data_4ZXI
#
_model_server_result.job_id            wlrMChGUQRpEsbz794CO7g 
_model_server_result.datetime_utc      '2024-11-13 12:04:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zxi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1402}' 
#
_entry.id    4ZXI 
#
_exptl.entry_id    4ZXI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              75.067 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZXI 
_cell.length_a            116.1 
_cell.length_b            116.1 
_cell.length_c            342.02 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 4ZXI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N HIS 2 A HIS 0 1_555 F NI NI . A NI 1405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc2 A ND1 HIS 2 A HIS 0 1_555 F NI NI . A NI 1405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc3 A OG1 THR 766 A THR 764 1_555 G MG MG . A MG 1406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? 
covale ? covale1 A OG SER 1008 A SER 1006 1_555 B P24 PNS . A PNS 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? 
metalc ? metalc4 C O GLY . A GLY 1402 1_555 G MG MG . A MG 1406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? 
metalc ? metalc5 D O5' AMP . A AMP 1403 1_555 G MG MG . A MG 1406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? 
metalc ? metalc6 A NE2 HIS 526 A HIS 524 1_555 F NI NI . A NI 1405 5_454 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
#
_chem_comp.formula           'C2 H5 N O2' 
_chem_comp.formula_weight    75.067 
_chem_comp.id                GLY 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              GLYCINE 
_chem_comp.type              'peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4ZXI 
_atom_sites.fract_transf_matrix[1][1]    0.008613 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008613 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002924 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PNS A 1 1401 1319 PNS PNS . 
C 3 GLY A 1 1402 1 GLY GLY . 
D 4 AMP A 1 1403 2 AMP AMP . 
E 5 XP4 A 1 1404 1 XP4 XP4 . 
F 6 NI A 1 1405 1 NI NI . 
G 7 MG A 1 1406 1 MG MG . 
H 8 HOH A 1 1501 1 HOH HOH . 
H 8 HOH A 2 1502 6 HOH HOH . 
H 8 HOH A 3 1503 10 HOH HOH . 
H 8 HOH A 4 1504 11 HOH HOH . 
H 8 HOH A 5 1505 14 HOH HOH . 
H 8 HOH A 6 1506 2 HOH HOH . 
H 8 HOH A 7 1507 16 HOH HOH . 
H 8 HOH A 8 1508 7 HOH HOH . 
H 8 HOH A 9 1509 8 HOH HOH . 
H 8 HOH A 10 1510 12 HOH HOH . 
H 8 HOH A 11 1511 3 HOH HOH . 
H 8 HOH A 12 1512 13 HOH HOH . 
H 8 HOH A 13 1513 9 HOH HOH . 
H 8 HOH A 14 1514 4 HOH HOH . 
H 8 HOH A 15 1515 5 HOH HOH . 
H 8 HOH A 16 1516 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLY . . . C 3 -40.258 -29.41 -45.29 1 31.9 ? N GLY 1402 A 1 
HETATM 2 C CA GLY . . . C 3 -40.337 -30.684 -44.59 1 47.91 ? CA GLY 1402 A 1 
HETATM 3 C C GLY . . . C 3 -40.67 -30.585 -43.101 1 58.78 ? C GLY 1402 A 1 
HETATM 4 O O GLY . . . C 3 -41.024 -29.522 -42.583 1 60.98 ? O GLY 1402 A 1 
HETATM 5 O OXT GLY . . . C 3 -40.604 -31.579 -42.362 1 58.7 ? OXT GLY 1402 A 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           5 
#