data_5ADT # _model_server_result.job_id DjG0iJoaEXfeirXis9ijyw _model_server_result.datetime_utc '2024-12-24 18:47:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5adt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2117}' # _entry.id 5ADT # _exptl.entry_id 5ADT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ADT _cell.length_a 66.33 _cell.length_b 66.33 _cell.length_c 120.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ADT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 159 A CYS 1081 1_555 F ZN ZN . A ZN 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc2 A ND1 HIS 162 A HIS 1084 1_555 F ZN ZN . A ZN 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc3 A SG CYS 167 A CYS 1089 1_555 F ZN ZN . A ZN 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc4 A SG CYS 170 A CYS 1092 1_555 F ZN ZN . A ZN 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ADT _atom_sites.fract_transf_matrix[1][1] 0.015076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 BCT A 1 2114 2114 BCT BCT . D 4 SO4 A 1 2115 2115 SO4 SO4 . E 5 1TC A 1 2116 2116 1TC 1TC . F 6 ZN A 1 2117 2117 ZN ZN . G 4 SO4 B 1 2162 2162 SO4 SO4 . H 7 HOH A 1 3001 3001 HOH HOH . H 7 HOH A 2 3002 3002 HOH HOH . H 7 HOH A 3 3003 3003 HOH HOH . H 7 HOH A 4 3004 3004 HOH HOH . H 7 HOH A 5 3005 3005 HOH HOH . H 7 HOH A 6 3006 3006 HOH HOH . H 7 HOH A 7 3007 3007 HOH HOH . H 7 HOH A 8 3008 3008 HOH HOH . H 7 HOH A 9 3009 3009 HOH HOH . H 7 HOH A 10 3010 3010 HOH HOH . H 7 HOH A 11 3011 3011 HOH HOH . H 7 HOH A 12 3012 3012 HOH HOH . H 7 HOH A 13 3013 3013 HOH HOH . H 7 HOH A 14 3014 3014 HOH HOH . H 7 HOH A 15 3015 3015 HOH HOH . H 7 HOH A 16 3016 3016 HOH HOH . H 7 HOH A 17 3017 3017 HOH HOH . H 7 HOH A 18 3018 3018 HOH HOH . H 7 HOH A 19 3019 3019 HOH HOH . H 7 HOH A 20 3020 3020 HOH HOH . H 7 HOH A 21 3021 3021 HOH HOH . H 7 HOH A 22 3022 3022 HOH HOH . H 7 HOH A 23 3023 3023 HOH HOH . H 7 HOH A 24 3024 3024 HOH HOH . H 7 HOH A 25 3025 3025 HOH HOH . H 7 HOH A 26 3026 3026 HOH HOH . H 7 HOH A 27 3027 3027 HOH HOH . H 7 HOH A 28 3028 3028 HOH HOH . H 7 HOH A 29 3029 3029 HOH HOH . H 7 HOH A 30 3030 3030 HOH HOH . H 7 HOH A 31 3031 3031 HOH HOH . H 7 HOH A 32 3032 3032 HOH HOH . H 7 HOH A 33 3033 3033 HOH HOH . H 7 HOH A 34 3034 3034 HOH HOH . H 7 HOH A 35 3035 3035 HOH HOH . H 7 HOH A 36 3036 3036 HOH HOH . H 7 HOH A 37 3037 3037 HOH HOH . H 7 HOH A 38 3038 3038 HOH HOH . H 7 HOH A 39 3039 3039 HOH HOH . H 7 HOH A 40 3040 3040 HOH HOH . H 7 HOH A 41 3041 3041 HOH HOH . H 7 HOH A 42 3042 3042 HOH HOH . H 7 HOH A 43 3043 3043 HOH HOH . H 7 HOH A 44 3044 3044 HOH HOH . H 7 HOH A 45 3045 3045 HOH HOH . H 7 HOH A 46 3046 3046 HOH HOH . H 7 HOH A 47 3047 3047 HOH HOH . H 7 HOH A 48 3048 3048 HOH HOH . H 7 HOH A 49 3049 3049 HOH HOH . H 7 HOH A 50 3050 3050 HOH HOH . H 7 HOH A 51 3051 3051 HOH HOH . H 7 HOH A 52 3052 3052 HOH HOH . H 7 HOH A 53 3053 3053 HOH HOH . H 7 HOH A 54 3054 3054 HOH HOH . H 7 HOH A 55 3055 3055 HOH HOH . H 7 HOH A 56 3056 3056 HOH HOH . H 7 HOH A 57 3057 3057 HOH HOH . H 7 HOH A 58 3058 3058 HOH HOH . H 7 HOH A 59 3059 3059 HOH HOH . H 7 HOH A 60 3060 3060 HOH HOH . H 7 HOH A 61 3061 3061 HOH HOH . H 7 HOH A 62 3062 3062 HOH HOH . H 7 HOH A 63 3063 3063 HOH HOH . H 7 HOH A 64 3064 3064 HOH HOH . H 7 HOH A 65 3065 3065 HOH HOH . H 7 HOH A 66 3066 3066 HOH HOH . H 7 HOH A 67 3067 3067 HOH HOH . H 7 HOH A 68 3068 3068 HOH HOH . H 7 HOH A 69 3069 3069 HOH HOH . H 7 HOH A 70 3070 3070 HOH HOH . H 7 HOH A 71 3071 3071 HOH HOH . H 7 HOH A 72 3072 3072 HOH HOH . H 7 HOH A 73 3073 3073 HOH HOH . H 7 HOH A 74 3074 3074 HOH HOH . H 7 HOH A 75 3075 3075 HOH HOH . H 7 HOH A 76 3076 3076 HOH HOH . H 7 HOH A 77 3077 3077 HOH HOH . H 7 HOH A 78 3078 3078 HOH HOH . H 7 HOH A 79 3079 3079 HOH HOH . H 7 HOH A 80 3080 3080 HOH HOH . H 7 HOH A 81 3081 3081 HOH HOH . H 7 HOH A 82 3082 3082 HOH HOH . H 7 HOH A 83 3083 3083 HOH HOH . H 7 HOH A 84 3084 3084 HOH HOH . H 7 HOH A 85 3085 3085 HOH HOH . H 7 HOH A 86 3086 3086 HOH HOH . H 7 HOH A 87 3087 3087 HOH HOH . H 7 HOH A 88 3088 3088 HOH HOH . H 7 HOH A 89 3089 3089 HOH HOH . H 7 HOH A 90 3090 3090 HOH HOH . H 7 HOH A 91 3091 3091 HOH HOH . H 7 HOH A 92 3092 3092 HOH HOH . H 7 HOH A 93 3093 3093 HOH HOH . H 7 HOH A 94 3094 3094 HOH HOH . H 7 HOH A 95 3095 3095 HOH HOH . H 7 HOH A 96 3096 3096 HOH HOH . H 7 HOH A 97 3097 3097 HOH HOH . H 7 HOH A 98 3098 3098 HOH HOH . H 7 HOH A 99 3099 3099 HOH HOH . H 7 HOH A 100 3100 3100 HOH HOH . H 7 HOH A 101 3101 3101 HOH HOH . H 7 HOH A 102 3102 3102 HOH HOH . H 7 HOH A 103 3103 3103 HOH HOH . H 7 HOH A 104 3104 3104 HOH HOH . H 7 HOH A 105 3105 3105 HOH HOH . H 7 HOH A 106 3106 3106 HOH HOH . H 7 HOH A 107 3107 3107 HOH HOH . H 7 HOH A 108 3108 3108 HOH HOH . H 7 HOH A 109 3109 3109 HOH HOH . I 7 HOH B 1 3001 3001 HOH HOH . I 7 HOH B 2 3002 3002 HOH HOH . I 7 HOH B 3 3003 3003 HOH HOH . I 7 HOH B 4 3004 3004 HOH HOH . I 7 HOH B 5 3005 3005 HOH HOH . I 7 HOH B 6 3006 3006 HOH HOH . I 7 HOH B 7 3007 3007 HOH HOH . I 7 HOH B 8 3008 3008 HOH HOH . I 7 HOH B 9 3009 3009 HOH HOH . I 7 HOH B 10 3010 3010 HOH HOH . I 7 HOH B 11 3011 3011 HOH HOH . I 7 HOH B 12 3012 3012 HOH HOH . I 7 HOH B 13 3013 3013 HOH HOH . I 7 HOH B 14 3014 3014 HOH HOH . I 7 HOH B 15 3015 3015 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x 27.998 _atom_site.Cartn_y -7.855 _atom_site.Cartn_z 22.364 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 2117 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #