data_5AF6 # _model_server_result.job_id EoNwysNnMXsxlCQeTkMPlQ _model_server_result.datetime_utc '2024-11-22 10:22:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5af6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1033}' # _entry.id 5AF6 # _exptl.entry_id 5AF6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.38 _cell.angle_gamma 90 _cell.entry_id 5AF6 _cell.length_a 98.384 _cell.length_b 126.512 _cell.length_c 78.092 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AF6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 PQS dimeric 2 author_and_software_defined_assembly 4 PQS dimeric 2 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,H,M 1 1 B,I,N 2 1 C,G,L 3 1 D,F,K 4 1 E,J,O 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F SG CYS 15 F CYS 13 1_555 K ZN ZN . F ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 F SG CYS 26 F CYS 24 1_555 K ZN ZN . F ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 F SG CYS 29 F CYS 27 1_555 K ZN ZN . F ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc4 G SG CYS 12 G CYS 10 1_555 L ZN ZN . G ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc5 G SG CYS 15 G CYS 13 1_555 L ZN ZN . G ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc6 G SG CYS 26 G CYS 24 1_555 L ZN ZN . G ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc7 G SG CYS 29 G CYS 27 1_555 L ZN ZN . G ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc8 H SG CYS 12 H CYS 10 1_555 M ZN ZN . H ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc9 H SG CYS 15 H CYS 13 1_555 M ZN ZN . H ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc10 H SG CYS 26 H CYS 24 1_555 M ZN ZN . H ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc11 H SG CYS 29 H CYS 27 1_555 M ZN ZN . H ZN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc12 I SG CYS 12 I CYS 10 1_555 N ZN ZN . I ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc13 I SG CYS 15 I CYS 13 1_555 N ZN ZN . I ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc14 I SG CYS 26 I CYS 24 1_555 N ZN ZN . I ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc15 I SG CYS 29 I CYS 27 1_555 N ZN ZN . I ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc16 J SG CYS 12 J CYS 10 1_555 O ZN ZN . J ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc17 J SG CYS 15 J CYS 13 1_555 O ZN ZN . J ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc18 J SG CYS 26 J CYS 24 1_555 O ZN ZN . J ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc19 J SG CYS 29 J CYS 27 1_555 O ZN ZN . J ZN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5AF6 _atom_sites.fract_transf_matrix[1][1] 0.010164 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002418 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007904 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 3 ZN F 1 1033 1033 ZN ZN . L 3 ZN G 1 1034 1034 ZN ZN . M 3 ZN H 1 1034 1034 ZN ZN . N 3 ZN I 1 1033 1033 ZN ZN . O 3 ZN J 1 1033 1033 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 3 _atom_site.Cartn_x -7.992 _atom_site.Cartn_y 31.54 _atom_site.Cartn_z 11.719 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 92.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1033 _atom_site.auth_asym_id J _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #