data_5A9T
#
_model_server_result.job_id            334BlyCyH1KJeGO3jiqfwg 
_model_server_result.datetime_utc      '2024-12-14 23:39:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5a9t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1291}' 
#
_entry.id    5A9T 
#
_exptl.entry_id    5A9T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.217 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1R)-1-methyl-1,2,3,4-tetrahydroisoquinoline 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5A9T 
_cell.length_a            79.999 
_cell.length_b            91.05 
_cell.length_c            90.976 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5A9T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 45.488 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 256 A GLY 256 3_555 C CA CA . A CA 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc2 A OXT ARG 290 A ARG 290 1_555 C CA CA . A CA 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
metalc ? metalc3 A O ARG 290 A ARG 290 1_555 C CA CA . A CA 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc4 C CA CA . A CA 1292 1_555 E O HOH . A HOH 2109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? 
metalc ? metalc5 C CA CA . A CA 1292 1_555 E O HOH . A HOH 2110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
#
_chem_comp.formula           'C10 H13 N' 
_chem_comp.formula_weight    147.217 
_chem_comp.id                YLG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1R)-1-methyl-1,2,3,4-tetrahydroisoquinoline 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C14 YLG sing 382 n n 
C4 C3 YLG sing 383 n n 
C14 C5 YLG sing 384 n y 
C14 C13 YLG doub 385 n y 
C5 C6 YLG doub 386 n y 
C5 C10 YLG sing 387 n n 
C6 C11 YLG sing 388 n y 
C11 C12 YLG doub 389 n y 
C8 C10 YLG sing 390 n n 
C10 N2 YLG sing 391 n n 
C12 C13 YLG sing 392 n y 
N2 C3 YLG sing 393 n n 
C4 H41C YLG sing 394 n n 
C4 H42C YLG sing 395 n n 
C3 H31C YLG sing 396 n n 
C3 H32C YLG sing 397 n n 
C13 H13 YLG sing 398 n n 
C6 H6 YLG sing 399 n n 
C10 H10 YLG sing 400 n n 
C11 H11 YLG sing 401 n n 
C12 H12 YLG sing 402 n n 
C8 H81C YLG sing 403 n n 
C8 H82C YLG sing 404 n n 
C8 H83C YLG sing 405 n n 
N2 H2 YLG sing 406 n n 
#
_atom_sites.entry_id                     5A9T 
_atom_sites.fract_transf_matrix[1][1]    0.0125 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010983 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010992 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 YLG A 1 1291 1291 YLG YLG . 
C 3 CA A 1 1292 1292 CA CA . 
D 4 ACT A 1 1293 1293 ACT ACT . 
E 5 HOH A 1 2001 2001 HOH HOH . 
E 5 HOH A 2 2002 2002 HOH HOH . 
E 5 HOH A 3 2003 2003 HOH HOH . 
E 5 HOH A 4 2004 2004 HOH HOH . 
E 5 HOH A 5 2005 2005 HOH HOH . 
E 5 HOH A 6 2006 2006 HOH HOH . 
E 5 HOH A 7 2007 2007 HOH HOH . 
E 5 HOH A 8 2008 2008 HOH HOH . 
E 5 HOH A 9 2009 2009 HOH HOH . 
E 5 HOH A 10 2010 2010 HOH HOH . 
E 5 HOH A 11 2011 2011 HOH HOH . 
E 5 HOH A 12 2012 2012 HOH HOH . 
E 5 HOH A 13 2013 2013 HOH HOH . 
E 5 HOH A 14 2014 2014 HOH HOH . 
E 5 HOH A 15 2015 2015 HOH HOH . 
E 5 HOH A 16 2016 2016 HOH HOH . 
E 5 HOH A 17 2017 2017 HOH HOH . 
E 5 HOH A 18 2018 2018 HOH HOH . 
E 5 HOH A 19 2019 2019 HOH HOH . 
E 5 HOH A 20 2020 2020 HOH HOH . 
E 5 HOH A 21 2021 2021 HOH HOH . 
E 5 HOH A 22 2022 2022 HOH HOH . 
E 5 HOH A 23 2023 2023 HOH HOH . 
E 5 HOH A 24 2024 2024 HOH HOH . 
E 5 HOH A 25 2025 2025 HOH HOH . 
E 5 HOH A 26 2026 2026 HOH HOH . 
E 5 HOH A 27 2027 2027 HOH HOH . 
E 5 HOH A 28 2028 2028 HOH HOH . 
E 5 HOH A 29 2029 2029 HOH HOH . 
E 5 HOH A 30 2030 2030 HOH HOH . 
E 5 HOH A 31 2031 2031 HOH HOH . 
E 5 HOH A 32 2032 2032 HOH HOH . 
E 5 HOH A 33 2033 2033 HOH HOH . 
E 5 HOH A 34 2034 2034 HOH HOH . 
E 5 HOH A 35 2035 2035 HOH HOH . 
E 5 HOH A 36 2036 2036 HOH HOH . 
E 5 HOH A 37 2037 2037 HOH HOH . 
E 5 HOH A 38 2038 2038 HOH HOH . 
E 5 HOH A 39 2039 2039 HOH HOH . 
E 5 HOH A 40 2040 2040 HOH HOH . 
E 5 HOH A 41 2041 2041 HOH HOH . 
E 5 HOH A 42 2042 2042 HOH HOH . 
E 5 HOH A 43 2043 2043 HOH HOH . 
E 5 HOH A 44 2044 2044 HOH HOH . 
E 5 HOH A 45 2045 2045 HOH HOH . 
E 5 HOH A 46 2046 2046 HOH HOH . 
E 5 HOH A 47 2047 2047 HOH HOH . 
E 5 HOH A 48 2048 2048 HOH HOH . 
E 5 HOH A 49 2049 2049 HOH HOH . 
E 5 HOH A 50 2050 2050 HOH HOH . 
E 5 HOH A 51 2051 2051 HOH HOH . 
E 5 HOH A 52 2052 2052 HOH HOH . 
E 5 HOH A 53 2053 2053 HOH HOH . 
E 5 HOH A 54 2054 2054 HOH HOH . 
E 5 HOH A 55 2055 2055 HOH HOH . 
E 5 HOH A 56 2056 2056 HOH HOH . 
E 5 HOH A 57 2057 2057 HOH HOH . 
E 5 HOH A 58 2058 2058 HOH HOH . 
E 5 HOH A 59 2059 2059 HOH HOH . 
E 5 HOH A 60 2060 2060 HOH HOH . 
E 5 HOH A 61 2061 2061 HOH HOH . 
E 5 HOH A 62 2062 2062 HOH HOH . 
E 5 HOH A 63 2063 2063 HOH HOH . 
E 5 HOH A 64 2064 2064 HOH HOH . 
E 5 HOH A 65 2065 2065 HOH HOH . 
E 5 HOH A 66 2066 2066 HOH HOH . 
E 5 HOH A 67 2067 2067 HOH HOH . 
E 5 HOH A 68 2068 2068 HOH HOH . 
E 5 HOH A 69 2069 2069 HOH HOH . 
E 5 HOH A 70 2070 2070 HOH HOH . 
E 5 HOH A 71 2071 2071 HOH HOH . 
E 5 HOH A 72 2072 2072 HOH HOH . 
E 5 HOH A 73 2073 2073 HOH HOH . 
E 5 HOH A 74 2074 2074 HOH HOH . 
E 5 HOH A 75 2075 2075 HOH HOH . 
E 5 HOH A 76 2076 2076 HOH HOH . 
E 5 HOH A 77 2077 2077 HOH HOH . 
E 5 HOH A 78 2078 2078 HOH HOH . 
E 5 HOH A 79 2079 2079 HOH HOH . 
E 5 HOH A 80 2080 2080 HOH HOH . 
E 5 HOH A 81 2081 2081 HOH HOH . 
E 5 HOH A 82 2082 2082 HOH HOH . 
E 5 HOH A 83 2083 2083 HOH HOH . 
E 5 HOH A 84 2084 2084 HOH HOH . 
E 5 HOH A 85 2085 2085 HOH HOH . 
E 5 HOH A 86 2086 2086 HOH HOH . 
E 5 HOH A 87 2087 2087 HOH HOH . 
E 5 HOH A 88 2088 2088 HOH HOH . 
E 5 HOH A 89 2089 2089 HOH HOH . 
E 5 HOH A 90 2090 2090 HOH HOH . 
E 5 HOH A 91 2091 2091 HOH HOH . 
E 5 HOH A 92 2092 2092 HOH HOH . 
E 5 HOH A 93 2093 2093 HOH HOH . 
E 5 HOH A 94 2094 2094 HOH HOH . 
E 5 HOH A 95 2095 2095 HOH HOH . 
E 5 HOH A 96 2096 2096 HOH HOH . 
E 5 HOH A 97 2097 2097 HOH HOH . 
E 5 HOH A 98 2098 2098 HOH HOH . 
E 5 HOH A 99 2099 2099 HOH HOH . 
E 5 HOH A 100 2100 2100 HOH HOH . 
E 5 HOH A 101 2101 2101 HOH HOH . 
E 5 HOH A 102 2102 2102 HOH HOH . 
E 5 HOH A 103 2103 2103 HOH HOH . 
E 5 HOH A 104 2104 2104 HOH HOH . 
E 5 HOH A 105 2105 2105 HOH HOH . 
E 5 HOH A 106 2106 2106 HOH HOH . 
E 5 HOH A 107 2107 2107 HOH HOH . 
E 5 HOH A 108 2108 2108 HOH HOH . 
E 5 HOH A 109 2109 2109 HOH HOH . 
E 5 HOH A 110 2110 2110 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 YLG . . . B 2 0.915 11.634 34.664 1 38.18 ? C4 YLG 1291 A 1 
HETATM 2 C C14 YLG . . . B 2 2.096 11.447 33.949 1 29.23 ? C14 YLG 1291 A 1 
HETATM 3 C C5 YLG . . . B 2 3.409 11.685 34.451 1 27.63 ? C5 YLG 1291 A 1 
HETATM 4 C C6 YLG . . . B 2 4.572 11.53 33.745 1 29.25 ? C6 YLG 1291 A 1 
HETATM 5 C C11 YLG . . . B 2 4.365 11.086 32.464 1 24.72 ? C11 YLG 1291 A 1 
HETATM 6 C C8 YLG . . . B 2 4.186 13.634 35.827 1 40.22 ? C8 YLG 1291 A 1 
HETATM 7 C C10 YLG . . . B 2 3.639 12.175 35.816 1 40.93 ? C10 YLG 1291 A 1 
HETATM 8 C C12 YLG . . . B 2 3.078 10.839 31.922 1 23.81 ? C12 YLG 1291 A 1 
HETATM 9 C C13 YLG . . . B 2 1.903 10.983 32.647 1 24.69 ? C13 YLG 1291 A 1 
HETATM 10 N N2 YLG . . . B 2 2.392 12.067 36.58 1 38.6 ? N2 YLG 1291 A 1 
HETATM 11 C C3 YLG . . . B 2 1.113 12.426 36.018 1 39.26 ? C3 YLG 1291 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           376 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           11 
#