data_5AJV # _model_server_result.job_id G8ncwu9lzgoVPniWCytVEQ _model_server_result.datetime_utc '2024-11-06 00:37:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ajv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1449}' # _entry.id 5AJV # _exptl.entry_id 5AJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.359 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2-amino-N-[4-[(2-amino-3-cyano-1H-indol-5-yl)oxy]phenyl]-3-hydroxy-propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5AJV _cell.length_a 102.63 _cell.length_b 102.63 _cell.length_c 258.21 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AJV _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_555 -y,-x,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 43.035 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H17 N5 O3' _chem_comp.formula_weight 351.359 _chem_comp.id 8R2 _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2-amino-N-[4-[(2-amino-3-cyano-1H-indol-5-yl)oxy]phenyl]-3-hydroxy-propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAM CAY 8R2 sing 1 n y CAM CAV 8R2 doub 2 n y CAY CAW 8R2 sing 3 n y CAY CAX 8R2 doub 4 n y CAW CAF 8R2 sing 5 n n CAW CAS 8R2 doub 6 n y CAF NAA 8R2 trip 7 n n CAS NAB 8R2 sing 8 n n CAS NAP 8R2 sing 9 n y NAP CAX 8R2 sing 10 n y CAX CAL 8R2 sing 11 n y CAL CAK 8R2 doub 12 n y CAK CAV 8R2 sing 13 n y CAV OAQ 8R2 sing 14 n n OAQ CAU 8R2 sing 15 n n CAU CAJ 8R2 sing 16 n y CAU CAI 8R2 doub 17 n y CAJ CAH 8R2 doub 18 n y CAH CAT 8R2 sing 19 n y CAI CAG 8R2 sing 20 n y CAG CAT 8R2 doub 21 n y CAT NAO 8R2 sing 22 n n NAO C 8R2 sing 23 n n C O 8R2 doub 24 n n C CA 8R2 sing 25 n n CA N 8R2 sing 26 n n CA CB 8R2 sing 27 n n CB OG 8R2 sing 28 n n CAM HAM 8R2 sing 29 n n NAB HAB1 8R2 sing 30 n n NAB HAB2 8R2 sing 31 n n NAP HAP 8R2 sing 32 n n CAL HAL 8R2 sing 33 n n CAK HAK 8R2 sing 34 n n CAJ HAJ 8R2 sing 35 n n CAI HAI 8R2 sing 36 n n CAH HAH 8R2 sing 37 n n CAG HAG 8R2 sing 38 n n NAO HAO 8R2 sing 39 n n CA HA 8R2 sing 40 n n N HN1 8R2 sing 41 n n N HN2 8R2 sing 42 n n CB HB1C 8R2 sing 43 n n CB HB2C 8R2 sing 44 n n OG HG 8R2 sing 45 n n # _atom_sites.entry_id 5AJV _atom_sites.fract_transf_matrix[1][1] 0.009744 _atom_sites.fract_transf_matrix[1][2] 0.005626 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 B 1 1446 1446 PO4 PO4 . C 2 PO4 B 1 1447 1447 PO4 PO4 . D 2 PO4 B 1 1448 1448 PO4 PO4 . E 3 8R2 B 1 1449 1449 8R2 8R2 . F 4 FDP B 1 1450 1450 FDP FDP . G 5 HOH B 1 2001 2001 HOH HOH . G 5 HOH B 2 2002 2002 HOH HOH . G 5 HOH B 3 2003 2003 HOH HOH . G 5 HOH B 4 2004 2004 HOH HOH . G 5 HOH B 5 2005 2005 HOH HOH . G 5 HOH B 6 2006 2006 HOH HOH . G 5 HOH B 7 2007 2007 HOH HOH . G 5 HOH B 8 2008 2008 HOH HOH . G 5 HOH B 9 2009 2009 HOH HOH . G 5 HOH B 10 2010 2010 HOH HOH . G 5 HOH B 11 2011 2011 HOH HOH . G 5 HOH B 12 2012 2012 HOH HOH . G 5 HOH B 13 2013 2013 HOH HOH . G 5 HOH B 14 2014 2014 HOH HOH . G 5 HOH B 15 2015 2015 HOH HOH . G 5 HOH B 16 2016 2016 HOH HOH . G 5 HOH B 17 2017 2017 HOH HOH . G 5 HOH B 18 2018 2018 HOH HOH . G 5 HOH B 19 2019 2019 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAM 8R2 . . . E 3 42.409 -38.923 13.109 1 59.15 ? CAM 8R2 1449 B 1 HETATM 2 C CAY 8R2 . . . E 3 41.954 -40.067 12.576 1 60.27 ? CAY 8R2 1449 B 1 HETATM 3 C CAW 8R2 . . . E 3 42.543 -41.219 12.231 1 60.19 ? CAW 8R2 1449 B 1 HETATM 4 C CAF 8R2 . . . E 3 43.909 -41.544 12.367 1 62.84 ? CAF 8R2 1449 B 1 HETATM 5 N NAA 8R2 . . . E 3 45.07 -41.875 12.471 1 68.45 ? NAA 8R2 1449 B 1 HETATM 6 C CAS 8R2 . . . E 3 41.65 -42.041 11.724 1 61.48 ? CAS 8R2 1449 B 1 HETATM 7 N NAB 8R2 . . . E 3 41.841 -43.269 11.272 1 64.46 ? NAB 8R2 1449 B 1 HETATM 8 N NAP 8R2 . . . E 3 40.466 -41.423 11.73 1 62.04 ? NAP 8R2 1449 B 1 HETATM 9 C CAX 8R2 . . . E 3 40.653 -40.195 12.262 1 62.32 ? CAX 8R2 1449 B 1 HETATM 10 C CAL 8R2 . . . E 3 39.789 -39.183 12.494 1 60.7 ? CAL 8R2 1449 B 1 HETATM 11 C CAK 8R2 . . . E 3 40.203 -37.982 13.051 1 55.52 ? CAK 8R2 1449 B 1 HETATM 12 C CAV 8R2 . . . E 3 41.547 -37.855 13.363 1 57.02 ? CAV 8R2 1449 B 1 HETATM 13 O OAQ 8R2 . . . E 3 42.023 -36.709 13.915 1 53.68 ? OAQ 8R2 1449 B 1 HETATM 14 C CAU 8R2 . . . E 3 41.53 -36.362 15.136 1 52.56 ? CAU 8R2 1449 B 1 HETATM 15 C CAJ 8R2 . . . E 3 41.046 -37.26 16.084 1 54.84 ? CAJ 8R2 1449 B 1 HETATM 16 C CAH 8R2 . . . E 3 40.565 -36.819 17.321 1 56.57 ? CAH 8R2 1449 B 1 HETATM 17 C CAI 8R2 . . . E 3 41.54 -35.03 15.456 1 54.33 ? CAI 8R2 1449 B 1 HETATM 18 C CAG 8R2 . . . E 3 41.075 -34.593 16.688 1 58.56 ? CAG 8R2 1449 B 1 HETATM 19 C CAT 8R2 . . . E 3 40.563 -35.463 17.648 1 57.49 ? CAT 8R2 1449 B 1 HETATM 20 N NAO 8R2 . . . E 3 40.153 -34.895 18.803 1 58.79 ? NAO 8R2 1449 B 1 HETATM 21 C C 8R2 . . . E 3 40.101 -35.565 19.976 1 62.65 ? C 8R2 1449 B 1 HETATM 22 O O 8R2 . . . E 3 40.373 -36.755 20.139 1 77.3 ? O 8R2 1449 B 1 HETATM 23 C CA 8R2 . . . E 3 39.775 -34.715 21.213 1 60.78 ? CA 8R2 1449 B 1 HETATM 24 N N 8R2 . . . E 3 38.652 -35.29 22.007 1 56.65 ? N 8R2 1449 B 1 HETATM 25 C CB 8R2 . . . E 3 41.101 -34.688 21.968 1 54.58 ? CB 8R2 1449 B 1 HETATM 26 O OG 8R2 . . . E 3 41.12 -33.418 22.601 1 55.94 ? OG 8R2 1449 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #