data_5A43 # _model_server_result.job_id ZclyJYoxGx63EWRmuJmpSA _model_server_result.datetime_utc '2025-01-09 02:34:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5a43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1129}' # _entry.id 5A43 # _exptl.entry_id 5A43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5A43 _cell.length_a 87.42 _cell.length_b 87.42 _cell.length_c 146.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5A43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 50 A THR 50 1_555 A N MSE 51 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 51 A MSE 51 1_555 A N LEU 52 A LEU 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 A C LEU 67 A LEU 67 1_555 A N MSE 68 A MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 A C MSE 68 A MSE 68 1_555 A N ILE 69 A ILE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C ILE 112 A ILE 112 1_555 A N MSE 113 A MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C MSE 113 A MSE 113 1_555 A N THR 114 A THR 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C MSE 1 B MSE 1 1_555 B N ILE 2 B ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 B C THR 50 B THR 50 1_555 B N MSE 51 B MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 B C MSE 51 B MSE 51 1_555 B N LEU 52 B LEU 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale10 B C LEU 67 B LEU 67 1_555 B N MSE 68 B MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 B C MSE 68 B MSE 68 1_555 B N ILE 69 B ILE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale12 B C ILE 112 B ILE 112 1_555 B N MSE 113 B MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale13 B C MSE 113 B MSE 113 1_555 B N THR 114 B THR 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale14 C C THR 75 C THR 75 1_555 C N MSE 76 C MSE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale15 C C MSE 76 C MSE 76 1_555 C N TYR 77 C TYR 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 D C THR 75 D THR 75 1_555 D N MSE 76 D MSE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale17 D C MSE 76 D MSE 76 1_555 D N TYR 77 D TYR 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A O GLY 75 A GLY 75 1_555 G NA NA . B NA 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A O SER 78 A SER 78 1_555 G NA NA . B NA 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc3 B O GLY 75 B GLY 75 1_555 G NA NA . B NA 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc4 B O SER 78 B SER 78 1_555 G NA NA . B NA 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 5A43 _atom_sites.fract_transf_matrix[1][1] 0.011439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 F A 1 1126 1126 F F . F 4 DMU A 1 1127 1127 DMU DMU . G 5 NA B 1 1127 1127 NA NA . H 3 F B 1 1128 1128 F F . I 4 DMU B 1 1129 1129 DMU DMU . J 4 DMU C 1 1097 1097 DMU DMU . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . L 6 HOH B 1 2001 2001 HOH HOH . L 6 HOH B 2 2002 2002 HOH HOH . M 6 HOH C 1 2001 2001 HOH HOH . M 6 HOH C 2 2002 2002 HOH HOH . M 6 HOH C 3 2003 2003 HOH HOH . M 6 HOH C 4 2004 2004 HOH HOH . N 6 HOH D 1 2001 2001 HOH HOH . N 6 HOH D 2 2002 2002 HOH HOH . N 6 HOH D 3 2003 2003 HOH HOH . N 6 HOH D 4 2004 2004 HOH HOH . N 6 HOH D 5 2005 2005 HOH HOH . N 6 HOH D 6 2006 2006 HOH HOH . N 6 HOH D 7 2007 2007 HOH HOH . N 6 HOH D 8 2008 2008 HOH HOH . N 6 HOH D 9 2009 2009 HOH HOH . N 6 HOH D 10 2010 2010 HOH HOH . N 6 HOH D 11 2011 2011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . I 4 -37.08 -19.223 11.707 1 72.75 ? C1 DMU 1129 B 1 HETATM 2 C C2 DMU . . . I 4 -36.99 -20.615 11.11 1 68.77 ? C2 DMU 1129 B 1 HETATM 3 C C3 DMU . . . I 4 -37.957 -20.763 9.939 1 70.3 ? C3 DMU 1129 B 1 HETATM 4 C C4 DMU . . . I 4 -37.6 -19.679 8.926 1 68.45 ? C4 DMU 1129 B 1 HETATM 5 O O5 DMU . . . I 4 -37.741 -18.394 9.548 1 68.24 ? O5 DMU 1129 B 1 HETATM 6 C C6 DMU . . . I 4 -36.816 -18.194 10.618 1 68.01 ? C6 DMU 1129 B 1 HETATM 7 O O7 DMU . . . I 4 -37.707 -22.082 9.428 1 72.08 ? O7 DMU 1129 B 1 HETATM 8 O O16 DMU . . . I 4 -36.971 -16.859 11.121 1 71.3 ? O16 DMU 1129 B 1 HETATM 9 C C18 DMU . . . I 4 -36.662 -15.852 10.139 1 64.28 ? C18 DMU 1129 B 1 HETATM 10 C C19 DMU . . . I 4 -37.183 -14.477 10.466 1 65.88 ? C19 DMU 1129 B 1 HETATM 11 C C22 DMU . . . I 4 -36.151 -13.542 11.08 1 72.81 ? C22 DMU 1129 B 1 HETATM 12 C C25 DMU . . . I 4 -35.754 -12.372 10.196 1 66.17 ? C25 DMU 1129 B 1 HETATM 13 C C28 DMU . . . I 4 -35.244 -11.162 10.965 1 68.39 ? C28 DMU 1129 B 1 HETATM 14 C C31 DMU . . . I 4 -34.734 -10.025 10.092 1 70.13 ? C31 DMU 1129 B 1 HETATM 15 C C34 DMU . . . I 4 -35.761 -9.473 9.116 1 75.71 ? C34 DMU 1129 B 1 HETATM 16 C C37 DMU . . . I 4 -35.194 -8.516 8.079 1 70.38 ? C37 DMU 1129 B 1 HETATM 17 O O49 DMU . . . I 4 -36.134 -19.106 12.775 1 78.4 ? O49 DMU 1129 B 1 HETATM 18 O O55 DMU . . . I 4 -37.246 -21.605 12.11 1 80.94 ? O55 DMU 1129 B 1 HETATM 19 C C57 DMU . . . I 4 -38.424 -19.654 7.66 1 61.23 ? C57 DMU 1129 B 1 HETATM 20 O O61 DMU . . . I 4 -39.729 -19.112 7.867 1 63.76 ? O61 DMU 1129 B 1 HETATM 21 C C5 DMU . . . I 4 -38.323 -24.307 8.849 1 72.24 ? C5 DMU 1129 B 1 HETATM 22 C C7 DMU . . . I 4 -38.009 -24.36 7.367 1 66.88 ? C7 DMU 1129 B 1 HETATM 23 C C8 DMU . . . I 4 -39.325 -24.349 6.6 1 69.61 ? C8 DMU 1129 B 1 HETATM 24 C C9 DMU . . . I 4 -40.256 -23.315 7.239 1 75.64 ? C9 DMU 1129 B 1 HETATM 25 O O1 DMU . . . I 4 -39.488 -22.363 8 1 77.32 ? O1 DMU 1129 B 1 HETATM 26 C C10 DMU . . . I 4 -38.842 -22.909 9.159 1 71.33 ? C10 DMU 1129 B 1 HETATM 27 O O2 DMU . . . I 4 -39.144 -24.089 5.206 1 69.91 ? O2 DMU 1129 B 1 HETATM 28 O O3 DMU . . . I 4 -37.227 -24.639 9.71 1 71.64 ? O3 DMU 1129 B 1 HETATM 29 O O4 DMU . . . I 4 -37.195 -25.48 7.009 1 64.6 ? O4 DMU 1129 B 1 HETATM 30 C C11 DMU . . . I 4 -41.055 -22.531 6.223 1 63.82 ? C11 DMU 1129 B 1 HETATM 31 O O6 DMU . . . I 4 -42.016 -23.347 5.548 1 70.86 ? O6 DMU 1129 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 950 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #