data_4ZU5
#
_model_server_result.job_id            GNVW1jJVm2xeEACDPjGCNQ 
_model_server_result.datetime_utc      '2024-11-30 02:25:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zu5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    4ZU5 
#
_exptl.entry_id    4ZU5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              368.463 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZU5 
_cell.length_a            93.742 
_cell.length_b            93.742 
_cell.length_c            95.623 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZU5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H36 O8' 
_chem_comp.formula_weight    368.463 
_chem_comp.id                PXN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'PENTAERYTHRITOL PROPOXYLATE (5/4 PO/OH)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAF CAA PXN sing 277 n n 
CAA HAA PXN sing 278 n n 
CAA HAAA PXN sing 279 n n 
CAA HAAB PXN sing 280 n n 
CAI CAB PXN sing 281 n n 
CAB HAB PXN sing 282 n n 
CAB HABA PXN sing 283 n n 
CAB HABB PXN sing 284 n n 
CAM CAC PXN sing 285 n n 
OAD CAC PXN sing 286 n n 
CAC HAC PXN sing 287 n n 
CAC HACA PXN sing 288 n n 
OAD CAE PXN sing 289 n n 
CAE CAF PXN sing 290 n n 
CAE HAE PXN sing 291 n n 
CAE HAEA PXN sing 292 n n 
CAF OAG PXN sing 293 n n 
CAF HAF PXN sing 294 n n 
OAG HOAG PXN sing 295 n n 
OAH CAI PXN sing 296 n n 
OAH HOAH PXN sing 297 n n 
CAI CAJ PXN sing 298 n n 
CAI HAI PXN sing 299 n n 
CAJ OAK PXN sing 300 n n 
CAJ HAJ PXN sing 301 n n 
CAJ HAJA PXN sing 302 n n 
OAK CAL PXN sing 303 n n 
CAL CAM PXN sing 304 n n 
CAL HAL PXN sing 305 n n 
CAL HALA PXN sing 306 n n 
CAM CAW PXN sing 307 n n 
CAM CAN PXN sing 308 n n 
OAO CAN PXN sing 309 n n 
CAN HAN PXN sing 310 n n 
CAN HANA PXN sing 311 n n 
OAO CAP PXN sing 312 n n 
CAQ CAP PXN sing 313 n n 
CAP HAP PXN sing 314 n n 
CAP HAPA PXN sing 315 n n 
CAX CAQ PXN sing 316 n n 
CAQ OAR PXN sing 317 n n 
CAQ HAQ PXN sing 318 n n 
OAR HOAR PXN sing 319 n n 
OAS CAT PXN sing 320 n n 
OAS HOAS PXN sing 321 n n 
CAU CAT PXN sing 322 n n 
CAT CAY PXN sing 323 n n 
CAT HAT PXN sing 324 n n 
OAV CAU PXN sing 325 n n 
CAU HAU PXN sing 326 n n 
CAU HAUA PXN sing 327 n n 
OAV CAW PXN sing 328 n n 
CAW HAW PXN sing 329 n n 
CAW HAWA PXN sing 330 n n 
CAX HAX PXN sing 331 n n 
CAX HAXA PXN sing 332 n n 
CAX HAXB PXN sing 333 n n 
CAY HAY PXN sing 334 n n 
CAY HAYA PXN sing 335 n n 
CAY HAYB PXN sing 336 n n 
#
_atom_sites.entry_id                     4ZU5 
_atom_sites.fract_transf_matrix[1][1]    0.010668 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010668 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010458 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 THM A 1 201 2 THM THM . 
D 3 PXN B 1 201 1 PXN PXN . 
E 2 THM B 1 202 1 THM THM . 
F 4 HOH A 1 301 66 HOH HOH . 
F 4 HOH A 2 302 49 HOH HOH . 
F 4 HOH A 3 303 29 HOH HOH . 
F 4 HOH A 4 304 67 HOH HOH . 
F 4 HOH A 5 305 13 HOH HOH . 
F 4 HOH A 6 306 52 HOH HOH . 
F 4 HOH A 7 307 21 HOH HOH . 
F 4 HOH A 8 308 55 HOH HOH . 
F 4 HOH A 9 309 25 HOH HOH . 
F 4 HOH A 10 310 65 HOH HOH . 
F 4 HOH A 11 311 2 HOH HOH . 
F 4 HOH A 12 312 51 HOH HOH . 
F 4 HOH A 13 313 30 HOH HOH . 
F 4 HOH A 14 314 16 HOH HOH . 
F 4 HOH A 15 315 82 HOH HOH . 
F 4 HOH A 16 316 7 HOH HOH . 
F 4 HOH A 17 317 59 HOH HOH . 
F 4 HOH A 18 318 48 HOH HOH . 
F 4 HOH A 19 319 50 HOH HOH . 
F 4 HOH A 20 320 24 HOH HOH . 
F 4 HOH A 21 321 63 HOH HOH . 
F 4 HOH A 22 322 64 HOH HOH . 
F 4 HOH A 23 323 1 HOH HOH . 
F 4 HOH A 24 324 26 HOH HOH . 
F 4 HOH A 25 325 11 HOH HOH . 
F 4 HOH A 26 326 27 HOH HOH . 
F 4 HOH A 27 327 9 HOH HOH . 
F 4 HOH A 28 328 32 HOH HOH . 
F 4 HOH A 29 329 62 HOH HOH . 
F 4 HOH A 30 330 12 HOH HOH . 
F 4 HOH A 31 331 58 HOH HOH . 
F 4 HOH A 32 332 20 HOH HOH . 
F 4 HOH A 33 333 56 HOH HOH . 
F 4 HOH A 34 334 4 HOH HOH . 
F 4 HOH A 35 335 81 HOH HOH . 
F 4 HOH A 36 336 28 HOH HOH . 
F 4 HOH A 37 337 23 HOH HOH . 
F 4 HOH A 38 338 10 HOH HOH . 
F 4 HOH A 39 339 15 HOH HOH . 
F 4 HOH A 40 340 46 HOH HOH . 
F 4 HOH A 41 341 31 HOH HOH . 
F 4 HOH A 42 342 57 HOH HOH . 
F 4 HOH A 43 343 80 HOH HOH . 
F 4 HOH A 44 344 22 HOH HOH . 
F 4 HOH A 45 345 60 HOH HOH . 
F 4 HOH A 46 346 54 HOH HOH . 
G 4 HOH B 1 301 6 HOH HOH . 
G 4 HOH B 2 302 84 HOH HOH . 
G 4 HOH B 3 303 78 HOH HOH . 
G 4 HOH B 4 304 37 HOH HOH . 
G 4 HOH B 5 305 70 HOH HOH . 
G 4 HOH B 6 306 14 HOH HOH . 
G 4 HOH B 7 307 33 HOH HOH . 
G 4 HOH B 8 308 8 HOH HOH . 
G 4 HOH B 9 309 36 HOH HOH . 
G 4 HOH B 10 310 75 HOH HOH . 
G 4 HOH B 11 311 19 HOH HOH . 
G 4 HOH B 12 312 40 HOH HOH . 
G 4 HOH B 13 313 72 HOH HOH . 
G 4 HOH B 14 314 43 HOH HOH . 
G 4 HOH B 15 315 69 HOH HOH . 
G 4 HOH B 16 316 79 HOH HOH . 
G 4 HOH B 17 317 3 HOH HOH . 
G 4 HOH B 18 318 47 HOH HOH . 
G 4 HOH B 19 319 76 HOH HOH . 
G 4 HOH B 20 320 17 HOH HOH . 
G 4 HOH B 21 321 41 HOH HOH . 
G 4 HOH B 22 322 34 HOH HOH . 
G 4 HOH B 23 323 74 HOH HOH . 
G 4 HOH B 24 324 83 HOH HOH . 
G 4 HOH B 25 325 85 HOH HOH . 
G 4 HOH B 26 326 71 HOH HOH . 
G 4 HOH B 27 327 35 HOH HOH . 
G 4 HOH B 28 328 39 HOH HOH . 
G 4 HOH B 29 329 77 HOH HOH . 
G 4 HOH B 30 330 38 HOH HOH . 
G 4 HOH B 31 331 42 HOH HOH . 
G 4 HOH B 32 332 5 HOH HOH . 
G 4 HOH B 33 333 44 HOH HOH . 
G 4 HOH B 34 334 73 HOH HOH . 
G 4 HOH B 35 335 68 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA PXN . . . D 3 16.149 -13.111 0.863 0.5 58.44 ? CAA PXN 201 B 1 
HETATM 2 C CAB PXN . . . D 3 19.036 -20.466 4.055 0.5 38.45 ? CAB PXN 201 B 1 
HETATM 3 C CAC PXN . . . D 3 17.052 -16.436 0.592 0.5 52.8 ? CAC PXN 201 B 1 
HETATM 4 O OAD PXN . . . D 3 17.089 -15.442 -0.429 0.5 57.97 ? OAD PXN 201 B 1 
HETATM 5 C CAE PXN . . . D 3 18.063 -14.44 -0.115 0.5 59.62 ? CAE PXN 201 B 1 
HETATM 6 C CAF PXN . . . D 3 17.413 -13.06 0.003 0.5 59.84 ? CAF PXN 201 B 1 
HETATM 7 O OAG PXN . . . D 3 18.392 -12.146 0.521 0.5 59.72 ? OAG PXN 201 B 1 
HETATM 8 O OAH PXN . . . D 3 20.243 -21.404 2.291 0.5 53.83 ? OAH PXN 201 B 1 
HETATM 9 C CAI PXN . . . D 3 19.423 -20.268 2.605 0.5 44.39 ? CAI PXN 201 B 1 
HETATM 10 C CAJ PXN . . . D 3 20.193 -18.996 2.276 0.5 43.38 ? CAJ PXN 201 B 1 
HETATM 11 O OAK PXN . . . D 3 19.524 -18.185 1.279 0.5 45.39 ? OAK PXN 201 B 1 
HETATM 12 C CAL PXN . . . D 3 18.154 -18.543 1.202 0.5 48.56 ? CAL PXN 201 B 1 
HETATM 13 C CAM PXN . . . D 3 17.362 -17.845 0.097 0.5 48.72 ? CAM PXN 201 B 1 
HETATM 14 C CAN PXN . . . D 3 16.067 -18.619 -0.012 0.5 52.32 ? CAN PXN 201 B 1 
HETATM 15 O OAO PXN . . . D 3 14.987 -17.695 -0.082 0.5 57.53 ? OAO PXN 201 B 1 
HETATM 16 C CAP PXN . . . D 3 13.767 -18.365 0.224 0.5 60.3 ? CAP PXN 201 B 1 
HETATM 17 C CAQ PXN . . . D 3 12.691 -17.927 -0.76 0.5 60.38 ? CAQ PXN 201 B 1 
HETATM 18 O OAR PXN . . . D 3 12.512 -16.502 -0.678 0.5 59.68 ? OAR PXN 201 B 1 
HETATM 19 O OAS PXN . . . D 3 21.453 -19.765 -2.202 0.5 42.38 ? OAS PXN 201 B 1 
HETATM 20 C CAT PXN . . . D 3 20.424 -19.891 -3.205 0.5 32.43 ? CAT PXN 201 B 1 
HETATM 21 C CAU PXN . . . D 3 19.037 -19.728 -2.613 0.5 34.43 ? CAU PXN 201 B 1 
HETATM 22 O OAV PXN . . . D 3 19.019 -18.821 -1.513 0.5 34.87 ? OAV PXN 201 B 1 
HETATM 23 C CAW PXN . . . D 3 17.939 -17.896 -1.328 0.5 43.79 ? CAW PXN 201 B 1 
HETATM 24 C CAX PXN . . . D 3 11.406 -18.694 -0.469 0.5 61.07 ? CAX PXN 201 B 1 
HETATM 25 C CAY PXN . . . D 3 20.632 -18.797 -4.22 0.5 29.16 ? CAY PXN 201 B 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           25 
#