETATM 19 O O3P 16G . . . C 2 -11.308 21.415 -8.041 1 24.87 ? O3P 16G 301 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #