data_4ZZH # _model_server_result.job_id Y0pTIiO8GvyrRCHzRJQoqA _model_server_result.datetime_utc '2024-11-27 04:06:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 4ZZH # _exptl.entry_id 4ZZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 491.465 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-N-[3-(1,3-oxazol-5-yl)phenyl]-7-[3-(trifluoromethyl)phenyl]-3,4-dihydro-1,4-methanopyrido[2,3-b][1,4]diazepine-5(2H)-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZZH _cell.length_a 99.19 _cell.length_b 111.64 _cell.length_c 132.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 -x+1/2,y,-z -1 0 0 0 1 0 0 0 -1 49.595 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 189 A CYS 371 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A SG CYS 192 A CYS 374 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc3 A SG CYS 213 A CYS 395 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc4 A SG CYS 216 A CYS 398 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? # _chem_comp.formula 'C26 H20 F3 N5 O2' _chem_comp.formula_weight 491.465 _chem_comp.id 4TO _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-N-[3-(1,3-oxazol-5-yl)phenyl]-7-[3-(trifluoromethyl)phenyl]-3,4-dihydro-1,4-methanopyrido[2,3-b][1,4]diazepine-5(2H)-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA NAB 4TO doub 1 n y CAA OAE 4TO sing 2 n y NAB CAC 4TO sing 3 n y OAE CAD 4TO sing 4 n y CAC CAD 4TO doub 5 n y CAD CAF 4TO sing 6 n n CAK CAF 4TO doub 7 n y CAK CAJ 4TO sing 8 n y CAF CAG 4TO sing 9 n y CAJ CAI 4TO doub 10 n y CAG CAH 4TO doub 11 n y CAI CAH 4TO sing 12 n y CBC CBD 4TO doub 13 n y CBC CBB 4TO sing 14 n y FBH CBG 4TO sing 15 n n CAH NAL 4TO sing 16 n n CBD CBE 4TO sing 17 n y CBB CBA 4TO doub 18 n y FBJ CBG 4TO sing 19 n n NAL CAM 4TO sing 20 n n CBE CBG 4TO sing 21 n n CBE CBF 4TO doub 22 n y CBG FBI 4TO sing 23 n n CBA CBF 4TO sing 24 n y CBA CAX 4TO sing 25 n n CAM OAN 4TO doub 26 n n CAM NAO 4TO sing 27 n n NAW CAX 4TO doub 28 n y NAW CAP 4TO sing 29 n y CAX CAY 4TO sing 30 n y NAO CAP 4TO sing 31 n n NAO CAU 4TO sing 32 n n CAP CAQ 4TO doub 33 n y CAV CAU 4TO sing 34 n n CAV NAR 4TO sing 35 n n CAY CAZ 4TO doub 36 n y CAU CAT 4TO sing 37 n n CAQ CAZ 4TO sing 38 n y CAQ NAR 4TO sing 39 n n NAR CAS 4TO sing 40 n n CAT CAS 4TO sing 41 n n CBF H1 4TO sing 42 n n CBD H2 4TO sing 43 n n CBC H3 4TO sing 44 n n CBB H4 4TO sing 45 n n CAY H5 4TO sing 46 n n CAZ H6 4TO sing 47 n n CAV H7 4TO sing 48 n n CAV H8 4TO sing 49 n n CAS H9 4TO sing 50 n n CAS H10 4TO sing 51 n n CAT H11 4TO sing 52 n n CAT H12 4TO sing 53 n n CAU H13 4TO sing 54 n n NAL H14 4TO sing 55 n n CAG H15 4TO sing 56 n n CAI H16 4TO sing 57 n n CAJ H17 4TO sing 58 n n CAK H18 4TO sing 59 n n CAA H19 4TO sing 60 n n CAC H20 4TO sing 61 n n # _atom_sites.entry_id 4ZZH _atom_sites.fract_transf_matrix[1][1] 0.010082 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008957 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007546 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 701 1 ZN ZN . C 3 4TO A 1 702 1 4TO DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FBH 4TO . . . C 3 25.185 -59.766 1.547 1 91.65 ? FBH 4TO 702 A 1 HETATM 2 C CBG 4TO . . . C 3 25.3 -58.647 2.302 1 90.94 ? CBG 4TO 702 A 1 HETATM 3 F FBI 4TO . . . C 3 25.051 -58.947 3.524 1 94.84 ? FBI 4TO 702 A 1 HETATM 4 F FBJ 4TO . . . C 3 24.424 -57.781 1.94 1 91.85 ? FBJ 4TO 702 A 1 HETATM 5 C CBE 4TO . . . C 3 26.597 -58.13 2.17 1 84.36 ? CBE 4TO 702 A 1 HETATM 6 C CBF 4TO . . . C 3 26.901 -56.833 2.577 1 83.86 ? CBF 4TO 702 A 1 HETATM 7 C CBD 4TO . . . C 3 27.598 -58.925 1.631 1 80.05 ? CBD 4TO 702 A 1 HETATM 8 C CBC 4TO . . . C 3 28.887 -58.43 1.5 1 80.16 ? CBC 4TO 702 A 1 HETATM 9 C CBB 4TO . . . C 3 29.19 -57.136 1.909 1 80.53 ? CBB 4TO 702 A 1 HETATM 10 C CBA 4TO . . . C 3 28.195 -56.325 2.449 1 85.26 ? CBA 4TO 702 A 1 HETATM 11 C CAX 4TO . . . C 3 28.495 -55.023 2.87 1 87.33 ? CAX 4TO 702 A 1 HETATM 12 C CAY 4TO . . . C 3 29.731 -54.768 3.447 1 87.71 ? CAY 4TO 702 A 1 HETATM 13 C CAZ 4TO . . . C 3 30.043 -53.494 3.886 1 85.2 ? CAZ 4TO 702 A 1 HETATM 14 N NAW 4TO . . . C 3 27.591 -54.032 2.743 1 84.28 ? NAW 4TO 702 A 1 HETATM 15 C CAP 4TO . . . C 3 27.871 -52.772 3.146 1 85.74 ? CAP 4TO 702 A 1 HETATM 16 C CAQ 4TO . . . C 3 29.105 -52.485 3.734 1 86.3 ? CAQ 4TO 702 A 1 HETATM 17 N NAR 4TO . . . C 3 29.359 -51.24 4.14 1 80.02 ? NAR 4TO 702 A 1 HETATM 18 C CAV 4TO . . . C 3 28.843 -50.167 3.303 1 70.31 ? CAV 4TO 702 A 1 HETATM 19 C CAS 4TO . . . C 3 28.77 -50.927 5.447 1 79.05 ? CAS 4TO 702 A 1 HETATM 20 C CAT 4TO . . . C 3 27.355 -50.468 5.08 1 72.24 ? CAT 4TO 702 A 1 HETATM 21 C CAU 4TO . . . C 3 27.373 -50.434 3.565 1 73.03 ? CAU 4TO 702 A 1 HETATM 22 N NAO 4TO . . . C 3 26.981 -51.764 3.034 1 80.19 ? NAO 4TO 702 A 1 HETATM 23 C CAM 4TO . . . C 3 25.737 -51.923 2.551 1 76.38 ? CAM 4TO 702 A 1 HETATM 24 O OAN 4TO . . . C 3 24.991 -50.954 2.562 1 75.75 ? OAN 4TO 702 A 1 HETATM 25 N NAL 4TO . . . C 3 25.368 -53.146 2.09 1 77.1 ? NAL 4TO 702 A 1 HETATM 26 C CAH 4TO . . . C 3 24.14 -53.434 1.582 1 78.9 ? CAH 4TO 702 A 1 HETATM 27 C CAG 4TO . . . C 3 23.137 -52.506 1.263 1 85.03 ? CAG 4TO 702 A 1 HETATM 28 C CAI 4TO . . . C 3 23.853 -54.775 1.36 1 76.08 ? CAI 4TO 702 A 1 HETATM 29 C CAJ 4TO . . . C 3 22.628 -55.175 0.848 1 76.45 ? CAJ 4TO 702 A 1 HETATM 30 C CAK 4TO . . . C 3 21.652 -54.242 0.542 1 78.76 ? CAK 4TO 702 A 1 HETATM 31 C CAF 4TO . . . C 3 21.897 -52.893 0.747 1 81.29 ? CAF 4TO 702 A 1 HETATM 32 C CAD 4TO . . . C 3 20.945 -52 0.437 1 77.56 ? CAD 4TO 702 A 1 HETATM 33 O OAE 4TO . . . C 3 19.714 -52.311 0.075 1 78.53 ? OAE 4TO 702 A 1 HETATM 34 C CAA 4TO . . . C 3 19.041 -51.148 -0.163 1 74.9 ? CAA 4TO 702 A 1 HETATM 35 N NAB 4TO . . . C 3 19.901 -50.164 0.06 1 75.11 ? NAB 4TO 702 A 1 HETATM 36 C CAC 4TO . . . C 3 21.075 -50.684 0.427 1 77.27 ? CAC 4TO 702 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #