data_4ZW9 # _model_server_result.job_id k8VlwLzmK8zwqc9_st0swQ _model_server_result.datetime_utc '2024-11-22 20:52:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 4ZW9 # _exptl.entry_id 4ZW9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.67 _cell.angle_gamma 90 _cell.entry_id 4ZW9 _cell.length_a 48.338 _cell.length_b 118.132 _cell.length_c 51.341 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4ZW9 _atom_sites.fract_transf_matrix[1][1] 0.020688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004652 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008465 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 501 1 OLC OLC . C 2 OLC A 1 502 2 OLC OLC . D 2 OLC A 1 503 3 OLC OLC . E 3 GLC A 1 504 1 GLC AGC . F 4 BGC A 1 505 2 BGC BGC . G 5 HOH A 1 601 34 HOH HOH . G 5 HOH A 2 602 39 HOH HOH . G 5 HOH A 3 603 146 HOH HOH . G 5 HOH A 4 604 66 HOH HOH . G 5 HOH A 5 605 130 HOH HOH . G 5 HOH A 6 606 142 HOH HOH . G 5 HOH A 7 607 105 HOH HOH . G 5 HOH A 8 608 120 HOH HOH . G 5 HOH A 9 609 56 HOH HOH . G 5 HOH A 10 610 90 HOH HOH . G 5 HOH A 11 611 28 HOH HOH . G 5 HOH A 12 612 144 HOH HOH . G 5 HOH A 13 613 38 HOH HOH . G 5 HOH A 14 614 164 HOH HOH . G 5 HOH A 15 615 129 HOH HOH . G 5 HOH A 16 616 172 HOH HOH . G 5 HOH A 17 617 43 HOH HOH . G 5 HOH A 18 618 14 HOH HOH . G 5 HOH A 19 619 26 HOH HOH . G 5 HOH A 20 620 33 HOH HOH . G 5 HOH A 21 621 35 HOH HOH . G 5 HOH A 22 622 50 HOH HOH . G 5 HOH A 23 623 131 HOH HOH . G 5 HOH A 24 624 11 HOH HOH . G 5 HOH A 25 625 49 HOH HOH . G 5 HOH A 26 626 19 HOH HOH . G 5 HOH A 27 627 78 HOH HOH . G 5 HOH A 28 628 10 HOH HOH . G 5 HOH A 29 629 83 HOH HOH . G 5 HOH A 30 630 46 HOH HOH . G 5 HOH A 31 631 37 HOH HOH . G 5 HOH A 32 632 75 HOH HOH . G 5 HOH A 33 633 8 HOH HOH . G 5 HOH A 34 634 21 HOH HOH . G 5 HOH A 35 635 9 HOH HOH . G 5 HOH A 36 636 85 HOH HOH . G 5 HOH A 37 637 67 HOH HOH . G 5 HOH A 38 638 36 HOH HOH . G 5 HOH A 39 639 45 HOH HOH . G 5 HOH A 40 640 41 HOH HOH . G 5 HOH A 41 641 174 HOH HOH . G 5 HOH A 42 642 63 HOH HOH . G 5 HOH A 43 643 20 HOH HOH . G 5 HOH A 44 644 25 HOH HOH . G 5 HOH A 45 645 40 HOH HOH . G 5 HOH A 46 646 158 HOH HOH . G 5 HOH A 47 647 3 HOH HOH . G 5 HOH A 48 648 51 HOH HOH . G 5 HOH A 49 649 12 HOH HOH . G 5 HOH A 50 650 22 HOH HOH . G 5 HOH A 51 651 79 HOH HOH . G 5 HOH A 52 652 4 HOH HOH . G 5 HOH A 53 653 23 HOH HOH . G 5 HOH A 54 654 18 HOH HOH . G 5 HOH A 55 655 171 HOH HOH . G 5 HOH A 56 656 30 HOH HOH . G 5 HOH A 57 657 55 HOH HOH . G 5 HOH A 58 658 13 HOH HOH . G 5 HOH A 59 659 173 HOH HOH . G 5 HOH A 60 660 77 HOH HOH . G 5 HOH A 61 661 29 HOH HOH . G 5 HOH A 62 662 119 HOH HOH . G 5 HOH A 63 663 88 HOH HOH . G 5 HOH A 64 664 128 HOH HOH . G 5 HOH A 65 665 124 HOH HOH . G 5 HOH A 66 666 16 HOH HOH . G 5 HOH A 67 667 134 HOH HOH . G 5 HOH A 68 668 31 HOH HOH . G 5 HOH A 69 669 93 HOH HOH . G 5 HOH A 70 670 72 HOH HOH . G 5 HOH A 71 671 95 HOH HOH . G 5 HOH A 72 672 65 HOH HOH . G 5 HOH A 73 673 145 HOH HOH . G 5 HOH A 74 674 62 HOH HOH . G 5 HOH A 75 675 54 HOH HOH . G 5 HOH A 76 676 153 HOH HOH . G 5 HOH A 77 677 64 HOH HOH . G 5 HOH A 78 678 104 HOH HOH . G 5 HOH A 79 679 69 HOH HOH . G 5 HOH A 80 680 17 HOH HOH . G 5 HOH A 81 681 125 HOH HOH . G 5 HOH A 82 682 133 HOH HOH . G 5 HOH A 83 683 98 HOH HOH . G 5 HOH A 84 684 97 HOH HOH . G 5 HOH A 85 685 71 HOH HOH . G 5 HOH A 86 686 169 HOH HOH . G 5 HOH A 87 687 81 HOH HOH . G 5 HOH A 88 688 135 HOH HOH . G 5 HOH A 89 689 139 HOH HOH . G 5 HOH A 90 690 107 HOH HOH . G 5 HOH A 91 691 112 HOH HOH . G 5 HOH A 92 692 155 HOH HOH . G 5 HOH A 93 693 87 HOH HOH . G 5 HOH A 94 694 161 HOH HOH . G 5 HOH A 95 695 109 HOH HOH . G 5 HOH A 96 696 103 HOH HOH . G 5 HOH A 97 697 116 HOH HOH . G 5 HOH A 98 698 163 HOH HOH . G 5 HOH A 99 699 68 HOH HOH . G 5 HOH A 100 700 168 HOH HOH . G 5 HOH A 101 701 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . B . F 4 59.467 9.362 58.293 0.31 17.92 ? C2 BGC 505 A 1 HETATM 2 C C3 BGC . B . F 4 59.002 10.793 58.537 0.31 18.14 ? C3 BGC 505 A 1 HETATM 3 C C4 BGC . B . F 4 59.453 11.713 57.41 0.31 18.46 ? C4 BGC 505 A 1 HETATM 4 C C5 BGC . B . F 4 59.108 11.12 56.049 0.31 18.32 ? C5 BGC 505 A 1 HETATM 5 C C6 BGC . B . F 4 59.626 12.004 54.921 0.31 18.6 ? C6 BGC 505 A 1 HETATM 6 C C1 BGC . B . F 4 59.12 8.91 56.88 0.31 17.85 ? C1 BGC 505 A 1 HETATM 7 O O1 BGC . B . F 4 59.653 7.6 56.654 0.31 17.75 ? O1 BGC 505 A 1 HETATM 8 O O2 BGC . B . F 4 58.843 8.489 59.241 0.31 17.72 ? O2 BGC 505 A 1 HETATM 9 O O3 BGC . B . F 4 59.536 11.263 59.78 0.31 18.25 ? O3 BGC 505 A 1 HETATM 10 O O4 BGC . B . F 4 58.816 12.988 57.551 0.31 18.74 ? O4 BGC 505 A 1 HETATM 11 O O5 BGC . B . F 4 59.683 9.82 55.938 0.31 18.1 ? O5 BGC 505 A 1 HETATM 12 O O6 BGC . B . F 4 59.346 11.383 53.662 0.31 18.49 ? O6 BGC 505 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #