data_5A6I # _model_server_result.job_id X_D193tZAN3B1gMjEtM_fg _model_server_result.datetime_utc '2024-11-27 09:17:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5a6i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1124}' # _entry.id 5A6I # _exptl.entry_id 5A6I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Tolcapone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5A6I _cell.length_a 42.484 _cell.length_b 62.547 _cell.length_c 84.684 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5A6I _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_567 x,-y+1,-z+2 1 0 0 0 -1 0 0 0 -1 0 62.547 169.368 3 'crystal symmetry operation' 3_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 0 0 169.368 4 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 62.547 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H11 N O5' _chem_comp.formula_weight 273.241 _chem_comp.id TCW _chem_comp.mon_nstd_flag . _chem_comp.name Tolcapone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (3,4-dihydroxy-5-nitrophenyl)(4-methylphenyl)methanone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C12 TCW doub 271 n n C12 C4 TCW sing 272 n n C12 C14 TCW sing 273 n n C4 C3 TCW doub 274 n y C4 C5 TCW sing 275 n y C3 C2 TCW sing 276 n y C2 O7 TCW sing 277 n n C2 C1 TCW doub 278 n y C5 C6 TCW doub 279 n y C6 N9 TCW sing 280 n n C6 C1 TCW sing 281 n y N9 O11 TCW sing 282 n n N9 O10 TCW doub 283 n n C1 O8 TCW sing 284 n n C14 C19 TCW doub 285 n y C14 C15 TCW sing 286 n y C19 C18 TCW sing 287 n y C18 C17 TCW doub 288 n y C17 C20 TCW sing 289 n n C17 C16 TCW sing 290 n y C16 C15 TCW doub 291 n y C3 H3 TCW sing 292 n n O7 HO7 TCW sing 293 n n C5 H5 TCW sing 294 n n O8 HO8 TCW sing 295 n n C19 H19 TCW sing 296 n n C18 H18 TCW sing 297 n n C20 H20 TCW sing 298 n n C20 H20A TCW sing 299 n n C20 H20B TCW sing 300 n n C16 H16 TCW sing 301 n n C15 H15 TCW sing 302 n n # _atom_sites.entry_id 5A6I _atom_sites.fract_transf_matrix[1][1] 0.023538 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015988 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TCW A 1 1124 1124 TCW TCW . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 TCW . . . B 2 1.742 21.556 82.99 0.5 35.84 ? O13 TCW 1124 A 1 HETATM 2 C C12 TCW . . . B 2 1.033 21.35 83.953 0.5 30.26 ? C12 TCW 1124 A 1 HETATM 3 C C4 TCW . . . B 2 0.631 19.912 84.132 0.5 33 ? C4 TCW 1124 A 1 HETATM 4 C C3 TCW . . . B 2 1.3 18.89 83.434 0.5 32.16 ? C3 TCW 1124 A 1 HETATM 5 C C2 TCW . . . B 2 0.918 17.56 83.619 0.5 32.35 ? C2 TCW 1124 A 1 HETATM 6 O O7 TCW . . . B 2 1.537 16.536 82.952 0.5 49.54 ? O7 TCW 1124 A 1 HETATM 7 C C5 TCW . . . B 2 -0.396 19.579 85.007 0.5 36.67 ? C5 TCW 1124 A 1 HETATM 8 C C6 TCW . . . B 2 -0.782 18.241 85.181 0.5 32.9 ? C6 TCW 1124 A 1 HETATM 9 N N9 TCW . . . B 2 -1.899 17.903 86.126 0.5 37.26 ? N9 TCW 1124 A 1 HETATM 10 O O11 TCW . . . B 2 -2.253 16.747 86.291 0.5 57.22 ? O11 TCW 1124 A 1 HETATM 11 O O10 TCW . . . B 2 -2.406 18.765 86.673 0.5 37.63 ? O10 TCW 1124 A 1 HETATM 12 C C1 TCW . . . B 2 -0.126 17.212 84.497 0.5 34.77 ? C1 TCW 1124 A 1 HETATM 13 O O8 TCW . . . B 2 -0.52 15.925 84.695 0.5 50.94 ? O8 TCW 1124 A 1 HETATM 14 C C14 TCW . . . B 2 0.664 22.508 84.844 0.5 33.96 ? C14 TCW 1124 A 1 HETATM 15 C C19 TCW . . . B 2 0.139 23.71 84.329 0.5 46.89 ? C19 TCW 1124 A 1 HETATM 16 C C18 TCW . . . B 2 -0.224 24.794 85.151 0.5 32.95 ? C18 TCW 1124 A 1 HETATM 17 C C17 TCW . . . B 2 -0.072 24.714 86.536 0.5 29.22 ? C17 TCW 1124 A 1 HETATM 18 C C20 TCW . . . B 2 -0.448 25.842 87.445 0.5 22.18 ? C20 TCW 1124 A 1 HETATM 19 C C16 TCW . . . B 2 0.428 23.516 87.042 0.5 32.94 ? C16 TCW 1124 A 1 HETATM 20 C C15 TCW . . . B 2 0.79 22.443 86.225 0.5 32.27 ? C15 TCW 1124 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #