data_5A00 # _model_server_result.job_id 3Hb-bKqRyeXqoyU59L_0kw _model_server_result.datetime_utc '2024-11-25 12:54:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5a00 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2012}' # _entry.id 5A00 # _exptl.entry_id 5A00 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 395.419 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[1-(4,4-Difluorocyclohexyl)-piperidin-4-yl]-6-fluoro-3-oxo-2,3-dihydro-1H-isoindole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5A00 _cell.length_a 49.083 _cell.length_b 89.392 _cell.length_c 193.187 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5A00 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H24 F3 N3 O2' _chem_comp.formula_weight 395.419 _chem_comp.id D7N _chem_comp.mon_nstd_flag . _chem_comp.name 2-[1-(4,4-Difluorocyclohexyl)-piperidin-4-yl]-6-fluoro-3-oxo-2,3-dihydro-1H-isoindole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C24 D7N sing 83 n n C25 C20 D7N sing 84 n n C24 C23 D7N sing 85 n n C23 F26 D7N sing 86 n n C23 F27 D7N sing 87 n n C23 C22 D7N sing 88 n n C22 C21 D7N sing 89 n n C21 C20 D7N sing 90 n n C20 N16 D7N sing 91 n n N16 C15 D7N sing 92 n n N16 C17 D7N sing 93 n n C15 C14 D7N sing 94 n n C14 C13 D7N sing 95 n n C17 C18 D7N sing 96 n n C18 C13 D7N sing 97 n n C13 N10 D7N sing 98 n n N10 C9 D7N sing 99 n n N10 C11 D7N sing 100 n n C9 C8 D7N sing 101 n n C11 O12 D7N doub 102 n n C11 C7 D7N sing 103 n n C7 C8 D7N doub 104 n y C7 C4 D7N sing 105 n y C8 C3 D7N sing 106 n y C3 C2 D7N doub 107 n y C2 F5 D7N sing 108 n n C2 C1 D7N sing 109 n y C1 C4 D7N doub 110 n y C4 C6 D7N sing 111 n n C6 O28 D7N doub 112 n n C6 N19 D7N sing 113 n n C25 H251 D7N sing 114 n n C25 H252 D7N sing 115 n n C24 H241 D7N sing 116 n n C24 H242 D7N sing 117 n n C20 H20 D7N sing 118 n n C22 H221 D7N sing 119 n n C22 H222 D7N sing 120 n n C21 H211 D7N sing 121 n n C21 H212 D7N sing 122 n n C15 H151 D7N sing 123 n n C15 H152 D7N sing 124 n n C17 H171 D7N sing 125 n n C17 H172 D7N sing 126 n n C14 H141 D7N sing 127 n n C14 H142 D7N sing 128 n n C13 H13 D7N sing 129 n n C18 H181 D7N sing 130 n n C18 H182 D7N sing 131 n n C9 H91 D7N sing 132 n n C9 H92 D7N sing 133 n n C3 H3 D7N sing 134 n n C1 H1 D7N sing 135 n n N19 H191 D7N sing 136 n n N19 H192 D7N sing 137 n n # _atom_sites.entry_id 5A00 _atom_sites.fract_transf_matrix[1][1] 0.020374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D7N A 1 2012 2012 D7N D7N . C 3 SO4 A 1 2013 2013 SO4 SO4 . D 3 SO4 A 1 2014 2014 SO4 SO4 . E 4 HOH A 1 3001 3001 HOH HOH . E 4 HOH A 2 3002 3002 HOH HOH . E 4 HOH A 3 3003 3003 HOH HOH . E 4 HOH A 4 3004 3004 HOH HOH . E 4 HOH A 5 3005 3005 HOH HOH . E 4 HOH A 6 3006 3006 HOH HOH . E 4 HOH A 7 3007 3007 HOH HOH . E 4 HOH A 8 3008 3008 HOH HOH . E 4 HOH A 9 3009 3009 HOH HOH . E 4 HOH A 10 3010 3010 HOH HOH . E 4 HOH A 11 3011 3011 HOH HOH . E 4 HOH A 12 3012 3012 HOH HOH . E 4 HOH A 13 3013 3013 HOH HOH . E 4 HOH A 14 3014 3014 HOH HOH . E 4 HOH A 15 3015 3015 HOH HOH . E 4 HOH A 16 3016 3016 HOH HOH . E 4 HOH A 17 3017 3017 HOH HOH . E 4 HOH A 18 3018 3018 HOH HOH . E 4 HOH A 19 3019 3019 HOH HOH . E 4 HOH A 20 3020 3020 HOH HOH . E 4 HOH A 21 3021 3021 HOH HOH . E 4 HOH A 22 3022 3022 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C25 D7N . . . B 2 20.185 11.334 75.863 1 79.84 ? C25 D7N 2012 A 1 HETATM 2 C C24 D7N . . . B 2 19.397 10.037 76.126 1 80.46 ? C24 D7N 2012 A 1 HETATM 3 C C23 D7N . . . B 2 17.916 10.222 75.738 1 80.12 ? C23 D7N 2012 A 1 HETATM 4 F F26 D7N . . . B 2 17.244 9.197 76.18 1 80.22 ? F26 D7N 2012 A 1 HETATM 5 F F27 D7N . . . B 2 17.845 10.363 74.355 1 79.76 ? F27 D7N 2012 A 1 HETATM 6 C C22 D7N . . . B 2 17.284 11.447 76.421 1 78.78 ? C22 D7N 2012 A 1 HETATM 7 C C21 D7N . . . B 2 18.079 12.696 76.077 1 77.63 ? C21 D7N 2012 A 1 HETATM 8 C C20 D7N . . . B 2 19.501 12.49 76.614 1 78.13 ? C20 D7N 2012 A 1 HETATM 9 N N16 D7N . . . B 2 20.304 13.722 76.647 1 77.16 ? N16 D7N 2012 A 1 HETATM 10 C C15 D7N . . . B 2 20.843 14.188 75.36 1 75.09 ? C15 D7N 2012 A 1 HETATM 11 C C14 D7N . . . B 2 21.9 15.244 75.641 1 75.02 ? C14 D7N 2012 A 1 HETATM 12 C C17 D7N . . . B 2 19.557 14.809 77.296 1 78.77 ? C17 D7N 2012 A 1 HETATM 13 C C18 D7N . . . B 2 20.494 15.933 77.681 1 76.59 ? C18 D7N 2012 A 1 HETATM 14 C C13 D7N . . . B 2 21.31 16.41 76.471 1 75.28 ? C13 D7N 2012 A 1 HETATM 15 N N10 D7N . . . B 2 22.385 17.333 76.929 1 78.04 ? N10 D7N 2012 A 1 HETATM 16 C C9 D7N . . . B 2 23.181 17.247 78.155 1 72.43 ? C9 D7N 2012 A 1 HETATM 17 C C11 D7N . . . B 2 22.83 18.399 76.277 1 76.29 ? C11 D7N 2012 A 1 HETATM 18 O O12 D7N . . . B 2 22.338 18.764 75.211 1 77.07 ? O12 D7N 2012 A 1 HETATM 19 C C7 D7N . . . B 2 23.786 19.06 76.952 1 72.47 ? C7 D7N 2012 A 1 HETATM 20 C C8 D7N . . . B 2 23.998 18.368 78.104 1 72.13 ? C8 D7N 2012 A 1 HETATM 21 C C3 D7N . . . B 2 24.883 18.77 79.016 1 72.12 ? C3 D7N 2012 A 1 HETATM 22 C C2 D7N . . . B 2 25.622 19.919 78.798 1 70.37 ? C2 D7N 2012 A 1 HETATM 23 F F5 D7N . . . B 2 26.466 20.311 79.644 1 68.77 ? F5 D7N 2012 A 1 HETATM 24 C C1 D7N . . . B 2 25.42 20.637 77.632 1 70.1 ? C1 D7N 2012 A 1 HETATM 25 C C4 D7N . . . B 2 24.482 20.206 76.696 1 68.91 ? C4 D7N 2012 A 1 HETATM 26 C C6 D7N . . . B 2 24.377 21.019 75.545 1 66.07 ? C6 D7N 2012 A 1 HETATM 27 O O28 D7N . . . B 2 25.311 21.748 75.219 1 63.68 ? O28 D7N 2012 A 1 HETATM 28 N N19 D7N . . . B 2 23.252 20.988 74.843 1 62.72 ? N19 D7N 2012 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #