data_4ZVF
#
_model_server_result.job_id            s0x9jKitV7wp79GEYFVInQ 
_model_server_result.datetime_utc      '2024-11-25 13:43:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zvf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4ZVF 
#
_exptl.entry_id    4ZVF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.08 
_cell.angle_gamma         90 
_cell.entry_id            4ZVF 
_cell.length_a            28.5 
_cell.length_b            52.53 
_cell.length_c            50.93 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZVF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 37 A ASP 333 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc2 A OD2 ASP 37 A ASP 333 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc3 A O VAL 38 A VAL 334 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc4 A OD2 ASP 80 A ASP 376 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 A OE2 GLU 81 A GLU 377 1_555 D CA CA . A CA 503 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc6 A OE2 GLU 81 A GLU 377 1_555 D CA CA . A CA 503 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc7 B O1B GAV . A GAV 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc8 B O2G GAV . A GAV 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc9 C CA CA . A CA 502 1_555 G O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
metalc ? metalc10 D CA CA . A CA 503 1_555 G O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc11 D CA CA . A CA 503 1_555 G O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc12 D CA CA . A CA 503 1_555 G O HOH . A HOH 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? 
metalc ? metalc13 D CA CA . A CA 503 1_555 G O HOH . A HOH 732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? 
metalc ? metalc14 D CA CA . A CA 503 1_555 G O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4ZVF 
_atom_sites.fract_transf_matrix[1][1]    0.035088 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.010117 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019037 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020435 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GAV A 1 501 600 GAV GAV . 
C 3 CA A 1 502 1 CA CA . 
D 3 CA A 1 503 1 CA CA . 
E 4 EDO A 1 504 1 EDO EDO . 
F 4 EDO A 1 505 2 EDO EDO . 
G 5 HOH A 1 601 62 HOH HOH . 
G 5 HOH A 2 602 141 HOH HOH . 
G 5 HOH A 3 603 65 HOH HOH . 
G 5 HOH A 4 604 56 HOH HOH . 
G 5 HOH A 5 605 81 HOH HOH . 
G 5 HOH A 6 606 92 HOH HOH . 
G 5 HOH A 7 607 3 HOH HOH . 
G 5 HOH A 8 608 45 HOH HOH . 
G 5 HOH A 9 609 102 HOH HOH . 
G 5 HOH A 10 610 176 HOH HOH . 
G 5 HOH A 11 611 80 HOH HOH . 
G 5 HOH A 12 612 86 HOH HOH . 
G 5 HOH A 13 613 37 HOH HOH . 
G 5 HOH A 14 614 28 HOH HOH . 
G 5 HOH A 15 615 164 HOH HOH . 
G 5 HOH A 16 616 90 HOH HOH . 
G 5 HOH A 17 617 180 HOH HOH . 
G 5 HOH A 18 618 57 HOH HOH . 
G 5 HOH A 19 619 163 HOH HOH . 
G 5 HOH A 20 620 151 HOH HOH . 
G 5 HOH A 21 621 38 HOH HOH . 
G 5 HOH A 22 622 84 HOH HOH . 
G 5 HOH A 23 623 29 HOH HOH . 
G 5 HOH A 24 624 61 HOH HOH . 
G 5 HOH A 25 625 127 HOH HOH . 
G 5 HOH A 26 626 148 HOH HOH . 
G 5 HOH A 27 627 6 HOH HOH . 
G 5 HOH A 28 628 58 HOH HOH . 
G 5 HOH A 29 629 32 HOH HOH . 
G 5 HOH A 30 630 131 HOH HOH . 
G 5 HOH A 31 631 39 HOH HOH . 
G 5 HOH A 32 632 40 HOH HOH . 
G 5 HOH A 33 633 34 HOH HOH . 
G 5 HOH A 34 634 168 HOH HOH . 
G 5 HOH A 35 635 4 HOH HOH . 
G 5 HOH A 36 636 25 HOH HOH . 
G 5 HOH A 37 637 15 HOH HOH . 
G 5 HOH A 38 638 113 HOH HOH . 
G 5 HOH A 39 639 21 HOH HOH . 
G 5 HOH A 40 640 94 HOH HOH . 
G 5 HOH A 41 641 2 HOH HOH . 
G 5 HOH A 42 642 157 HOH HOH . 
G 5 HOH A 43 643 149 HOH HOH . 
G 5 HOH A 44 644 49 HOH HOH . 
G 5 HOH A 45 645 160 HOH HOH . 
G 5 HOH A 46 646 115 HOH HOH . 
G 5 HOH A 47 647 116 HOH HOH . 
G 5 HOH A 48 648 75 HOH HOH . 
G 5 HOH A 49 649 23 HOH HOH . 
G 5 HOH A 50 650 44 HOH HOH . 
G 5 HOH A 51 651 96 HOH HOH . 
G 5 HOH A 52 652 7 HOH HOH . 
G 5 HOH A 53 653 112 HOH HOH . 
G 5 HOH A 54 654 46 HOH HOH . 
G 5 HOH A 55 655 31 HOH HOH . 
G 5 HOH A 56 656 11 HOH HOH . 
G 5 HOH A 57 657 59 HOH HOH . 
G 5 HOH A 58 658 99 HOH HOH . 
G 5 HOH A 59 659 27 HOH HOH . 
G 5 HOH A 60 660 52 HOH HOH . 
G 5 HOH A 61 661 19 HOH HOH . 
G 5 HOH A 62 662 14 HOH HOH . 
G 5 HOH A 63 663 43 HOH HOH . 
G 5 HOH A 64 664 50 HOH HOH . 
G 5 HOH A 65 665 122 HOH HOH . 
G 5 HOH A 66 666 126 HOH HOH . 
G 5 HOH A 67 667 98 HOH HOH . 
G 5 HOH A 68 668 41 HOH HOH . 
G 5 HOH A 69 669 95 HOH HOH . 
G 5 HOH A 70 670 17 HOH HOH . 
G 5 HOH A 71 671 8 HOH HOH . 
G 5 HOH A 72 672 26 HOH HOH . 
G 5 HOH A 73 673 42 HOH HOH . 
G 5 HOH A 74 674 182 HOH HOH . 
G 5 HOH A 75 675 60 HOH HOH . 
G 5 HOH A 76 676 73 HOH HOH . 
G 5 HOH A 77 677 87 HOH HOH . 
G 5 HOH A 78 678 64 HOH HOH . 
G 5 HOH A 79 679 85 HOH HOH . 
G 5 HOH A 80 680 13 HOH HOH . 
G 5 HOH A 81 681 111 HOH HOH . 
G 5 HOH A 82 682 70 HOH HOH . 
G 5 HOH A 83 683 117 HOH HOH . 
G 5 HOH A 84 684 1 HOH HOH . 
G 5 HOH A 85 685 89 HOH HOH . 
G 5 HOH A 86 686 5 HOH HOH . 
G 5 HOH A 87 687 18 HOH HOH . 
G 5 HOH A 88 688 22 HOH HOH . 
G 5 HOH A 89 689 76 HOH HOH . 
G 5 HOH A 90 690 100 HOH HOH . 
G 5 HOH A 91 691 36 HOH HOH . 
G 5 HOH A 92 692 192 HOH HOH . 
G 5 HOH A 93 693 132 HOH HOH . 
G 5 HOH A 94 694 67 HOH HOH . 
G 5 HOH A 95 695 53 HOH HOH . 
G 5 HOH A 96 696 145 HOH HOH . 
G 5 HOH A 97 697 16 HOH HOH . 
G 5 HOH A 98 698 83 HOH HOH . 
G 5 HOH A 99 699 51 HOH HOH . 
G 5 HOH A 100 700 66 HOH HOH . 
G 5 HOH A 101 701 30 HOH HOH . 
G 5 HOH A 102 702 35 HOH HOH . 
G 5 HOH A 103 703 177 HOH HOH . 
G 5 HOH A 104 704 109 HOH HOH . 
G 5 HOH A 105 705 130 HOH HOH . 
G 5 HOH A 106 706 135 HOH HOH . 
G 5 HOH A 107 707 105 HOH HOH . 
G 5 HOH A 108 708 54 HOH HOH . 
G 5 HOH A 109 709 144 HOH HOH . 
G 5 HOH A 110 710 97 HOH HOH . 
G 5 HOH A 111 711 91 HOH HOH . 
G 5 HOH A 112 712 156 HOH HOH . 
G 5 HOH A 113 713 169 HOH HOH . 
G 5 HOH A 114 714 165 HOH HOH . 
G 5 HOH A 115 715 20 HOH HOH . 
G 5 HOH A 116 716 121 HOH HOH . 
G 5 HOH A 117 717 166 HOH HOH . 
G 5 HOH A 118 718 124 HOH HOH . 
G 5 HOH A 119 719 10 HOH HOH . 
G 5 HOH A 120 720 104 HOH HOH . 
G 5 HOH A 121 721 24 HOH HOH . 
G 5 HOH A 122 722 79 HOH HOH . 
G 5 HOH A 123 723 195 HOH HOH . 
G 5 HOH A 124 724 137 HOH HOH . 
G 5 HOH A 125 725 48 HOH HOH . 
G 5 HOH A 126 726 171 HOH HOH . 
G 5 HOH A 127 727 194 HOH HOH . 
G 5 HOH A 128 728 82 HOH HOH . 
G 5 HOH A 129 729 63 HOH HOH . 
G 5 HOH A 130 730 123 HOH HOH . 
G 5 HOH A 131 731 119 HOH HOH . 
G 5 HOH A 132 732 190 HOH HOH . 
G 5 HOH A 133 733 118 HOH HOH . 
G 5 HOH A 134 734 159 HOH HOH . 
G 5 HOH A 135 735 77 HOH HOH . 
G 5 HOH A 136 736 167 HOH HOH . 
G 5 HOH A 137 737 133 HOH HOH . 
G 5 HOH A 138 738 55 HOH HOH . 
G 5 HOH A 139 739 155 HOH HOH . 
G 5 HOH A 140 740 158 HOH HOH . 
G 5 HOH A 141 741 140 HOH HOH . 
G 5 HOH A 142 742 47 HOH HOH . 
G 5 HOH A 143 743 71 HOH HOH . 
G 5 HOH A 144 744 162 HOH HOH . 
G 5 HOH A 145 745 129 HOH HOH . 
G 5 HOH A 146 746 170 HOH HOH . 
G 5 HOH A 147 747 68 HOH HOH . 
G 5 HOH A 148 748 150 HOH HOH . 
G 5 HOH A 149 749 78 HOH HOH . 
G 5 HOH A 150 750 72 HOH HOH . 
G 5 HOH A 151 751 186 HOH HOH . 
G 5 HOH A 152 752 139 HOH HOH . 
G 5 HOH A 153 753 189 HOH HOH . 
G 5 HOH A 154 754 69 HOH HOH . 
G 5 HOH A 155 755 136 HOH HOH . 
G 5 HOH A 156 756 178 HOH HOH . 
G 5 HOH A 157 757 88 HOH HOH . 
G 5 HOH A 158 758 107 HOH HOH . 
G 5 HOH A 159 759 103 HOH HOH . 
G 5 HOH A 160 760 114 HOH HOH . 
G 5 HOH A 161 761 172 HOH HOH . 
G 5 HOH A 162 762 146 HOH HOH . 
G 5 HOH A 163 763 185 HOH HOH . 
G 5 HOH A 164 764 108 HOH HOH . 
G 5 HOH A 165 765 33 HOH HOH . 
G 5 HOH A 166 766 101 HOH HOH . 
G 5 HOH A 167 767 193 HOH HOH . 
G 5 HOH A 168 768 184 HOH HOH . 
G 5 HOH A 169 769 181 HOH HOH . 
G 5 HOH A 170 770 173 HOH HOH . 
G 5 HOH A 171 771 128 HOH HOH . 
G 5 HOH A 172 772 183 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -2.862 
_atom_site.Cartn_y               -15.187 
_atom_site.Cartn_z               13.261 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        12.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           237 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#