data_5AAG # _model_server_result.job_id 2YDb7YyIbi18LXalxoKmOw _model_server_result.datetime_utc '2024-12-21 12:35:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5aag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1389}' # _entry.id 5AAG # _exptl.entry_id 5AAG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 530.024 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[3-[[4-[6-chloranyl-2-(1,3-dimethylpyrazol-4-yl)-3H-imidazo[4,5-b]pyridin-7-yl]pyrazol-1-yl]methyl]phenyl]-(4-methylpiperazin-1-yl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5AAG _cell.length_a 82.59 _cell.length_b 82.59 _cell.length_c 168.84 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H28 Cl N9 O' _chem_comp.formula_weight 530.024 _chem_comp.id 6F2 _chem_comp.mon_nstd_flag . _chem_comp.name '[3-[[4-[6-chloranyl-2-(1,3-dimethylpyrazol-4-yl)-3H-imidazo[4,5-b]pyridin-7-yl]pyrazol-1-yl]methyl]phenyl]-(4-methylpiperazin-1-yl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 6F2 sing 1 n n N02 C03 6F2 sing 2 n n N02 C38 6F2 sing 3 n n C03 C04 6F2 sing 4 n n C04 N05 6F2 sing 5 n n N05 C06 6F2 sing 6 n n N05 C37 6F2 sing 7 n n C06 O07 6F2 doub 8 n n C06 C08 6F2 sing 9 n n C08 C09 6F2 sing 10 n y C08 C36 6F2 doub 11 n y C09 C10 6F2 doub 12 n y C10 C11 6F2 sing 13 n y C11 C12 6F2 doub 14 n y C12 C13 6F2 sing 15 n n C12 C36 6F2 sing 16 n y C13 N14 6F2 sing 17 n n N14 C15 6F2 sing 18 n y N14 N35 6F2 sing 19 n y C15 C16 6F2 doub 20 n y C16 C17 6F2 sing 21 n n C16 C34 6F2 sing 22 n y C17 C18 6F2 sing 23 n y C17 C33 6F2 doub 24 n y C18 CL 6F2 sing 25 n n C18 C20 6F2 doub 26 n y C20 N21 6F2 sing 27 n y N21 C22 6F2 doub 28 n y C22 N23 6F2 sing 29 n y C22 C33 6F2 sing 30 n y N23 C24 6F2 sing 31 n y C24 C25 6F2 sing 32 n n C24 N32 6F2 doub 33 n y C25 C26 6F2 doub 34 n y C25 C30 6F2 sing 35 n y C26 N27 6F2 sing 36 n y N27 C28 6F2 sing 37 n n N27 N29 6F2 sing 38 n y N29 C30 6F2 doub 39 n y C30 C31 6F2 sing 40 n n N32 C33 6F2 sing 41 n y C34 N35 6F2 doub 42 n y C37 C38 6F2 sing 43 n n C01 H011 6F2 sing 44 n n C01 H012 6F2 sing 45 n n C01 H013 6F2 sing 46 n n C03 H031 6F2 sing 47 n n C03 H032 6F2 sing 48 n n C38 H381 6F2 sing 49 n n C38 H382 6F2 sing 50 n n C04 H041 6F2 sing 51 n n C04 H042 6F2 sing 52 n n C37 H371 6F2 sing 53 n n C37 H372 6F2 sing 54 n n C09 H09 6F2 sing 55 n n C36 H36 6F2 sing 56 n n C10 H10 6F2 sing 57 n n C11 H11 6F2 sing 58 n n C13 H131 6F2 sing 59 n n C13 H132 6F2 sing 60 n n C15 H15 6F2 sing 61 n n C34 H34 6F2 sing 62 n n C20 H20 6F2 sing 63 n n N23 H23 6F2 sing 64 n n C26 H26 6F2 sing 65 n n C28 H281 6F2 sing 66 n n C28 H282 6F2 sing 67 n n C28 H283 6F2 sing 68 n n C31 H311 6F2 sing 69 n n C31 H312 6F2 sing 70 n n C31 H313 6F2 sing 71 n n # _atom_sites.entry_id 5AAG _atom_sites.fract_transf_matrix[1][1] 0.012108 _atom_sites.fract_transf_matrix[1][2] 0.006991 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005923 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 6F2 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1389 _pdbx_nonpoly_scheme.auth_seq_num 1389 _pdbx_nonpoly_scheme.pdb_mon_id 6F2 _pdbx_nonpoly_scheme.auth_mon_id 6F2 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 6F2 . . . B 2 -6.639 31.855 6.142 1 171.67 ? C01 6F2 1389 A 1 HETATM 2 N N02 6F2 . . . B 2 -6.052 31.635 5.079 1 177.84 ? N02 6F2 1389 A 1 HETATM 3 C C03 6F2 . . . B 2 -5.636 32.826 4.472 1 180.9 ? C03 6F2 1389 A 1 HETATM 4 C C04 6F2 . . . B 2 -4.91 32.569 3.16 1 182.45 ? C04 6F2 1389 A 1 HETATM 5 N N05 6F2 . . . B 2 -5.617 31.769 2.299 1 179.54 ? N05 6F2 1389 A 1 HETATM 6 C C06 6F2 . . . B 2 -5.787 32.107 0.902 1 164.81 ? C06 6F2 1389 A 1 HETATM 7 O O07 6F2 . . . B 2 -5.301 33.128 0.463 1 163.88 ? O07 6F2 1389 A 1 HETATM 8 C C08 6F2 . . . B 2 -6.558 31.213 -0.07 1 147.89 ? C08 6F2 1389 A 1 HETATM 9 C C09 6F2 . . . B 2 -7.944 31.267 -0.146 1 131.8 ? C09 6F2 1389 A 1 HETATM 10 C C10 6F2 . . . B 2 -8.628 30.439 -1.048 1 116.34 ? C10 6F2 1389 A 1 HETATM 11 C C11 6F2 . . . B 2 -7.914 29.559 -1.877 1 107.46 ? C11 6F2 1389 A 1 HETATM 12 C C12 6F2 . . . B 2 -6.533 29.498 -1.79 1 119.1 ? C12 6F2 1389 A 1 HETATM 13 C C13 6F2 . . . B 2 -5.752 28.557 -2.685 1 110.98 ? C13 6F2 1389 A 1 HETATM 14 N N14 6F2 . . . B 2 -5.885 29.081 -4.083 1 104.61 ? N14 6F2 1389 A 1 HETATM 15 C C15 6F2 . . . B 2 -4.903 29.702 -4.77 1 110.29 ? C15 6F2 1389 A 1 HETATM 16 C C16 6F2 . . . B 2 -5.412 30.056 -6.039 1 115.4 ? C16 6F2 1389 A 1 HETATM 17 C C17 6F2 . . . B 2 -4.711 30.728 -7.064 1 107.86 ? C17 6F2 1389 A 1 HETATM 18 C C18 6F2 . . . B 2 -4.863 30.397 -8.426 1 102.37 ? C18 6F2 1389 A 1 HETATM 19 CL CL 6F2 . . . B 2 -5.923 29.127 -8.962 1 113.98 ? CL 6F2 1389 A 1 HETATM 20 C C20 6F2 . . . B 2 -4.137 31.114 -9.403 1 96.15 ? C20 6F2 1389 A 1 HETATM 21 N N21 6F2 . . . B 2 -3.301 32.105 -9.067 1 91.69 ? N21 6F2 1389 A 1 HETATM 22 C C22 6F2 . . . B 2 -3.127 32.458 -7.738 1 93.19 ? C22 6F2 1389 A 1 HETATM 23 N N23 6F2 . . . B 2 -2.345 33.423 -7.129 1 92.9 ? N23 6F2 1389 A 1 HETATM 24 C C24 6F2 . . . B 2 -2.536 33.358 -5.783 1 90.18 ? C24 6F2 1389 A 1 HETATM 25 C C25 6F2 . . . B 2 -1.881 34.21 -4.854 1 85.38 ? C25 6F2 1389 A 1 HETATM 26 C C26 6F2 . . . B 2 -1.012 35.254 -5.208 1 86.97 ? C26 6F2 1389 A 1 HETATM 27 N N27 6F2 . . . B 2 -0.577 35.84 -4.083 1 92.82 ? N27 6F2 1389 A 1 HETATM 28 C C28 6F2 . . . B 2 0.334 36.959 -4.023 1 93.88 ? C28 6F2 1389 A 1 HETATM 29 N N29 6F2 . . . B 2 -1.133 35.209 -3.018 1 87.21 ? N29 6F2 1389 A 1 HETATM 30 C C30 6F2 . . . B 2 -1.933 34.21 -3.462 1 78.46 ? C30 6F2 1389 A 1 HETATM 31 C C31 6F2 . . . B 2 -2.726 33.278 -2.569 1 81.01 ? C31 6F2 1389 A 1 HETATM 32 N N32 6F2 . . . B 2 -3.429 32.369 -5.531 1 89.95 ? N32 6F2 1389 A 1 HETATM 33 C C33 6F2 . . . B 2 -3.814 31.791 -6.741 1 98.79 ? C33 6F2 1389 A 1 HETATM 34 C C34 6F2 . . . B 2 -6.73 29.636 -6.056 1 123.59 ? C34 6F2 1389 A 1 HETATM 35 N N35 6F2 . . . B 2 -6.993 29.038 -4.849 1 117.86 ? N35 6F2 1389 A 1 HETATM 36 C C36 6F2 . . . B 2 -5.848 30.331 -0.894 1 138.98 ? C36 6F2 1389 A 1 HETATM 37 C C37 6F2 . . . B 2 -6.117 30.634 2.877 1 181.12 ? C37 6F2 1389 A 1 HETATM 38 C C38 6F2 . . . B 2 -6.839 30.881 4.201 1 179.44 ? C38 6F2 1389 A 1 HETATM 39 H H011 6F2 . . . B 2 -7.374 32.499 5.986 1 206 ? H011 6F2 1389 A 1 HETATM 40 H H012 6F2 . . . B 2 -7.013 31.008 6.496 1 206 ? H012 6F2 1389 A 1 HETATM 41 H H013 6F2 . . . B 2 -5.999 32.236 6.801 1 206 ? H013 6F2 1389 A 1 HETATM 42 H H031 6F2 . . . B 2 -6.424 33.397 4.307 1 217.07 ? H031 6F2 1389 A 1 HETATM 43 H H032 6F2 . . . B 2 -5.043 33.317 5.089 1 217.07 ? H032 6F2 1389 A 1 HETATM 44 H H381 6F2 . . . B 2 -7.05 30.021 4.615 1 215.33 ? H381 6F2 1389 A 1 HETATM 45 H H382 6F2 . . . B 2 -7.686 31.373 4.023 1 215.33 ? H382 6F2 1389 A 1 HETATM 46 H H041 6F2 . . . B 2 -4.733 33.436 2.717 1 218.94 ? H041 6F2 1389 A 1 HETATM 47 H H042 6F2 . . . B 2 -4.048 32.133 3.358 1 218.94 ? H042 6F2 1389 A 1 HETATM 48 H H371 6F2 . . . B 2 -6.745 30.204 2.241 1 217.34 ? H371 6F2 1389 A 1 HETATM 49 H H372 6F2 . . . B 2 -5.373 29.996 3.024 1 217.34 ? H372 6F2 1389 A 1 HETATM 50 H H09 6F2 . . . B 2 -8.445 31.888 0.433 1 158.17 ? H09 6F2 1389 A 1 HETATM 51 H H36 6F2 . . . B 2 -4.863 30.294 -0.839 1 166.78 ? H36 6F2 1389 A 1 HETATM 52 H H10 6F2 . . . B 2 -9.593 30.477 -1.102 1 139.61 ? H10 6F2 1389 A 1 HETATM 53 H H11 6F2 . . . B 2 -8.399 28.971 -2.51 1 128.95 ? H11 6F2 1389 A 1 HETATM 54 H H131 6F2 . . . B 2 -4.789 28.575 -2.43 1 133.18 ? H131 6F2 1389 A 1 HETATM 55 H H132 6F2 . . . B 2 -6.107 27.632 -2.607 1 133.18 ? H132 6F2 1389 A 1 HETATM 56 H H15 6F2 . . . B 2 -4.007 29.868 -4.453 1 132.35 ? H15 6F2 1389 A 1 HETATM 57 H H34 6F2 . . . B 2 -7.353 29.732 -6.796 1 148.31 ? H34 6F2 1389 A 1 HETATM 58 H H20 6F2 . . . B 2 -4.248 30.874 -10.364 1 115.38 ? H20 6F2 1389 A 1 HETATM 59 H H23 6F2 . . . B 2 -1.786 34.006 -7.561 1 111.48 ? H23 6F2 1389 A 1 HETATM 60 H H26 6F2 . . . B 2 -0.77 35.508 -6.111 1 104.36 ? H26 6F2 1389 A 1 HETATM 61 H H281 6F2 . . . B 2 -0.168 37.8 -4.094 1 112.66 ? H281 6F2 1389 A 1 HETATM 62 H H282 6F2 . . . B 2 0.982 36.895 -4.77 1 112.66 ? H282 6F2 1389 A 1 HETATM 63 H H283 6F2 . . . B 2 0.83 36.934 -3.169 1 112.66 ? H283 6F2 1389 A 1 HETATM 64 H H311 6F2 . . . B 2 -2.114 32.785 -1.987 1 97.21 ? H311 6F2 1389 A 1 HETATM 65 H H312 6F2 . . . B 2 -3.234 32.642 -3.125 1 97.21 ? H312 6F2 1389 A 1 HETATM 66 H H313 6F2 . . . B 2 -3.35 33.803 -2.019 1 97.21 ? H313 6F2 1389 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 471 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 66 #