data_4ZZJ # _model_server_result.job_id XNQuFPky2Zb8Dnyf4EuRRQ _model_server_result.datetime_utc '2024-11-23 12:05:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4zzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 4ZZJ # _exptl.entry_id 4ZZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 493.48 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S)-1,3-dimethyl-N-[3-(1,3-oxazol-5-yl)phenyl]-6-[3-(trifluoromethyl)phenyl]-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ZZJ _cell.length_a 94.51 _cell.length_b 94.51 _cell.length_c 356.84 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 94.51 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 3 B LYS 3 1_555 B N ALY 4 B ALY 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B C ALY 4 B ALY 4 1_555 B N LEU 5 B LEU 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C LEU 5 B LEU 5 1_555 B N NLE 6 B NLE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C NLE 6 B NLE 6 1_555 B N PHE 7 B PHE 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A SG CYS 189 A CYS 371 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A SG CYS 192 A CYS 374 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc3 A SG CYS 213 A CYS 395 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc4 A SG CYS 216 A CYS 398 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? # _chem_comp.formula 'C26 H22 F3 N5 O2' _chem_comp.formula_weight 493.48 _chem_comp.id 4TQ _chem_comp.mon_nstd_flag . _chem_comp.name (3S)-1,3-dimethyl-N-[3-(1,3-oxazol-5-yl)phenyl]-6-[3-(trifluoromethyl)phenyl]-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FBH CBG 4TQ sing 1 n n CBG FBI 4TQ sing 2 n n CBG FBJ 4TQ sing 3 n n CBG CBE 4TQ sing 4 n n CBE CBF 4TQ doub 5 n y CBE CBD 4TQ sing 6 n y CBF CBA 4TQ sing 7 n y CBD CBC 4TQ doub 8 n y CBC CBB 4TQ sing 9 n y CBB CBA 4TQ doub 10 n y CBA CAX 4TQ sing 11 n n CAX CAY 4TQ doub 12 n y CAX NAW 4TQ sing 13 n y CAY CAZ 4TQ sing 14 n y CAZ CAQ 4TQ doub 15 n y NAW CAP 4TQ doub 16 n y CAP CAQ 4TQ sing 17 n y CAP NAO 4TQ sing 18 n n CAQ NAR 4TQ sing 19 n n NAR CAV 4TQ sing 20 n n NAR CAS 4TQ sing 21 n n CAV CAU 4TQ sing 22 n n CAU NAO 4TQ sing 23 n n NAO CAM 4TQ sing 24 n n CAM OAN 4TQ doub 25 n n CAM NAL 4TQ sing 26 n n NAL CAH 4TQ sing 27 n n CAH CAG 4TQ doub 28 n y CAH CAI 4TQ sing 29 n y CAG CAF 4TQ sing 30 n y CAI CAJ 4TQ doub 31 n y CAJ CAK 4TQ sing 32 n y CAK CAF 4TQ doub 33 n y CAF CAD 4TQ sing 34 n n CAD OAE 4TQ sing 35 n y CAD CAC 4TQ doub 36 n y OAE CAA 4TQ sing 37 n y CAA NAB 4TQ doub 38 n y NAB CAC 4TQ sing 39 n y CAU CAT 4TQ sing 40 n n CBF H1 4TQ sing 41 n n CBD H2 4TQ sing 42 n n CBC H3 4TQ sing 43 n n CBB H4 4TQ sing 44 n n CAY H5 4TQ sing 45 n n CAZ H6 4TQ sing 46 n n CAV H7 4TQ sing 47 n n CAV H8 4TQ sing 48 n n CAS H9 4TQ sing 49 n n CAS H10 4TQ sing 50 n n CAS H11 4TQ sing 51 n n CAT H12 4TQ sing 52 n n CAT H13 4TQ sing 53 n n CAT H14 4TQ sing 54 n n CAU H15 4TQ sing 55 n n NAL H16 4TQ sing 56 n n CAG H17 4TQ sing 57 n n CAI H18 4TQ sing 58 n n CAJ H19 4TQ sing 59 n n CAK H20 4TQ sing 60 n n CAA H21 4TQ sing 61 n n CAC H22 4TQ sing 62 n n # _atom_sites.entry_id 4ZZJ _atom_sites.fract_transf_matrix[1][1] 0.010581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 701 1 ZN ZN . D 4 CNA A 1 702 1 CNA CNA . E 5 4TQ A 1 703 1 4TQ DRG . F 6 GOL A 1 704 1 GOL GOL . G 6 GOL A 1 705 2 GOL GOL . H 7 HOH A 1 801 42 HOH HOH . H 7 HOH A 2 802 39 HOH HOH . H 7 HOH A 3 803 3 HOH HOH . H 7 HOH A 4 804 10 HOH HOH . H 7 HOH A 5 805 26 HOH HOH . H 7 HOH A 6 806 31 HOH HOH . H 7 HOH A 7 807 17 HOH HOH . H 7 HOH A 8 808 30 HOH HOH . H 7 HOH A 9 809 38 HOH HOH . H 7 HOH A 10 810 41 HOH HOH . H 7 HOH A 11 811 23 HOH HOH . H 7 HOH A 12 812 27 HOH HOH . H 7 HOH A 13 813 43 HOH HOH . H 7 HOH A 14 814 22 HOH HOH . H 7 HOH A 15 815 25 HOH HOH . H 7 HOH A 16 816 5 HOH HOH . H 7 HOH A 17 817 32 HOH HOH . H 7 HOH A 18 818 35 HOH HOH . H 7 HOH A 19 819 12 HOH HOH . H 7 HOH A 20 820 24 HOH HOH . H 7 HOH A 21 821 4 HOH HOH . H 7 HOH A 22 822 1 HOH HOH . H 7 HOH A 23 823 11 HOH HOH . H 7 HOH A 24 824 33 HOH HOH . H 7 HOH A 25 825 37 HOH HOH . H 7 HOH A 26 826 34 HOH HOH . H 7 HOH A 27 827 44 HOH HOH . H 7 HOH A 28 828 36 HOH HOH . H 7 HOH A 29 829 15 HOH HOH . H 7 HOH A 30 830 14 HOH HOH . H 7 HOH A 31 831 7 HOH HOH . H 7 HOH A 32 832 21 HOH HOH . H 7 HOH A 33 833 28 HOH HOH . H 7 HOH A 34 834 13 HOH HOH . H 7 HOH A 35 835 2 HOH HOH . H 7 HOH A 36 836 16 HOH HOH . H 7 HOH A 37 837 6 HOH HOH . H 7 HOH A 38 838 20 HOH HOH . H 7 HOH A 39 839 19 HOH HOH . H 7 HOH A 40 840 40 HOH HOH . H 7 HOH A 41 841 29 HOH HOH . I 7 HOH B 1 101 18 HOH HOH . I 7 HOH B 2 102 9 HOH HOH . I 7 HOH B 3 103 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FBH 4TQ . . . E 5 -1.241 44.025 -5.752 1 88.53 ? FBH 4TQ 703 A 1 HETATM 2 C CBG 4TQ . . . E 5 -0.55 44.879 -5.025 1 77.67 ? CBG 4TQ 703 A 1 HETATM 3 F FBI 4TQ . . . E 5 -1.348 45.406 -4.15 1 73.61 ? FBI 4TQ 703 A 1 HETATM 4 F FBJ 4TQ . . . E 5 -0.079 45.835 -5.791 1 88.19 ? FBJ 4TQ 703 A 1 HETATM 5 C CBE 4TQ . . . E 5 0.514 44.213 -4.408 1 68.01 ? CBE 4TQ 703 A 1 HETATM 6 C CBF 4TQ . . . E 5 0.408 43.746 -3.099 1 74.25 ? CBF 4TQ 703 A 1 HETATM 7 C CBD 4TQ . . . E 5 1.698 44.014 -5.11 1 61.51 ? CBD 4TQ 703 A 1 HETATM 8 C CBC 4TQ . . . E 5 2.764 43.352 -4.507 1 66.35 ? CBC 4TQ 703 A 1 HETATM 9 C CBB 4TQ . . . E 5 2.654 42.885 -3.2 1 68.97 ? CBB 4TQ 703 A 1 HETATM 10 C CBA 4TQ . . . E 5 1.473 43.083 -2.492 1 71.41 ? CBA 4TQ 703 A 1 HETATM 11 C CAX 4TQ . . . E 5 1.37 42.606 -1.186 1 67.27 ? CAX 4TQ 703 A 1 HETATM 12 C CAY 4TQ . . . E 5 2.036 41.422 -0.871 1 61.89 ? CAY 4TQ 703 A 1 HETATM 13 C CAZ 4TQ . . . E 5 1.956 40.901 0.411 1 62.14 ? CAZ 4TQ 703 A 1 HETATM 14 N NAW 4TQ . . . E 5 0.632 43.255 -0.259 1 66.15 ? NAW 4TQ 703 A 1 HETATM 15 C CAP 4TQ . . . E 5 0.537 42.78 0.996 1 64.58 ? CAP 4TQ 703 A 1 HETATM 16 C CAQ 4TQ . . . E 5 1.201 41.609 1.334 1 64.16 ? CAQ 4TQ 703 A 1 HETATM 17 N NAR 4TQ . . . E 5 1.009 41.254 2.586 1 58.58 ? NAR 4TQ 703 A 1 HETATM 18 C CAV 4TQ . . . E 5 1.188 42.199 3.639 1 52.91 ? CAV 4TQ 703 A 1 HETATM 19 C CAS 4TQ . . . E 5 0.031 40.352 3.104 1 58.92 ? CAS 4TQ 703 A 1 HETATM 20 C CAT 4TQ . . . E 5 -1.023 41.457 3.385 1 51.21 ? CAT 4TQ 703 A 1 HETATM 21 C CAU 4TQ . . . E 5 -0.194 42.762 3.352 1 49.15 ? CAU 4TQ 703 A 1 HETATM 22 N NAO 4TQ . . . E 5 -0.18 43.38 1.987 1 60.4 ? NAO 4TQ 703 A 1 HETATM 23 C CAM 4TQ . . . E 5 -0.862 44.527 1.8 1 62.01 ? CAM 4TQ 703 A 1 HETATM 24 O OAN 4TQ . . . E 5 -1.491 45.005 2.743 1 64.4 ? OAN 4TQ 703 A 1 HETATM 25 N NAL 4TQ . . . E 5 -0.809 45.084 0.564 1 64.13 ? NAL 4TQ 703 A 1 HETATM 26 C CAH 4TQ . . . E 5 -1.457 46.209 0.188 1 66.22 ? CAH 4TQ 703 A 1 HETATM 27 C CAG 4TQ . . . E 5 -2.076 47.127 1.05 1 59.32 ? CAG 4TQ 703 A 1 HETATM 28 C CAI 4TQ . . . E 5 -1.497 46.463 -1.188 1 58.32 ? CAI 4TQ 703 A 1 HETATM 29 C CAJ 4TQ . . . E 5 -2.136 47.589 -1.699 1 50.4 ? CAJ 4TQ 703 A 1 HETATM 30 C CAK 4TQ . . . E 5 -2.749 48.486 -0.835 1 60.73 ? CAK 4TQ 703 A 1 HETATM 31 C CAF 4TQ . . . E 5 -2.722 48.261 0.542 1 65.2 ? CAF 4TQ 703 A 1 HETATM 32 C CAD 4TQ . . . E 5 -3.318 49.14 1.352 1 68.82 ? CAD 4TQ 703 A 1 HETATM 33 O OAE 4TQ . . . E 5 -3.945 50.262 0.928 1 68.91 ? OAE 4TQ 703 A 1 HETATM 34 C CAA 4TQ . . . E 5 -4.419 50.883 2.067 1 61.83 ? CAA 4TQ 703 A 1 HETATM 35 N NAB 4TQ . . . E 5 -4.069 50.128 3.11 1 57.38 ? NAB 4TQ 703 A 1 HETATM 36 C CAC 4TQ . . . E 5 -3.394 49.058 2.677 1 63.83 ? CAC 4TQ 703 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #