data_5AJY
#
_model_server_result.job_id            '_T69KpRiv1n7Yn318Ht34Q' 
_model_server_result.datetime_utc      '2024-11-26 01:50:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ajy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1448}' 
#
_entry.id    5AJY 
#
_exptl.entry_id    5AJY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              361.397 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(4-{[3-(1-methyl-1H-pyrazol-4-yl)-1H-indol-5-yl]oxy}phenyl)glycinamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5AJY 
_cell.length_a            102.817 
_cell.length_b            102.817 
_cell.length_c            261.793 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AJY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_554 x,x-y,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 -43.632167 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H19 N5 O2' 
_chem_comp.formula_weight    361.397 
_chem_comp.id                87T 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(4-{[3-(1-methyl-1H-pyrazol-4-yl)-1H-indol-5-yl]oxy}phenyl)glycinamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C N 87T sing 1 n n 
N C1 87T sing 2 n y 
N N1 87T sing 3 n y 
O C9 87T sing 4 n n 
O C12 87T sing 5 n n 
C1 C2 87T doub 6 n y 
N1 C3 87T doub 7 n y 
O1 C18 87T doub 8 n n 
C2 C3 87T sing 9 n y 
C2 C4 87T sing 10 n n 
N2 C5 87T sing 11 n y 
N2 C6 87T sing 12 n y 
N3 C15 87T sing 13 n n 
N3 C18 87T sing 14 n n 
C4 C5 87T doub 15 n y 
C4 C7 87T sing 16 n y 
N4 C19 87T sing 17 n n 
C6 C7 87T doub 18 n y 
C6 C11 87T sing 19 n y 
C7 C8 87T sing 20 n y 
C8 C9 87T doub 21 n y 
C9 C10 87T sing 22 n y 
C10 C11 87T doub 23 n y 
C12 C13 87T doub 24 n y 
C12 C17 87T sing 25 n y 
C13 C14 87T sing 26 n y 
C14 C15 87T doub 27 n y 
C15 C16 87T sing 28 n y 
C16 C17 87T doub 29 n y 
C18 C19 87T sing 30 n n 
C H 87T sing 31 n n 
C HA 87T sing 32 n n 
C HB 87T sing 33 n n 
C1 H1 87T sing 34 n n 
N2 HN2 87T sing 35 n n 
C3 H3 87T sing 36 n n 
N3 HN3 87T sing 37 n n 
N4 HN4 87T sing 38 n n 
N4 HN4A 87T sing 39 n n 
C5 H5 87T sing 40 n n 
C8 H8 87T sing 41 n n 
C10 H10 87T sing 42 n n 
C11 H11 87T sing 43 n n 
C13 H13 87T sing 44 n n 
C14 H14 87T sing 45 n n 
C16 H16 87T sing 46 n n 
C17 H17 87T sing 47 n n 
C19 H19 87T sing 48 n n 
C19 H19A 87T sing 49 n n 
#
_atom_sites.entry_id                     5AJY 
_atom_sites.fract_transf_matrix[1][1]    0.009726 
_atom_sites.fract_transf_matrix[1][2]    0.005615 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011231 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00382 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PHS A 1 1445 1445 PHS PHS . 
C 3 PO4 A 1 1446 1446 PO4 PO4 . 
D 4 F6P A 1 1447 1447 F6P F6P . 
E 5 87T A 1 1448 1448 87T 87T . 
F 6 HOH A 1 2001 2001 HOH HOH . 
F 6 HOH A 2 2002 2002 HOH HOH . 
F 6 HOH A 3 2003 2003 HOH HOH . 
F 6 HOH A 4 2004 2004 HOH HOH . 
F 6 HOH A 5 2005 2005 HOH HOH . 
F 6 HOH A 6 2006 2006 HOH HOH . 
F 6 HOH A 7 2007 2007 HOH HOH . 
F 6 HOH A 8 2008 2008 HOH HOH . 
F 6 HOH A 9 2009 2009 HOH HOH . 
F 6 HOH A 10 2010 2010 HOH HOH . 
F 6 HOH A 11 2011 2011 HOH HOH . 
F 6 HOH A 12 2012 2012 HOH HOH . 
F 6 HOH A 13 2013 2013 HOH HOH . 
F 6 HOH A 14 2014 2014 HOH HOH . 
F 6 HOH A 15 2015 2015 HOH HOH . 
F 6 HOH A 16 2016 2016 HOH HOH . 
F 6 HOH A 17 2017 2017 HOH HOH . 
F 6 HOH A 18 2018 2018 HOH HOH . 
F 6 HOH A 19 2019 2019 HOH HOH . 
F 6 HOH A 20 2020 2020 HOH HOH . 
F 6 HOH A 21 2021 2021 HOH HOH . 
F 6 HOH A 22 2022 2022 HOH HOH . 
F 6 HOH A 23 2023 2023 HOH HOH . 
F 6 HOH A 24 2024 2024 HOH HOH . 
F 6 HOH A 25 2025 2025 HOH HOH . 
F 6 HOH A 26 2026 2026 HOH HOH . 
F 6 HOH A 27 2027 2027 HOH HOH . 
F 6 HOH A 28 2028 2028 HOH HOH . 
F 6 HOH A 29 2029 2029 HOH HOH . 
F 6 HOH A 30 2030 2030 HOH HOH . 
F 6 HOH A 31 2031 2031 HOH HOH . 
F 6 HOH A 32 2032 2032 HOH HOH . 
F 6 HOH A 33 2033 2033 HOH HOH . 
F 6 HOH A 34 2034 2034 HOH HOH . 
F 6 HOH A 35 2035 2035 HOH HOH . 
F 6 HOH A 36 2036 2036 HOH HOH . 
F 6 HOH A 37 2037 2037 HOH HOH . 
F 6 HOH A 38 2038 2038 HOH HOH . 
F 6 HOH A 39 2039 2039 HOH HOH . 
F 6 HOH A 40 2040 2040 HOH HOH . 
F 6 HOH A 41 2041 2041 HOH HOH . 
F 6 HOH A 42 2042 2042 HOH HOH . 
F 6 HOH A 43 2043 2043 HOH HOH . 
F 6 HOH A 44 2044 2044 HOH HOH . 
F 6 HOH A 45 2045 2045 HOH HOH . 
F 6 HOH A 46 2046 2046 HOH HOH . 
F 6 HOH A 47 2047 2047 HOH HOH . 
F 6 HOH A 48 2048 2048 HOH HOH . 
F 6 HOH A 49 2049 2049 HOH HOH . 
F 6 HOH A 50 2050 2050 HOH HOH . 
F 6 HOH A 51 2051 2051 HOH HOH . 
F 6 HOH A 52 2052 2052 HOH HOH . 
F 6 HOH A 53 2053 2053 HOH HOH . 
F 6 HOH A 54 2054 2054 HOH HOH . 
F 6 HOH A 55 2055 2055 HOH HOH . 
F 6 HOH A 56 2056 2056 HOH HOH . 
F 6 HOH A 57 2057 2057 HOH HOH . 
F 6 HOH A 58 2058 2058 HOH HOH . 
F 6 HOH A 59 2059 2059 HOH HOH . 
F 6 HOH A 60 2060 2060 HOH HOH . 
F 6 HOH A 61 2061 2061 HOH HOH . 
F 6 HOH A 62 2062 2062 HOH HOH . 
F 6 HOH A 63 2063 2063 HOH HOH . 
F 6 HOH A 64 2064 2064 HOH HOH . 
F 6 HOH A 65 2065 2065 HOH HOH . 
F 6 HOH A 66 2066 2066 HOH HOH . 
F 6 HOH A 67 2067 2067 HOH HOH . 
F 6 HOH A 68 2068 2068 HOH HOH . 
F 6 HOH A 69 2069 2069 HOH HOH . 
F 6 HOH A 70 2070 2070 HOH HOH . 
F 6 HOH A 71 2071 2071 HOH HOH . 
F 6 HOH A 72 2072 2072 HOH HOH . 
F 6 HOH A 73 2073 2073 HOH HOH . 
F 6 HOH A 74 2074 2074 HOH HOH . 
F 6 HOH A 75 2075 2075 HOH HOH . 
F 6 HOH A 76 2076 2076 HOH HOH . 
F 6 HOH A 77 2077 2077 HOH HOH . 
F 6 HOH A 78 2078 2078 HOH HOH . 
F 6 HOH A 79 2079 2079 HOH HOH . 
F 6 HOH A 80 2080 2080 HOH HOH . 
F 6 HOH A 81 2081 2081 HOH HOH . 
F 6 HOH A 82 2082 2082 HOH HOH . 
F 6 HOH A 83 2083 2083 HOH HOH . 
F 6 HOH A 84 2084 2084 HOH HOH . 
F 6 HOH A 85 2085 2085 HOH HOH . 
F 6 HOH A 86 2086 2086 HOH HOH . 
F 6 HOH A 87 2087 2087 HOH HOH . 
F 6 HOH A 88 2088 2088 HOH HOH . 
F 6 HOH A 89 2089 2089 HOH HOH . 
F 6 HOH A 90 2090 2090 HOH HOH . 
F 6 HOH A 91 2091 2091 HOH HOH . 
F 6 HOH A 92 2092 2092 HOH HOH . 
F 6 HOH A 93 2093 2093 HOH HOH . 
F 6 HOH A 94 2094 2094 HOH HOH . 
F 6 HOH A 95 2095 2095 HOH HOH . 
F 6 HOH A 96 2096 2096 HOH HOH . 
F 6 HOH A 97 2097 2097 HOH HOH . 
F 6 HOH A 98 2098 2098 HOH HOH . 
F 6 HOH A 99 2099 2099 HOH HOH . 
F 6 HOH A 100 2100 2100 HOH HOH . 
F 6 HOH A 101 2101 2101 HOH HOH . 
F 6 HOH A 102 2102 2102 HOH HOH . 
F 6 HOH A 103 2103 2103 HOH HOH . 
F 6 HOH A 104 2104 2104 HOH HOH . 
F 6 HOH A 105 2105 2105 HOH HOH . 
F 6 HOH A 106 2106 2106 HOH HOH . 
F 6 HOH A 107 2107 2107 HOH HOH . 
F 6 HOH A 108 2108 2108 HOH HOH . 
F 6 HOH A 109 2109 2109 HOH HOH . 
F 6 HOH A 110 2110 2110 HOH HOH . 
F 6 HOH A 111 2111 2111 HOH HOH . 
F 6 HOH A 112 2112 2112 HOH HOH . 
F 6 HOH A 113 2113 2113 HOH HOH . 
F 6 HOH A 114 2114 2114 HOH HOH . 
F 6 HOH A 115 2115 2115 HOH HOH . 
F 6 HOH A 116 2116 2116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C 87T . . . E 5 -35.897 -42.539 -12.399 1 86.23 ? C 87T 1448 A 1 
HETATM 2 N N 87T . . . E 5 -37.275 -42.458 -11.924 1 86.71 ? N 87T 1448 A 1 
HETATM 3 O O 87T . . . E 5 -41.245 -37.131 -13.322 1 60.77 ? O 87T 1448 A 1 
HETATM 4 C C1 87T . . . E 5 -38.369 -42.17 -12.64 1 83.7 ? C1 87T 1448 A 1 
HETATM 5 N N1 87T . . . E 5 -37.559 -42.706 -10.624 1 87.77 ? N1 87T 1448 A 1 
HETATM 6 O O1 87T . . . E 5 -40.082 -36.903 -19.759 1 58.5 ? O1 87T 1448 A 1 
HETATM 7 C C2 87T . . . E 5 -39.445 -42.238 -11.775 1 79.81 ? C2 87T 1448 A 1 
HETATM 8 N N2 87T . . . E 5 -43.081 -42.2 -12.272 1 63.57 ? N2 87T 1448 A 1 
HETATM 9 C C3 87T . . . E 5 -38.872 -42.556 -10.53 1 84.62 ? C3 87T 1448 A 1 
HETATM 10 N N3 87T . . . E 5 -40.836 -35.136 -18.521 1 56.8 ? N3 87T 1448 A 1 
HETATM 11 C C4 87T . . . E 5 -40.858 -41.944 -12.059 1 70.12 ? C4 87T 1448 A 1 
HETATM 12 N N4 87T . . . E 5 -39.612 -35.224 -21.913 1 59.37 ? N4 87T 1448 A 1 
HETATM 13 C C5 87T . . . E 5 -41.908 -42.825 -11.95 1 65.7 ? C5 87T 1448 A 1 
HETATM 14 C C6 87T . . . E 5 -42.82 -40.885 -12.582 1 63.17 ? C6 87T 1448 A 1 
HETATM 15 C C7 87T . . . E 5 -41.435 -40.676 -12.445 1 64.89 ? C7 87T 1448 A 1 
HETATM 16 C C8 87T . . . E 5 -40.913 -39.41 -12.702 1 62.58 ? C8 87T 1448 A 1 
HETATM 17 C C9 87T . . . E 5 -41.781 -38.387 -13.068 1 61.78 ? C9 87T 1448 A 1 
HETATM 18 C C10 87T . . . E 5 -43.156 -38.593 -13.169 1 62.04 ? C10 87T 1448 A 1 
HETATM 19 C C11 87T . . . E 5 -43.683 -39.856 -12.958 1 62.39 ? C11 87T 1448 A 1 
HETATM 20 C C12 87T . . . E 5 -41.164 -36.676 -14.635 1 58.89 ? C12 87T 1448 A 1 
HETATM 21 C C13 87T . . . E 5 -41 -37.558 -15.697 1 59.15 ? C13 87T 1448 A 1 
HETATM 22 C C14 87T . . . E 5 -40.911 -37.067 -16.987 1 58.44 ? C14 87T 1448 A 1 
HETATM 23 C C15 87T . . . E 5 -40.927 -35.693 -17.22 1 57.25 ? C15 87T 1448 A 1 
HETATM 24 C C16 87T . . . E 5 -41.103 -34.821 -16.149 1 56.25 ? C16 87T 1448 A 1 
HETATM 25 C C17 87T . . . E 5 -41.203 -35.309 -14.858 1 55.72 ? C17 87T 1448 A 1 
HETATM 26 C C18 87T . . . E 5 -40.499 -35.748 -19.678 1 57.21 ? C18 87T 1448 A 1 
HETATM 27 C C19 87T . . . E 5 -40.648 -34.925 -20.975 1 57.06 ? C19 87T 1448 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#