data_5AHI
#
_model_server_result.job_id            8EUBjb9djMABXQ6rEShMhA 
_model_server_result.datetime_utc      '2024-11-01 04:35:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ahi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1246}' 
#
_entry.id    5AHI 
#
_exptl.entry_id    5AHI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              577.331 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R,3S,4R,5R)-5-[4-aminocarbonyl-5-[(E)-[[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]amino]methylideneamino]imidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5AHI 
_cell.length_a            85.593 
_cell.length_b            85.593 
_cell.length_c            121.31 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AHI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H25 N5 O15 P2' 
_chem_comp.formula_weight    577.331 
_chem_comp.id                GUO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R,3S,4R,5R)-5-[4-aminocarbonyl-5-[(E)-[[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]amino]methylideneamino]imidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2P P1 GUO doub 142 n n 
O3P P1 GUO sing 143 n n 
P1 O5P GUO sing 144 n n 
P1 O4P GUO sing 145 n n 
O5P C6 GUO sing 146 n n 
C6 C9 GUO sing 147 n n 
C6 H6 GUO sing 148 n n 
C6 H6A GUO sing 149 n n 
C12 C9 GUO sing 150 n n 
O11 C9 GUO sing 151 n n 
C9 H9 GUO sing 152 n n 
C20 O11 GUO sing 153 n n 
C16 C12 GUO sing 154 n n 
C12 O14 GUO sing 155 n n 
C12 H12 GUO sing 156 n n 
O14 HO14 GUO sing 157 n n 
O18 C16 GUO sing 158 n n 
C16 C20 GUO sing 159 n n 
C16 H16 GUO sing 160 n n 
O18 HO18 GUO sing 161 n n 
N22 C20 GUO sing 162 n n 
C20 H20 GUO sing 163 n n 
N22 C24 GUO sing 164 n n 
N22 HN22 GUO sing 165 n n 
C24 N26 GUO doub 166 n n 
C24 H24 GUO sing 167 n n 
N26 C27 GUO sing 168 n n 
C28 C27 GUO doub 169 n y 
C27 N37 GUO sing 170 n y 
C29 C28 GUO sing 171 n n 
C28 N34 GUO sing 172 n y 
N31 C29 GUO sing 173 n n 
C29 O30 GUO doub 174 n n 
N31 HN31 GUO sing 175 n n 
N31 HN3A GUO sing 176 n n 
N34 C35 GUO doub 177 n y 
C35 N37 GUO sing 178 n y 
C35 H35 GUO sing 179 n n 
N37 C38 GUO sing 180 n n 
O40 C38 GUO sing 181 n n 
C38 C41 GUO sing 182 n n 
C38 H38 GUO sing 183 n n 
O3P HO3P GUO sing 184 n n 
O40 C49 GUO sing 185 n n 
C45 C41 GUO sing 186 n n 
C41 O43 GUO sing 187 n n 
C41 H41 GUO sing 188 n n 
O43 HO43 GUO sing 189 n n 
C49 C45 GUO sing 190 n n 
C45 O47 GUO sing 191 n n 
C45 H45 GUO sing 192 n n 
O47 HO47 GUO sing 193 n n 
C51 C49 GUO sing 194 n n 
C49 H49 GUO sing 195 n n 
O4P HO4P GUO sing 196 n n 
C51 O54 GUO sing 197 n n 
C51 H51 GUO sing 198 n n 
C51 H51A GUO sing 199 n n 
P55 O54 GUO sing 200 n n 
O56 P55 GUO doub 201 n n 
O58 P55 GUO sing 202 n n 
P55 O57 GUO sing 203 n n 
O57 HO57 GUO sing 204 n n 
O58 HO58 GUO sing 205 n n 
#
_atom_sites.entry_id                     5AHI 
_atom_sites.fract_transf_matrix[1][1]    0.011683 
_atom_sites.fract_transf_matrix[1][2]    0.006745 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013491 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008243 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 1245 1245 GOL GOL . 
C 3 GUO A 1 1246 1246 GUO GUO . 
D 4 PO4 A 1 1247 1247 PO4 PO4 . 
E 5 CL A 1 1248 1248 CL CL . 
F 6 HOH A 1 2001 2001 HOH HOH . 
F 6 HOH A 2 2002 2002 HOH HOH . 
F 6 HOH A 3 2003 2003 HOH HOH . 
F 6 HOH A 4 2004 2004 HOH HOH . 
F 6 HOH A 5 2005 2005 HOH HOH . 
F 6 HOH A 6 2006 2006 HOH HOH . 
F 6 HOH A 7 2007 2007 HOH HOH . 
F 6 HOH A 8 2008 2008 HOH HOH . 
F 6 HOH A 9 2009 2009 HOH HOH . 
F 6 HOH A 10 2010 2010 HOH HOH . 
F 6 HOH A 11 2011 2011 HOH HOH . 
F 6 HOH A 12 2012 2012 HOH HOH . 
F 6 HOH A 13 2013 2013 HOH HOH . 
F 6 HOH A 14 2014 2014 HOH HOH . 
F 6 HOH A 15 2015 2015 HOH HOH . 
F 6 HOH A 16 2016 2016 HOH HOH . 
F 6 HOH A 17 2017 2017 HOH HOH . 
F 6 HOH A 18 2018 2018 HOH HOH . 
F 6 HOH A 19 2019 2019 HOH HOH . 
F 6 HOH A 20 2020 2020 HOH HOH . 
F 6 HOH A 21 2021 2021 HOH HOH . 
F 6 HOH A 22 2022 2022 HOH HOH . 
F 6 HOH A 23 2023 2023 HOH HOH . 
F 6 HOH A 24 2024 2024 HOH HOH . 
F 6 HOH A 25 2025 2025 HOH HOH . 
F 6 HOH A 26 2026 2026 HOH HOH . 
F 6 HOH A 27 2027 2027 HOH HOH . 
F 6 HOH A 28 2028 2028 HOH HOH . 
F 6 HOH A 29 2029 2029 HOH HOH . 
F 6 HOH A 30 2030 2030 HOH HOH . 
F 6 HOH A 31 2031 2031 HOH HOH . 
F 6 HOH A 32 2032 2032 HOH HOH . 
F 6 HOH A 33 2033 2033 HOH HOH . 
F 6 HOH A 34 2034 2034 HOH HOH . 
F 6 HOH A 35 2035 2035 HOH HOH . 
F 6 HOH A 36 2036 2036 HOH HOH . 
F 6 HOH A 37 2037 2037 HOH HOH . 
F 6 HOH A 38 2038 2038 HOH HOH . 
F 6 HOH A 39 2039 2039 HOH HOH . 
F 6 HOH A 40 2040 2040 HOH HOH . 
F 6 HOH A 41 2041 2041 HOH HOH . 
F 6 HOH A 42 2042 2042 HOH HOH . 
F 6 HOH A 43 2043 2043 HOH HOH . 
F 6 HOH A 44 2044 2044 HOH HOH . 
F 6 HOH A 45 2045 2045 HOH HOH . 
F 6 HOH A 46 2046 2046 HOH HOH . 
F 6 HOH A 47 2047 2047 HOH HOH . 
F 6 HOH A 48 2048 2048 HOH HOH . 
F 6 HOH A 49 2049 2049 HOH HOH . 
F 6 HOH A 50 2050 2050 HOH HOH . 
F 6 HOH A 51 2051 2051 HOH HOH . 
F 6 HOH A 52 2052 2052 HOH HOH . 
F 6 HOH A 53 2053 2053 HOH HOH . 
F 6 HOH A 54 2054 2054 HOH HOH . 
F 6 HOH A 55 2055 2055 HOH HOH . 
F 6 HOH A 56 2056 2056 HOH HOH . 
F 6 HOH A 57 2057 2057 HOH HOH . 
F 6 HOH A 58 2058 2058 HOH HOH . 
F 6 HOH A 59 2059 2059 HOH HOH . 
F 6 HOH A 60 2060 2060 HOH HOH . 
F 6 HOH A 61 2061 2061 HOH HOH . 
F 6 HOH A 62 2062 2062 HOH HOH . 
F 6 HOH A 63 2063 2063 HOH HOH . 
F 6 HOH A 64 2064 2064 HOH HOH . 
F 6 HOH A 65 2065 2065 HOH HOH . 
F 6 HOH A 66 2066 2066 HOH HOH . 
F 6 HOH A 67 2067 2067 HOH HOH . 
F 6 HOH A 68 2068 2068 HOH HOH . 
F 6 HOH A 69 2069 2069 HOH HOH . 
F 6 HOH A 70 2070 2070 HOH HOH . 
F 6 HOH A 71 2071 2071 HOH HOH . 
F 6 HOH A 72 2072 2072 HOH HOH . 
F 6 HOH A 73 2073 2073 HOH HOH . 
F 6 HOH A 74 2074 2074 HOH HOH . 
F 6 HOH A 75 2075 2075 HOH HOH . 
F 6 HOH A 76 2076 2076 HOH HOH . 
F 6 HOH A 77 2077 2077 HOH HOH . 
F 6 HOH A 78 2078 2078 HOH HOH . 
F 6 HOH A 79 2079 2079 HOH HOH . 
F 6 HOH A 80 2080 2080 HOH HOH . 
F 6 HOH A 81 2081 2081 HOH HOH . 
F 6 HOH A 82 2082 2082 HOH HOH . 
F 6 HOH A 83 2083 2083 HOH HOH . 
F 6 HOH A 84 2084 2084 HOH HOH . 
F 6 HOH A 85 2085 2085 HOH HOH . 
F 6 HOH A 86 2086 2086 HOH HOH . 
F 6 HOH A 87 2087 2087 HOH HOH . 
F 6 HOH A 88 2088 2088 HOH HOH . 
F 6 HOH A 89 2089 2089 HOH HOH . 
F 6 HOH A 90 2090 2090 HOH HOH . 
F 6 HOH A 91 2091 2091 HOH HOH . 
F 6 HOH A 92 2092 2092 HOH HOH . 
F 6 HOH A 93 2093 2093 HOH HOH . 
F 6 HOH A 94 2094 2094 HOH HOH . 
F 6 HOH A 95 2095 2095 HOH HOH . 
F 6 HOH A 96 2096 2096 HOH HOH . 
F 6 HOH A 97 2097 2097 HOH HOH . 
F 6 HOH A 98 2098 2098 HOH HOH . 
F 6 HOH A 99 2099 2099 HOH HOH . 
F 6 HOH A 100 2100 2100 HOH HOH . 
F 6 HOH A 101 2101 2101 HOH HOH . 
F 6 HOH A 102 2102 2102 HOH HOH . 
F 6 HOH A 103 2103 2103 HOH HOH . 
F 6 HOH A 104 2104 2104 HOH HOH . 
F 6 HOH A 105 2105 2105 HOH HOH . 
F 6 HOH A 106 2106 2106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 GUO . . . C 3 -3.617 24.679 -0.365 1 38.15 ? P1 GUO 1246 A 1 
HETATM 2 C C6 GUO . . . C 3 -1.156 24.935 0.328 1 51.2 ? C6 GUO 1246 A 1 
HETATM 3 C C9 GUO . . . C 3 0.204 24.948 -0.383 1 47.52 ? C9 GUO 1246 A 1 
HETATM 4 O O11 GUO . . . C 3 0.331 26.094 -1.25 1 59.1 ? O11 GUO 1246 A 1 
HETATM 5 C C12 GUO . . . C 3 1.265 25.209 0.657 1 65.9 ? C12 GUO 1246 A 1 
HETATM 6 O O14 GUO . . . C 3 2.563 25.071 0.073 1 64.65 ? O14 GUO 1246 A 1 
HETATM 7 C C16 GUO . . . C 3 1.03 26.658 0.962 1 68.68 ? C16 GUO 1246 A 1 
HETATM 8 O O18 GUO . . . C 3 2.183 27.191 1.61 1 65.09 ? O18 GUO 1246 A 1 
HETATM 9 C C20 GUO . . . C 3 0.937 27.161 -0.469 1 62.91 ? C20 GUO 1246 A 1 
HETATM 10 O O2P GUO . . . C 3 -3.777 25.939 -1.206 1 42.51 ? O2P GUO 1246 A 1 
HETATM 11 O O3P GUO . . . C 3 -4.05 25.005 1.063 1 35.61 ? O3P GUO 1246 A 1 
HETATM 12 O O4P GUO . . . C 3 -4.578 23.638 -0.932 1 40.77 ? O4P GUO 1246 A 1 
HETATM 13 O O5P GUO . . . C 3 -2.134 24.155 -0.365 1 45.47 ? O5P GUO 1246 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           13 
#