data_4ZXR
#
_model_server_result.job_id            VoE13UTIjm91V9Jx3n6ikw 
_model_server_result.datetime_utc      '2024-11-23 06:56:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4zxr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4ZXR 
#
_exptl.entry_id    4ZXR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4ZXR 
_cell.length_a            59.079 
_cell.length_b            59.079 
_cell.length_c            151.22 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ZXR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 66 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf3 A SG CYS 71 A CYS 71 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 A SG CYS 121 A CYS 121 1_555 A SG CYS 193 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf5 A SG CYS 126 A CYS 126 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf6 A SG CYS 134 A CYS 134 1_555 A SG CYS 145 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf7 A SG CYS 149 A CYS 149 1_555 A SG CYS 158 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf8 A SG CYS 159 A CYS 159 1_555 A SG CYS 164 A CYS 164 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf9 A SG CYS 159 A CYS 159 1_555 A SG CYS 164 A CYS 164 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4ZXR 
_atom_sites.fract_transf_matrix[1][1]    0.016926 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016926 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006613 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TLA A 1 501 501 TLA TAR . 
C 3 GOL A 1 502 502 GOL GOL . 
D 3 GOL A 1 503 503 GOL GOL . 
E 4 HOH A 1 601 34 HOH HOH . 
E 4 HOH A 2 602 77 HOH HOH . 
E 4 HOH A 3 603 67 HOH HOH . 
E 4 HOH A 4 604 33 HOH HOH . 
E 4 HOH A 5 605 14 HOH HOH . 
E 4 HOH A 6 606 9 HOH HOH . 
E 4 HOH A 7 607 79 HOH HOH . 
E 4 HOH A 8 608 44 HOH HOH . 
E 4 HOH A 9 609 22 HOH HOH . 
E 4 HOH A 10 610 31 HOH HOH . 
E 4 HOH A 11 611 4 HOH HOH . 
E 4 HOH A 12 612 28 HOH HOH . 
E 4 HOH A 13 613 40 HOH HOH . 
E 4 HOH A 14 614 17 HOH HOH . 
E 4 HOH A 15 615 24 HOH HOH . 
E 4 HOH A 16 616 70 HOH HOH . 
E 4 HOH A 17 617 10 HOH HOH . 
E 4 HOH A 18 618 47 HOH HOH . 
E 4 HOH A 19 619 58 HOH HOH . 
E 4 HOH A 20 620 6 HOH HOH . 
E 4 HOH A 21 621 71 HOH HOH . 
E 4 HOH A 22 622 54 HOH HOH . 
E 4 HOH A 23 623 18 HOH HOH . 
E 4 HOH A 24 624 3 HOH HOH . 
E 4 HOH A 25 625 29 HOH HOH . 
E 4 HOH A 26 626 12 HOH HOH . 
E 4 HOH A 27 627 5 HOH HOH . 
E 4 HOH A 28 628 20 HOH HOH . 
E 4 HOH A 29 629 11 HOH HOH . 
E 4 HOH A 30 630 1 HOH HOH . 
E 4 HOH A 31 631 19 HOH HOH . 
E 4 HOH A 32 632 35 HOH HOH . 
E 4 HOH A 33 633 74 HOH HOH . 
E 4 HOH A 34 634 8 HOH HOH . 
E 4 HOH A 35 635 23 HOH HOH . 
E 4 HOH A 36 636 42 HOH HOH . 
E 4 HOH A 37 637 16 HOH HOH . 
E 4 HOH A 38 638 57 HOH HOH . 
E 4 HOH A 39 639 75 HOH HOH . 
E 4 HOH A 40 640 53 HOH HOH . 
E 4 HOH A 41 641 65 HOH HOH . 
E 4 HOH A 42 642 52 HOH HOH . 
E 4 HOH A 43 643 36 HOH HOH . 
E 4 HOH A 44 644 39 HOH HOH . 
E 4 HOH A 45 645 15 HOH HOH . 
E 4 HOH A 46 646 48 HOH HOH . 
E 4 HOH A 47 647 2 HOH HOH . 
E 4 HOH A 48 648 25 HOH HOH . 
E 4 HOH A 49 649 60 HOH HOH . 
E 4 HOH A 50 650 13 HOH HOH . 
E 4 HOH A 51 651 45 HOH HOH . 
E 4 HOH A 52 652 69 HOH HOH . 
E 4 HOH A 53 653 46 HOH HOH . 
E 4 HOH A 54 654 27 HOH HOH . 
E 4 HOH A 55 655 64 HOH HOH . 
E 4 HOH A 56 656 72 HOH HOH . 
E 4 HOH A 57 657 84 HOH HOH . 
E 4 HOH A 58 658 32 HOH HOH . 
E 4 HOH A 59 659 80 HOH HOH . 
E 4 HOH A 60 660 51 HOH HOH . 
E 4 HOH A 61 661 37 HOH HOH . 
E 4 HOH A 62 662 76 HOH HOH . 
E 4 HOH A 63 663 21 HOH HOH . 
E 4 HOH A 64 664 26 HOH HOH . 
E 4 HOH A 65 665 68 HOH HOH . 
E 4 HOH A 66 666 38 HOH HOH . 
E 4 HOH A 67 667 55 HOH HOH . 
E 4 HOH A 68 668 43 HOH HOH . 
E 4 HOH A 69 669 49 HOH HOH . 
E 4 HOH A 70 670 7 HOH HOH . 
E 4 HOH A 71 671 30 HOH HOH . 
E 4 HOH A 72 672 66 HOH HOH . 
E 4 HOH A 73 673 41 HOH HOH . 
E 4 HOH A 74 674 81 HOH HOH . 
E 4 HOH A 75 675 86 HOH HOH . 
E 4 HOH A 76 676 85 HOH HOH . 
E 4 HOH A 77 677 73 HOH HOH . 
E 4 HOH A 78 678 50 HOH HOH . 
E 4 HOH A 79 679 63 HOH HOH . 
E 4 HOH A 80 680 78 HOH HOH . 
E 4 HOH A 81 681 62 HOH HOH . 
E 4 HOH A 82 682 61 HOH HOH . 
E 4 HOH A 83 683 83 HOH HOH . 
E 4 HOH A 84 684 82 HOH HOH . 
E 4 HOH A 85 685 87 HOH HOH . 
E 4 HOH A 86 686 59 HOH HOH . 
E 4 HOH A 87 687 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 10.768 31.759 43.963 1 47.84 ? C1 GOL 502 A 1 
HETATM 2 O O1 GOL . . . C 3 11.991 31.123 44.269 1 46.84 ? O1 GOL 502 A 1 
HETATM 3 C C2 GOL . . . C 3 9.841 32.302 45.011 1 44.35 ? C2 GOL 502 A 1 
HETATM 4 O O2 GOL . . . C 3 10.316 33.04 46.125 1 47 ? O2 GOL 502 A 1 
HETATM 5 C C3 GOL . . . C 3 8.715 33.154 44.431 1 38.9 ? C3 GOL 502 A 1 
HETATM 6 O O3 GOL . . . C 3 8.754 33.844 43.194 1 31.97 ? O3 GOL 502 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#