data_5ADQ # _model_server_result.job_id OlzDGd4IM-kTo4uo9kejBA _model_server_result.datetime_utc '2024-11-05 19:29:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5adq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2117}' # _entry.id 5ADQ # _exptl.entry_id 5ADQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 434.484 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-(4-(((4-(4-methoxyphenyl)oxan-4- yl)methyl)carbamoyl)phenyl)furan-2-carboxamide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ADQ _cell.length_a 66.17 _cell.length_b 66.17 _cell.length_c 121.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ADQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 C ZN ZN . A ZN 2114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 C ZN ZN . A ZN 2114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 C ZN ZN . A ZN 2114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 C ZN ZN . A ZN 2114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? # _chem_comp.formula 'C25 H26 N2 O5' _chem_comp.formula_weight 434.484 _chem_comp.id A95 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-(4-(((4-(4-methoxyphenyl)oxan-4- yl)methyl)carbamoyl)phenyl)furan-2-carboxamide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'JW55 Inhibitor' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N A95 sing 1 n n C O A95 doub 2 n n C C1 A95 sing 3 n n N C5 A95 sing 4 n n C1 O1 A95 sing 5 n y C1 C4 A95 doub 6 n y N1 C11 A95 sing 7 n n N1 C12 A95 sing 8 n n O1 C2 A95 sing 9 n y C2 C3 A95 doub 10 n y O2 C11 A95 doub 11 n n C3 C4 A95 sing 12 n y O3 C17 A95 sing 13 n n O3 C18 A95 sing 14 n n O4 C22 A95 sing 15 n n O4 C23 A95 sing 16 n n C5 C6 A95 doub 17 n y C5 C10 A95 sing 18 n y C6 C7 A95 sing 19 n y C7 C8 A95 doub 20 n y C8 C9 A95 sing 21 n y C8 C11 A95 sing 22 n n C9 C10 A95 doub 23 n y C12 C13 A95 sing 24 n n C13 C14 A95 sing 25 n n C13 C21 A95 sing 26 n n C13 C24 A95 sing 27 n n C14 C15 A95 doub 28 n y C14 C20 A95 sing 29 n y C15 C16 A95 sing 30 n y C16 C17 A95 doub 31 n y C17 C19 A95 sing 32 n y C19 C20 A95 doub 33 n y C21 C22 A95 sing 34 n n C23 C24 A95 sing 35 n n N HN A95 sing 36 n n N1 HN1 A95 sing 37 n n C2 H2 A95 sing 38 n n C3 H3 A95 sing 39 n n C4 H4 A95 sing 40 n n C6 H6 A95 sing 41 n n C7 H7 A95 sing 42 n n C9 H9 A95 sing 43 n n C10 H10 A95 sing 44 n n C12 H12 A95 sing 45 n n C12 H12A A95 sing 46 n n C15 H15 A95 sing 47 n n C16 H16 A95 sing 48 n n C18 H18 A95 sing 49 n n C18 H18A A95 sing 50 n n C18 H18B A95 sing 51 n n C19 H19 A95 sing 52 n n C20 H20 A95 sing 53 n n C21 H21 A95 sing 54 n n C21 H21A A95 sing 55 n n C22 H22 A95 sing 56 n n C22 H22A A95 sing 57 n n C23 H23 A95 sing 58 n n C23 H23A A95 sing 59 n n C24 H24 A95 sing 60 n n C24 H24A A95 sing 61 n n # _atom_sites.entry_id 5ADQ _atom_sites.fract_transf_matrix[1][1] 0.015113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008223 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 2114 2114 ZN ZN . D 4 SO4 A 1 2115 2115 SO4 SO4 . E 4 SO4 A 1 2116 2116 SO4 SO4 . F 5 A95 A 1 2117 2117 A95 A95 . G 6 BCT A 1 2118 2118 BCT BCT . H 7 GOL A 1 2119 2119 GOL GOL . I 8 HOH A 1 2001 2001 HOH HOH . I 8 HOH A 2 2002 2002 HOH HOH . I 8 HOH A 3 2003 2003 HOH HOH . I 8 HOH A 4 2004 2004 HOH HOH . I 8 HOH A 5 2005 2005 HOH HOH . I 8 HOH A 6 2006 2006 HOH HOH . I 8 HOH A 7 2007 2007 HOH HOH . I 8 HOH A 8 2008 2008 HOH HOH . I 8 HOH A 9 2009 2009 HOH HOH . I 8 HOH A 10 2010 2010 HOH HOH . I 8 HOH A 11 2011 2011 HOH HOH . I 8 HOH A 12 2012 2012 HOH HOH . I 8 HOH A 13 2013 2013 HOH HOH . I 8 HOH A 14 2014 2014 HOH HOH . I 8 HOH A 15 2015 2015 HOH HOH . I 8 HOH A 16 2016 2016 HOH HOH . I 8 HOH A 17 2017 2017 HOH HOH . I 8 HOH A 18 2018 2018 HOH HOH . I 8 HOH A 19 2019 2019 HOH HOH . I 8 HOH A 20 2020 2020 HOH HOH . I 8 HOH A 21 2021 2021 HOH HOH . I 8 HOH A 22 2022 2022 HOH HOH . I 8 HOH A 23 2023 2023 HOH HOH . I 8 HOH A 24 2024 2024 HOH HOH . I 8 HOH A 25 2025 2025 HOH HOH . I 8 HOH A 26 2026 2026 HOH HOH . I 8 HOH A 27 2027 2027 HOH HOH . I 8 HOH A 28 2028 2028 HOH HOH . I 8 HOH A 29 2029 2029 HOH HOH . I 8 HOH A 30 2030 2030 HOH HOH . I 8 HOH A 31 2031 2031 HOH HOH . I 8 HOH A 32 2032 2032 HOH HOH . I 8 HOH A 33 2033 2033 HOH HOH . I 8 HOH A 34 2034 2034 HOH HOH . I 8 HOH A 35 2035 2035 HOH HOH . I 8 HOH A 36 2036 2036 HOH HOH . I 8 HOH A 37 2037 2037 HOH HOH . I 8 HOH A 38 2038 2038 HOH HOH . I 8 HOH A 39 2039 2039 HOH HOH . I 8 HOH A 40 2040 2040 HOH HOH . I 8 HOH A 41 2041 2041 HOH HOH . I 8 HOH A 42 2042 2042 HOH HOH . I 8 HOH A 43 2043 2043 HOH HOH . I 8 HOH A 44 2044 2044 HOH HOH . I 8 HOH A 45 2045 2045 HOH HOH . I 8 HOH A 46 2046 2046 HOH HOH . I 8 HOH A 47 2047 2047 HOH HOH . I 8 HOH A 48 2048 2048 HOH HOH . I 8 HOH A 49 2049 2049 HOH HOH . I 8 HOH A 50 2050 2050 HOH HOH . I 8 HOH A 51 2051 2051 HOH HOH . I 8 HOH A 52 2052 2052 HOH HOH . I 8 HOH A 53 2053 2053 HOH HOH . I 8 HOH A 54 2054 2054 HOH HOH . I 8 HOH A 55 2055 2055 HOH HOH . I 8 HOH A 56 2056 2056 HOH HOH . I 8 HOH A 57 2057 2057 HOH HOH . I 8 HOH A 58 2058 2058 HOH HOH . I 8 HOH A 59 2059 2059 HOH HOH . I 8 HOH A 60 2060 2060 HOH HOH . I 8 HOH A 61 2061 2061 HOH HOH . I 8 HOH A 62 2062 2062 HOH HOH . I 8 HOH A 63 2063 2063 HOH HOH . I 8 HOH A 64 2064 2064 HOH HOH . I 8 HOH A 65 2065 2065 HOH HOH . I 8 HOH A 66 2066 2066 HOH HOH . I 8 HOH A 67 2067 2067 HOH HOH . I 8 HOH A 68 2068 2068 HOH HOH . I 8 HOH A 69 2069 2069 HOH HOH . I 8 HOH A 70 2070 2070 HOH HOH . I 8 HOH A 71 2071 2071 HOH HOH . I 8 HOH A 72 2072 2072 HOH HOH . I 8 HOH A 73 2073 2073 HOH HOH . I 8 HOH A 74 2074 2074 HOH HOH . I 8 HOH A 75 2075 2075 HOH HOH . I 8 HOH A 76 2076 2076 HOH HOH . I 8 HOH A 77 2077 2077 HOH HOH . I 8 HOH A 78 2078 2078 HOH HOH . I 8 HOH A 79 2079 2079 HOH HOH . I 8 HOH A 80 2080 2080 HOH HOH . I 8 HOH A 81 2081 2081 HOH HOH . I 8 HOH A 82 2082 2082 HOH HOH . I 8 HOH A 83 2083 2083 HOH HOH . I 8 HOH A 84 2084 2084 HOH HOH . I 8 HOH A 85 2085 2085 HOH HOH . I 8 HOH A 86 2086 2086 HOH HOH . I 8 HOH A 87 2087 2087 HOH HOH . I 8 HOH A 88 2088 2088 HOH HOH . I 8 HOH A 89 2089 2089 HOH HOH . I 8 HOH A 90 2090 2090 HOH HOH . J 8 HOH B 1 2001 2001 HOH HOH . J 8 HOH B 2 2002 2002 HOH HOH . J 8 HOH B 3 2003 2003 HOH HOH . J 8 HOH B 4 2004 2004 HOH HOH . J 8 HOH B 5 2005 2005 HOH HOH . J 8 HOH B 6 2006 2006 HOH HOH . J 8 HOH B 7 2007 2007 HOH HOH . J 8 HOH B 8 2008 2008 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C A95 . . . F 5 1.645 -4.632 -22.48 1 25.93 ? C A95 2117 A 1 HETATM 2 N N A95 . . . F 5 0.721 -5.509 -22.843 1 25.58 ? N A95 2117 A 1 HETATM 3 O O A95 . . . F 5 1.709 -4.164 -21.363 1 27.73 ? O A95 2117 A 1 HETATM 4 C C1 A95 . . . F 5 2.709 -4.289 -23.466 1 28.3 ? C1 A95 2117 A 1 HETATM 5 N N1 A95 . . . F 5 -4.002 -9.135 -20.225 1 28.56 ? N1 A95 2117 A 1 HETATM 6 O O1 A95 . . . F 5 2.68 -4.935 -24.55 1 32.73 ? O1 A95 2117 A 1 HETATM 7 C C2 A95 . . . F 5 3.735 -4.5 -25.354 1 28.76 ? C2 A95 2117 A 1 HETATM 8 O O2 A95 . . . F 5 -2.915 -8.321 -18.482 1 24.55 ? O2 A95 2117 A 1 HETATM 9 C C3 A95 . . . F 5 4.438 -3.551 -24.648 1 28.17 ? C3 A95 2117 A 1 HETATM 10 O O3 A95 . . . F 5 -2.042 -13.85 -24.024 1 30.69 ? O3 A95 2117 A 1 HETATM 11 C C4 A95 . . . F 5 3.787 -3.421 -23.432 1 28.65 ? C4 A95 2117 A 1 HETATM 12 O O4 A95 . . . F 5 -8.332 -11.379 -19.574 1 38.98 ? O4 A95 2117 A 1 HETATM 13 C C5 A95 . . . F 5 -0.176 -6.167 -22.057 1 24.07 ? C5 A95 2117 A 1 HETATM 14 C C6 A95 . . . F 5 -0.253 -6.035 -20.685 1 24.98 ? C6 A95 2117 A 1 HETATM 15 C C7 A95 . . . F 5 -1.198 -6.735 -19.938 1 24.46 ? C7 A95 2117 A 1 HETATM 16 C C8 A95 . . . F 5 -2.13 -7.572 -20.561 1 25.23 ? C8 A95 2117 A 1 HETATM 17 C C9 A95 . . . F 5 -2.06 -7.704 -21.945 1 25.39 ? C9 A95 2117 A 1 HETATM 18 C C10 A95 . . . F 5 -1.108 -6.995 -22.688 1 24.09 ? C10 A95 2117 A 1 HETATM 19 C C11 A95 . . . F 5 -3.094 -8.338 -19.692 1 26.07 ? C11 A95 2117 A 1 HETATM 20 C C12 A95 . . . F 5 -4.737 -10.103 -19.464 1 30.13 ? C12 A95 2117 A 1 HETATM 21 C C13 A95 . . . F 5 -5.518 -11.099 -20.335 1 33.07 ? C13 A95 2117 A 1 HETATM 22 C C14 A95 . . . F 5 -4.608 -11.792 -21.358 1 32.26 ? C14 A95 2117 A 1 HETATM 23 C C15 A95 . . . F 5 -4.568 -11.452 -22.728 1 32.37 ? C15 A95 2117 A 1 HETATM 24 C C16 A95 . . . F 5 -3.726 -12.117 -23.636 1 30.55 ? C16 A95 2117 A 1 HETATM 25 C C17 A95 . . . F 5 -2.887 -13.146 -23.185 1 30.01 ? C17 A95 2117 A 1 HETATM 26 C C18 A95 . . . F 5 -2.034 -13.661 -25.454 1 27.43 ? C18 A95 2117 A 1 HETATM 27 C C19 A95 . . . F 5 -2.909 -13.48 -21.84 1 29.46 ? C19 A95 2117 A 1 HETATM 28 C C20 A95 . . . F 5 -3.743 -12.827 -20.942 1 31.28 ? C20 A95 2117 A 1 HETATM 29 C C21 A95 . . . F 5 -6.694 -10.418 -21.058 1 36.66 ? C21 A95 2117 A 1 HETATM 30 C C22 A95 . . . F 5 -7.888 -10.152 -20.152 1 38.98 ? C22 A95 2117 A 1 HETATM 31 C C23 A95 . . . F 5 -7.361 -11.907 -18.67 1 36.1 ? C23 A95 2117 A 1 HETATM 32 C C24 A95 . . . F 5 -6.057 -12.193 -19.39 1 34.34 ? C24 A95 2117 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #