data_5A2S
#
_model_server_result.job_id            hOwqGX5U8Un2M_vz3i8uDw 
_model_server_result.datetime_utc      '2024-10-13 09:16:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5a2s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    5A2S 
#
_exptl.entry_id    5A2S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              367.349 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1S,2S,3S)-1-fluoranyl-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5A2S 
_cell.length_a            52.948 
_cell.length_b            82.141 
_cell.length_c            161.626 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5A2S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C O6 OTF . A OTF 1 1_555 D ZN ZN . A ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc2 C O8 OTF . A OTF 1 1_555 D ZN ZN . A ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc3 G O8 OTF . B OTF 1 1_555 H ZN ZN . B ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc4 G O6 OTF . B OTF 1 1_555 H ZN ZN . B ZN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
#
_chem_comp.formula           'C20 H15 F2 N3 O2' 
_chem_comp.formula_weight    367.349 
_chem_comp.id                OTF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1S,2S,3S)-1-fluoranyl-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OTF sing 237 n n 
C1 O6 OTF doub 238 n n 
C1 N7 OTF sing 239 n n 
C2 C3 OTF sing 240 n n 
C2 C4 OTF sing 241 n n 
C2 F5 OTF sing 242 n n 
C3 C4 OTF sing 243 n n 
C3 C15 OTF sing 244 n n 
C4 C9 OTF sing 245 n n 
N7 O8 OTF sing 246 n n 
C9 C10 OTF sing 247 n y 
C9 C14 OTF doub 248 n y 
C10 C11 OTF doub 249 n y 
C11 C12 OTF sing 250 n y 
C12 C13 OTF doub 251 n y 
C13 C14 OTF sing 252 n y 
C15 C16 OTF sing 253 n y 
C15 C20 OTF doub 254 n y 
C16 C17 OTF doub 255 n y 
C17 C18 OTF sing 256 n y 
C18 C19 OTF doub 257 n y 
C18 C21 OTF sing 258 n n 
C19 C20 OTF sing 259 n y 
C21 N22 OTF sing 260 n y 
C21 N26 OTF doub 261 n y 
N22 C23 OTF doub 262 n y 
C23 C24 OTF sing 263 n y 
C24 C25 OTF doub 264 n y 
C24 F27 OTF sing 265 n n 
C25 N26 OTF sing 266 n y 
N7 H7 OTF sing 267 n n 
C3 H3 OTF sing 268 n n 
C4 H4 OTF sing 269 n n 
O8 H8 OTF sing 270 n n 
C10 H10 OTF sing 271 n n 
C14 H14 OTF sing 272 n n 
C11 H11 OTF sing 273 n n 
C12 H12 OTF sing 274 n n 
C13 H13 OTF sing 275 n n 
C16 H16 OTF sing 276 n n 
C20 H20 OTF sing 277 n n 
C17 H17 OTF sing 278 n n 
C19 H19 OTF sing 279 n n 
C23 H23 OTF sing 280 n n 
C25 H25 OTF sing 281 n n 
#
_atom_sites.entry_id                     5A2S 
_atom_sites.fract_transf_matrix[1][1]    0.018886 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006187 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OTF A 1 1 1 OTF OTF . 
D 3 ZN A 1 2 2 ZN ZN . 
E 3 ZN A 1 3 3 ZN ZN . 
F 4 NA A 1 4 4 NA NA . 
G 2 OTF B 1 1 1 OTF OTF . 
H 3 ZN B 1 2 2 ZN ZN . 
I 3 ZN B 1 3 3 ZN ZN . 
J 4 NA B 1 4 4 NA NA . 
K 5 HOH A 1 2001 2001 HOH HOH . 
K 5 HOH A 2 2002 2002 HOH HOH . 
K 5 HOH A 3 2003 2003 HOH HOH . 
K 5 HOH A 4 2004 2004 HOH HOH . 
K 5 HOH A 5 2005 2005 HOH HOH . 
K 5 HOH A 6 2006 2006 HOH HOH . 
K 5 HOH A 7 2007 2007 HOH HOH . 
K 5 HOH A 8 2008 2008 HOH HOH . 
K 5 HOH A 9 2009 2009 HOH HOH . 
K 5 HOH A 10 2010 2010 HOH HOH . 
K 5 HOH A 11 2011 2011 HOH HOH . 
K 5 HOH A 12 2012 2012 HOH HOH . 
K 5 HOH A 13 2013 2013 HOH HOH . 
K 5 HOH A 14 2014 2014 HOH HOH . 
K 5 HOH A 15 2015 2015 HOH HOH . 
K 5 HOH A 16 2016 2016 HOH HOH . 
K 5 HOH A 17 2017 2017 HOH HOH . 
K 5 HOH A 18 2018 2018 HOH HOH . 
K 5 HOH A 19 2019 2019 HOH HOH . 
K 5 HOH A 20 2020 2020 HOH HOH . 
K 5 HOH A 21 2021 2021 HOH HOH . 
K 5 HOH A 22 2022 2022 HOH HOH . 
K 5 HOH A 23 2023 2023 HOH HOH . 
K 5 HOH A 24 2024 2024 HOH HOH . 
K 5 HOH A 25 2025 2025 HOH HOH . 
K 5 HOH A 26 2026 2026 HOH HOH . 
K 5 HOH A 27 2027 2027 HOH HOH . 
K 5 HOH A 28 2028 2028 HOH HOH . 
K 5 HOH A 29 2029 2029 HOH HOH . 
K 5 HOH A 30 2030 2030 HOH HOH . 
K 5 HOH A 31 2031 2031 HOH HOH . 
K 5 HOH A 32 2032 2032 HOH HOH . 
K 5 HOH A 33 2033 2033 HOH HOH . 
K 5 HOH A 34 2034 2034 HOH HOH . 
K 5 HOH A 35 2035 2035 HOH HOH . 
K 5 HOH A 36 2036 2036 HOH HOH . 
K 5 HOH A 37 2037 2037 HOH HOH . 
K 5 HOH A 38 2038 2038 HOH HOH . 
K 5 HOH A 39 2039 2039 HOH HOH . 
K 5 HOH A 40 2040 2040 HOH HOH . 
K 5 HOH A 41 2041 2041 HOH HOH . 
K 5 HOH A 42 2042 2042 HOH HOH . 
K 5 HOH A 43 2043 2043 HOH HOH . 
L 5 HOH B 1 2001 2001 HOH HOH . 
L 5 HOH B 2 2002 2002 HOH HOH . 
L 5 HOH B 3 2003 2003 HOH HOH . 
L 5 HOH B 4 2004 2004 HOH HOH . 
L 5 HOH B 5 2005 2005 HOH HOH . 
L 5 HOH B 6 2006 2006 HOH HOH . 
L 5 HOH B 7 2007 2007 HOH HOH . 
L 5 HOH B 8 2008 2008 HOH HOH . 
L 5 HOH B 9 2009 2009 HOH HOH . 
L 5 HOH B 10 2010 2010 HOH HOH . 
L 5 HOH B 11 2011 2011 HOH HOH . 
L 5 HOH B 12 2012 2012 HOH HOH . 
L 5 HOH B 13 2013 2013 HOH HOH . 
L 5 HOH B 14 2014 2014 HOH HOH . 
L 5 HOH B 15 2015 2015 HOH HOH . 
L 5 HOH B 16 2016 2016 HOH HOH . 
L 5 HOH B 17 2017 2017 HOH HOH . 
L 5 HOH B 18 2018 2018 HOH HOH . 
L 5 HOH B 19 2019 2019 HOH HOH . 
L 5 HOH B 20 2020 2020 HOH HOH . 
L 5 HOH B 21 2021 2021 HOH HOH . 
L 5 HOH B 22 2022 2022 HOH HOH . 
L 5 HOH B 23 2023 2023 HOH HOH . 
L 5 HOH B 24 2024 2024 HOH HOH . 
L 5 HOH B 25 2025 2025 HOH HOH . 
L 5 HOH B 26 2026 2026 HOH HOH . 
L 5 HOH B 27 2027 2027 HOH HOH . 
L 5 HOH B 28 2028 2028 HOH HOH . 
L 5 HOH B 29 2029 2029 HOH HOH . 
L 5 HOH B 30 2030 2030 HOH HOH . 
L 5 HOH B 31 2031 2031 HOH HOH . 
L 5 HOH B 32 2032 2032 HOH HOH . 
L 5 HOH B 33 2033 2033 HOH HOH . 
L 5 HOH B 34 2034 2034 HOH HOH . 
L 5 HOH B 35 2035 2035 HOH HOH . 
L 5 HOH B 36 2036 2036 HOH HOH . 
L 5 HOH B 37 2037 2037 HOH HOH . 
L 5 HOH B 38 2038 2038 HOH HOH . 
L 5 HOH B 39 2039 2039 HOH HOH . 
L 5 HOH B 40 2040 2040 HOH HOH . 
L 5 HOH B 41 2041 2041 HOH HOH . 
L 5 HOH B 42 2042 2042 HOH HOH . 
L 5 HOH B 43 2043 2043 HOH HOH . 
L 5 HOH B 44 2044 2044 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OTF . . . C 2 -2.299 -15.809 -40.607 1 22.49 ? C1 OTF 1 A 1 
HETATM 2 C C2 OTF . . . C 2 -3.574 -15.299 -39.955 1 22.76 ? C2 OTF 1 A 1 
HETATM 3 C C3 OTF . . . C 2 -4.832 -15.031 -40.805 1 23.46 ? C3 OTF 1 A 1 
HETATM 4 C C4 OTF . . . C 2 -4.821 -16.14 -39.754 1 22.67 ? C4 OTF 1 A 1 
HETATM 5 F F5 OTF . . . C 2 -3.399 -14.519 -38.914 1 22.78 ? F5 OTF 1 A 1 
HETATM 6 O O6 OTF . . . C 2 -2.178 -16.28 -41.734 1 21.7 ? O6 OTF 1 A 1 
HETATM 7 N N7 OTF . . . C 2 -1.259 -15.586 -39.808 1 22.62 ? N7 OTF 1 A 1 
HETATM 8 O O8 OTF . . . C 2 0.056 -15.785 -40.216 1 22.1 ? O8 OTF 1 A 1 
HETATM 9 C C9 OTF . . . C 2 -4.959 -17.509 -40.276 1 22.43 ? C9 OTF 1 A 1 
HETATM 10 C C10 OTF . . . C 2 -6.041 -17.802 -41.095 1 22.41 ? C10 OTF 1 A 1 
HETATM 11 C C11 OTF . . . C 2 -6.218 -19.091 -41.573 1 22.61 ? C11 OTF 1 A 1 
HETATM 12 C C12 OTF . . . C 2 -5.328 -20.089 -41.196 1 22.9 ? C12 OTF 1 A 1 
HETATM 13 C C13 OTF . . . C 2 -4.256 -19.801 -40.356 1 22.25 ? C13 OTF 1 A 1 
HETATM 14 C C14 OTF . . . C 2 -4.08 -18.507 -39.886 1 22.22 ? C14 OTF 1 A 1 
HETATM 15 C C15 OTF . . . C 2 -5.439 -13.699 -40.491 1 25.13 ? C15 OTF 1 A 1 
HETATM 16 C C16 OTF . . . C 2 -6.252 -13.463 -39.381 1 26.3 ? C16 OTF 1 A 1 
HETATM 17 C C17 OTF . . . C 2 -6.779 -12.197 -39.13 1 26.83 ? C17 OTF 1 A 1 
HETATM 18 C C18 OTF . . . C 2 -6.511 -11.14 -39.989 1 27.33 ? C18 OTF 1 A 1 
HETATM 19 C C19 OTF . . . C 2 -5.694 -11.366 -41.092 1 26.77 ? C19 OTF 1 A 1 
HETATM 20 C C20 OTF . . . C 2 -5.17 -12.631 -41.336 1 26.18 ? C20 OTF 1 A 1 
HETATM 21 C C21 OTF . . . C 2 -7.059 -9.78 -39.722 1 28.4 ? C21 OTF 1 A 1 
HETATM 22 N N22 OTF . . . C 2 -7.092 -8.844 -40.711 1 29.24 ? N22 OTF 1 A 1 
HETATM 23 C C23 OTF . . . C 2 -7.564 -7.612 -40.467 1 29.67 ? C23 OTF 1 A 1 
HETATM 24 C C24 OTF . . . C 2 -8.013 -7.294 -39.185 1 30.52 ? C24 OTF 1 A 1 
HETATM 25 C C25 OTF . . . C 2 -7.955 -8.255 -38.178 1 30.05 ? C25 OTF 1 A 1 
HETATM 26 N N26 OTF . . . C 2 -7.48 -9.472 -38.467 1 29.7 ? N26 OTF 1 A 1 
HETATM 27 F F27 OTF . . . C 2 -8.49 -6.069 -38.912 1 32.65 ? F27 OTF 1 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           27 
#