data_4ZZB # _model_server_result.job_id -b1-G43fYxVYc9_KNtqmgw _model_server_result.datetime_utc '2024-11-04 22:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"OA","auth_seq_id":404}' # _entry.id 4ZZB # _exptl.entry_id 4ZZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.293 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description XENON _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.33 _cell.angle_gamma 90 _cell.entry_id 4ZZB _cell.length_a 176.966 _cell.length_b 130.528 _cell.length_c 157.526 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 N N N ? 6 O N N ? 6 S N N ? 6 T N N ? 6 U N N ? 6 V N N ? 6 AA N N ? 6 BA N N ? 6 CA N N ? 6 DA N N ? 6 HA N N ? 6 IA N N ? 6 JA N N ? 6 KA N N ? 6 OA N N ? 6 PA N N ? 6 QA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 A CYS 33 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 B SG CYS 33 B CYS 33 1_555 B SG CYS 246 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 C SG CYS 33 C CYS 33 1_555 C SG CYS 246 C CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf4 D SG CYS 33 D CYS 33 1_555 D SG CYS 246 D CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 E SG CYS 33 E CYS 33 1_555 E SG CYS 246 E CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A O ILE 71 A ILE 71 1_555 H NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc2 B O ILE 71 B ILE 71 1_555 Q NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc3 C O PRO 68 C PRO 68 1_555 Y NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.92 ? metalc ? metalc4 C O ILE 71 C ILE 71 1_555 Y NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc5 D O ILE 71 D ILE 71 1_555 FA NA NA . D NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.017 ? metalc ? metalc6 E O PRO 68 E PRO 68 1_555 MA NA NA . E NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? metalc ? metalc7 E O ILE 71 E ILE 71 1_555 MA NA NA . E NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? # _chem_comp.formula Xe _chem_comp.formula_weight 131.293 _chem_comp.id XE _chem_comp.mon_nstd_flag . _chem_comp.name XENON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ZZB _atom_sites.fract_transf_matrix[1][1] 0.005651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00103 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LMT A 1 401 318 LMT LMT . G 3 CL A 1 402 3 CL CL . H 4 NA A 1 403 9 NA NA . I 5 ACT A 1 404 1 ACT ACT . J 6 XE A 1 405 1 XE XE . K 6 XE A 1 406 2 XE XE . L 6 XE A 1 407 6 XE XE . M 6 XE A 1 408 8 XE XE . N 6 XE A 1 409 15 XE XE . O 6 XE A 1 410 18 XE XE . P 3 CL B 1 401 4 CL CL . Q 4 NA B 1 402 10 NA NA . R 5 ACT B 1 403 4 ACT ACT . S 6 XE B 1 404 3 XE XE . T 6 XE B 1 405 9 XE XE . U 6 XE B 1 406 16 XE XE . V 6 XE B 1 407 19 XE XE . W 5 ACT C 1 401 1 ACT ACT . X 3 CL C 1 402 5 CL CL . Y 4 NA C 1 403 11 NA NA . Z 5 ACT C 1 404 5 ACT ACT . AA 6 XE C 1 405 4 XE XE . BA 6 XE C 1 406 10 XE XE . CA 6 XE C 1 407 12 XE XE . DA 6 XE C 1 408 20 XE XE . EA 3 CL D 1 401 1 CL CL . FA 4 NA D 1 402 12 NA NA . GA 5 ACT D 1 403 2 ACT ACT . HA 6 XE D 1 404 5 XE XE . IA 6 XE D 1 405 11 XE XE . JA 6 XE D 1 406 13 XE XE . KA 6 XE D 1 407 21 XE XE . LA 3 CL E 1 401 2 CL CL . MA 4 NA E 1 402 13 NA NA . NA 5 ACT E 1 403 3 ACT ACT . OA 6 XE E 1 404 7 XE XE . PA 6 XE E 1 405 14 XE XE . QA 6 XE E 1 406 17 XE XE . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol XE _atom_site.label_atom_id XE _atom_site.label_comp_id XE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id OA _atom_site.label_entity_id 6 _atom_site.Cartn_x 67.119 _atom_site.Cartn_y -11.792 _atom_site.Cartn_z 37.193 _atom_site.occupancy 0.7 _atom_site.B_iso_or_equiv 161.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id XE _atom_site.auth_comp_id XE _atom_site.auth_seq_id 404 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #