data_4ZXS # _model_server_result.job_id lb0a8ClhIz7EiwVwx_YRHA _model_server_result.datetime_utc '2024-10-28 02:27:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zxs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":401}' # _entry.id 4ZXS # _exptl.entry_id 4ZXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ZXS _cell.length_a 110.529 _cell.length_b 110.529 _cell.length_c 155.85 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 6' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 PISA 24-meric 24 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 3 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_645 -y+1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 165.7935 -95.720922 0 3 'crystal symmetry operation' 3_765 -x+y+2,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 165.7935 95.720922 0 4 'crystal symmetry operation' 4_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 221.058 0 0 5 'crystal symmetry operation' 5_665 y+1,-x+y+1,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 55.2645 95.720922 0 6 'crystal symmetry operation' 6_545 x-y,x-1,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 55.2645 -95.720922 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 232 B CYS 278 1_555 D SG CYS 232 D CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc1 A NE2 HIS 53 A HIS 55 1_555 E NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc2 A NE2 HIS 55 A HIS 57 1_555 E NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc3 B O VAL 56 B VAL 102 1_555 I NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.177 ? metalc ? metalc4 B O ALA 57 B ALA 103 1_555 I NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.163 ? metalc ? metalc5 B SG CYS 60 B CYS 106 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc6 B SG CYS 76 B CYS 122 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc7 B SG CYS 79 B CYS 125 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc8 B NE2 HIS 179 B HIS 225 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc9 B O TYR 182 B TYR 228 1_555 I NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.172 ? metalc ? metalc10 I NA NA . B NA 402 1_555 O O HOH . B HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.174 ? metalc ? metalc11 C NE2 HIS 53 C HIS 55 1_555 J NI NI . C NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc12 C NE2 HIS 55 C HIS 57 1_555 J NI NI . C NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc13 J NI NI . C NI 201 1_555 P O HOH . C HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc14 D SG CYS 60 D CYS 106 1_555 L ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc15 D SG CYS 76 D CYS 122 1_555 L ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc16 D SG CYS 79 D CYS 125 1_555 L ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc17 D O PHE 173 D PHE 219 1_555 M NA NA . D NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc18 D O GLY 175 D GLY 221 1_555 M NA NA . D NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc19 D NE2 HIS 179 D HIS 225 1_555 L ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZXS _atom_sites.fract_transf_matrix[1][1] 0.009047 _atom_sites.fract_transf_matrix[1][2] 0.005224 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010447 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NI A 1 201 2 NI NI . F 4 CL A 1 202 3 CL CL . G 4 CL A 1 203 4 CL CL . H 5 ZN B 1 401 1 ZN ZN . I 6 NA B 1 402 5 NA NA . J 3 NI C 1 201 7 NI NI . K 4 CL C 1 202 9 CL CL . L 5 ZN D 1 401 6 ZN ZN . M 6 NA D 1 402 8 NA NA . N 7 HOH A 1 301 7 HOH HOH . N 7 HOH A 2 302 41 HOH HOH . N 7 HOH A 3 303 24 HOH HOH . N 7 HOH A 4 304 17 HOH HOH . N 7 HOH A 5 305 8 HOH HOH . N 7 HOH A 6 306 18 HOH HOH . N 7 HOH A 7 307 1 HOH HOH . N 7 HOH A 8 308 19 HOH HOH . N 7 HOH A 9 309 30 HOH HOH . N 7 HOH A 10 310 28 HOH HOH . N 7 HOH A 11 311 26 HOH HOH . N 7 HOH A 12 312 20 HOH HOH . O 7 HOH B 1 501 12 HOH HOH . O 7 HOH B 2 502 4 HOH HOH . O 7 HOH B 3 503 14 HOH HOH . O 7 HOH B 4 504 40 HOH HOH . O 7 HOH B 5 505 35 HOH HOH . O 7 HOH B 6 506 11 HOH HOH . O 7 HOH B 7 507 6 HOH HOH . O 7 HOH B 8 508 39 HOH HOH . O 7 HOH B 9 509 2 HOH HOH . O 7 HOH B 10 510 21 HOH HOH . O 7 HOH B 11 511 27 HOH HOH . O 7 HOH B 12 512 3 HOH HOH . O 7 HOH B 13 513 23 HOH HOH . O 7 HOH B 14 514 42 HOH HOH . O 7 HOH B 15 515 10 HOH HOH . O 7 HOH B 16 516 5 HOH HOH . O 7 HOH B 17 517 34 HOH HOH . O 7 HOH B 18 518 38 HOH HOH . O 7 HOH B 19 519 37 HOH HOH . O 7 HOH B 20 520 25 HOH HOH . O 7 HOH B 21 521 16 HOH HOH . O 7 HOH B 22 522 9 HOH HOH . O 7 HOH B 23 523 22 HOH HOH . O 7 HOH B 24 524 32 HOH HOH . O 7 HOH B 25 525 31 HOH HOH . O 7 HOH B 26 526 15 HOH HOH . O 7 HOH B 27 527 29 HOH HOH . O 7 HOH B 28 528 33 HOH HOH . O 7 HOH B 29 529 36 HOH HOH . O 7 HOH B 30 530 13 HOH HOH . P 7 HOH C 1 301 58 HOH HOH . P 7 HOH C 2 302 49 HOH HOH . P 7 HOH C 3 303 43 HOH HOH . P 7 HOH C 4 304 45 HOH HOH . P 7 HOH C 5 305 65 HOH HOH . P 7 HOH C 6 306 60 HOH HOH . P 7 HOH C 7 307 64 HOH HOH . P 7 HOH C 8 308 62 HOH HOH . P 7 HOH C 9 309 47 HOH HOH . P 7 HOH C 10 310 44 HOH HOH . P 7 HOH C 11 311 56 HOH HOH . P 7 HOH C 12 312 52 HOH HOH . P 7 HOH C 13 313 53 HOH HOH . Q 7 HOH D 1 501 50 HOH HOH . Q 7 HOH D 2 502 55 HOH HOH . Q 7 HOH D 3 503 71 HOH HOH . Q 7 HOH D 4 504 67 HOH HOH . Q 7 HOH D 5 505 74 HOH HOH . Q 7 HOH D 6 506 69 HOH HOH . Q 7 HOH D 7 507 48 HOH HOH . Q 7 HOH D 8 508 73 HOH HOH . Q 7 HOH D 9 509 66 HOH HOH . Q 7 HOH D 10 510 63 HOH HOH . Q 7 HOH D 11 511 70 HOH HOH . Q 7 HOH D 12 512 51 HOH HOH . Q 7 HOH D 13 513 59 HOH HOH . Q 7 HOH D 14 514 57 HOH HOH . Q 7 HOH D 15 515 61 HOH HOH . Q 7 HOH D 16 516 54 HOH HOH . Q 7 HOH D 17 517 72 HOH HOH . Q 7 HOH D 18 518 46 HOH HOH . Q 7 HOH D 19 519 68 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 74.081 _atom_site.Cartn_y -32.678 _atom_site.Cartn_z 41.649 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #