data_5AK2
#
_model_server_result.job_id            DDkJE8wq3weScSqCD1dH5Q 
_model_server_result.datetime_utc      '2025-05-19 14:57:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ak2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1546}' 
#
_entry.id    5AK2 
#
_exptl.entry_id    5AK2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              430.424 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(E)-3-[4-[[3-(4-fluoranyl-2-methyl-phenyl)-7-oxidanyl-2-oxidanylidene-chromen-4-yl]methyl]phenyl]prop-2-enoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.45 
_cell.angle_gamma         90 
_cell.entry_id            5AK2 
_cell.length_a            106.07 
_cell.length_b            51.29 
_cell.length_c            83.31 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AK2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C26 H19 F O5' 
_chem_comp.formula_weight    430.424 
_chem_comp.id                85Z 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(E)-3-[4-[[3-(4-fluoranyl-2-methyl-phenyl)-7-oxidanyl-2-oxidanylidene-chromen-4-yl]methyl]phenyl]prop-2-enoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 85Z sing 1 n n 
C2 C3 85Z sing 2 n y 
C2 C7 85Z doub 3 n y 
C3 C4 85Z doub 4 n y 
C4 C5 85Z sing 5 n y 
C4 F32 85Z sing 6 n n 
C5 C6 85Z doub 7 n y 
C6 C7 85Z sing 8 n y 
C7 C8 85Z sing 9 n n 
C8 C9 85Z doub 10 n n 
C8 C17 85Z sing 11 n n 
C9 C10 85Z sing 12 n n 
C9 C20 85Z sing 13 n n 
C10 C11 85Z sing 14 n y 
C10 C15 85Z doub 15 n y 
C11 C12 85Z doub 16 n y 
C12 C13 85Z sing 17 n y 
C13 C14 85Z doub 18 n y 
C13 O19 85Z sing 19 n n 
C14 C15 85Z sing 20 n y 
C15 O16 85Z sing 21 n n 
O16 C17 85Z sing 22 n n 
C17 O18 85Z doub 23 n n 
C20 C21 85Z sing 24 n n 
C21 C22 85Z sing 25 n y 
C21 C26 85Z doub 26 n y 
C22 C23 85Z doub 27 n y 
C23 C24 85Z sing 28 n y 
C24 C25 85Z doub 29 n y 
C24 C27 85Z sing 30 n n 
C25 C26 85Z sing 31 n y 
C27 C28 85Z doub 32 e n 
C28 C29 85Z sing 33 n n 
C29 O30 85Z doub 34 n n 
C29 O31 85Z sing 35 n n 
C1 H11C 85Z sing 36 n n 
C1 H12C 85Z sing 37 n n 
C1 H13C 85Z sing 38 n n 
C3 H3 85Z sing 39 n n 
C5 H5 85Z sing 40 n n 
C6 H6 85Z sing 41 n n 
C20 H201 85Z sing 42 n n 
C20 H202 85Z sing 43 n n 
C11 H11 85Z sing 44 n n 
C12 H12 85Z sing 45 n n 
C14 H14 85Z sing 46 n n 
O19 H19 85Z sing 47 n n 
C22 H22 85Z sing 48 n n 
C26 H26 85Z sing 49 n n 
C23 H23 85Z sing 50 n n 
C25 H25 85Z sing 51 n n 
C27 H27 85Z sing 52 n n 
C28 H28 85Z sing 53 n n 
O31 H31 85Z sing 54 n n 
#
_atom_sites.entry_id                     5AK2 
_atom_sites.fract_transf_matrix[1][1]    0.009428 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000239 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019497 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012007 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 85Z A 1 1553 1553 85Z 85Z . 
D 2 85Z B 1 1546 1546 85Z 85Z . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
E 3 HOH A 3 2003 2003 HOH HOH . 
E 3 HOH A 4 2004 2004 HOH HOH . 
E 3 HOH A 5 2005 2005 HOH HOH . 
E 3 HOH A 6 2006 2006 HOH HOH . 
E 3 HOH A 7 2007 2007 HOH HOH . 
E 3 HOH A 8 2008 2008 HOH HOH . 
E 3 HOH A 9 2009 2009 HOH HOH . 
E 3 HOH A 10 2010 2010 HOH HOH . 
E 3 HOH A 11 2011 2011 HOH HOH . 
E 3 HOH A 12 2012 2012 HOH HOH . 
E 3 HOH A 13 2013 2013 HOH HOH . 
E 3 HOH A 14 2014 2014 HOH HOH . 
E 3 HOH A 15 2015 2015 HOH HOH . 
E 3 HOH A 16 2016 2016 HOH HOH . 
E 3 HOH A 17 2017 2017 HOH HOH . 
E 3 HOH A 18 2018 2018 HOH HOH . 
E 3 HOH A 19 2019 2019 HOH HOH . 
E 3 HOH A 20 2020 2020 HOH HOH . 
E 3 HOH A 21 2021 2021 HOH HOH . 
E 3 HOH A 22 2022 2022 HOH HOH . 
E 3 HOH A 23 2023 2023 HOH HOH . 
E 3 HOH A 24 2024 2024 HOH HOH . 
E 3 HOH A 25 2025 2025 HOH HOH . 
E 3 HOH A 26 2026 2026 HOH HOH . 
E 3 HOH A 27 2027 2027 HOH HOH . 
E 3 HOH A 28 2028 2028 HOH HOH . 
E 3 HOH A 29 2029 2029 HOH HOH . 
E 3 HOH A 30 2030 2030 HOH HOH . 
E 3 HOH A 31 2031 2031 HOH HOH . 
E 3 HOH A 32 2032 2032 HOH HOH . 
E 3 HOH A 33 2033 2033 HOH HOH . 
E 3 HOH A 34 2034 2034 HOH HOH . 
E 3 HOH A 35 2035 2035 HOH HOH . 
E 3 HOH A 36 2036 2036 HOH HOH . 
E 3 HOH A 37 2037 2037 HOH HOH . 
E 3 HOH A 38 2038 2038 HOH HOH . 
E 3 HOH A 39 2039 2039 HOH HOH . 
E 3 HOH A 40 2040 2040 HOH HOH . 
E 3 HOH A 41 2041 2041 HOH HOH . 
E 3 HOH A 42 2042 2042 HOH HOH . 
E 3 HOH A 43 2043 2043 HOH HOH . 
E 3 HOH A 44 2044 2044 HOH HOH . 
E 3 HOH A 45 2045 2045 HOH HOH . 
E 3 HOH A 46 2046 2046 HOH HOH . 
E 3 HOH A 47 2047 2047 HOH HOH . 
E 3 HOH A 48 2048 2048 HOH HOH . 
E 3 HOH A 49 2049 2049 HOH HOH . 
E 3 HOH A 50 2050 2050 HOH HOH . 
E 3 HOH A 51 2051 2051 HOH HOH . 
E 3 HOH A 52 2052 2052 HOH HOH . 
E 3 HOH A 53 2053 2053 HOH HOH . 
E 3 HOH A 54 2054 2054 HOH HOH . 
E 3 HOH A 55 2055 2055 HOH HOH . 
E 3 HOH A 56 2056 2056 HOH HOH . 
E 3 HOH A 57 2057 2057 HOH HOH . 
E 3 HOH A 58 2058 2058 HOH HOH . 
E 3 HOH A 59 2059 2059 HOH HOH . 
E 3 HOH A 60 2060 2060 HOH HOH . 
E 3 HOH A 61 2061 2061 HOH HOH . 
E 3 HOH A 62 2062 2062 HOH HOH . 
E 3 HOH A 63 2063 2063 HOH HOH . 
E 3 HOH A 64 2064 2064 HOH HOH . 
E 3 HOH A 65 2065 2065 HOH HOH . 
E 3 HOH A 66 2066 2066 HOH HOH . 
E 3 HOH A 67 2067 2067 HOH HOH . 
E 3 HOH A 68 2068 2068 HOH HOH . 
E 3 HOH A 69 2069 2069 HOH HOH . 
E 3 HOH A 70 2070 2070 HOH HOH . 
E 3 HOH A 71 2071 2071 HOH HOH . 
E 3 HOH A 72 2072 2072 HOH HOH . 
E 3 HOH A 73 2073 2073 HOH HOH . 
E 3 HOH A 74 2074 2074 HOH HOH . 
E 3 HOH A 75 2075 2075 HOH HOH . 
E 3 HOH A 76 2076 2076 HOH HOH . 
E 3 HOH A 77 2077 2077 HOH HOH . 
E 3 HOH A 78 2078 2078 HOH HOH . 
E 3 HOH A 79 2079 2079 HOH HOH . 
E 3 HOH A 80 2080 2080 HOH HOH . 
E 3 HOH A 81 2081 2081 HOH HOH . 
E 3 HOH A 82 2082 2082 HOH HOH . 
E 3 HOH A 83 2083 2083 HOH HOH . 
E 3 HOH A 84 2084 2084 HOH HOH . 
E 3 HOH A 85 2085 2085 HOH HOH . 
E 3 HOH A 86 2086 2086 HOH HOH . 
E 3 HOH A 87 2087 2087 HOH HOH . 
E 3 HOH A 88 2088 2088 HOH HOH . 
E 3 HOH A 89 2089 2089 HOH HOH . 
F 3 HOH B 1 2001 2001 HOH HOH . 
F 3 HOH B 2 2002 2002 HOH HOH . 
F 3 HOH B 3 2003 2003 HOH HOH . 
F 3 HOH B 4 2004 2004 HOH HOH . 
F 3 HOH B 5 2005 2005 HOH HOH . 
F 3 HOH B 6 2006 2006 HOH HOH . 
F 3 HOH B 7 2007 2007 HOH HOH . 
F 3 HOH B 8 2008 2008 HOH HOH . 
F 3 HOH B 9 2009 2009 HOH HOH . 
F 3 HOH B 10 2010 2010 HOH HOH . 
F 3 HOH B 11 2011 2011 HOH HOH . 
F 3 HOH B 12 2012 2012 HOH HOH . 
F 3 HOH B 13 2013 2013 HOH HOH . 
F 3 HOH B 14 2014 2014 HOH HOH . 
F 3 HOH B 15 2015 2015 HOH HOH . 
F 3 HOH B 16 2016 2016 HOH HOH . 
F 3 HOH B 17 2017 2017 HOH HOH . 
F 3 HOH B 18 2018 2018 HOH HOH . 
F 3 HOH B 19 2019 2019 HOH HOH . 
F 3 HOH B 20 2020 2020 HOH HOH . 
F 3 HOH B 21 2021 2021 HOH HOH . 
F 3 HOH B 22 2022 2022 HOH HOH . 
F 3 HOH B 23 2023 2023 HOH HOH . 
F 3 HOH B 24 2024 2024 HOH HOH . 
F 3 HOH B 25 2025 2025 HOH HOH . 
F 3 HOH B 26 2026 2026 HOH HOH . 
F 3 HOH B 27 2027 2027 HOH HOH . 
F 3 HOH B 28 2028 2028 HOH HOH . 
F 3 HOH B 29 2029 2029 HOH HOH . 
F 3 HOH B 30 2030 2030 HOH HOH . 
F 3 HOH B 31 2031 2031 HOH HOH . 
F 3 HOH B 32 2032 2032 HOH HOH . 
F 3 HOH B 33 2033 2033 HOH HOH . 
F 3 HOH B 34 2034 2034 HOH HOH . 
F 3 HOH B 35 2035 2035 HOH HOH . 
F 3 HOH B 36 2036 2036 HOH HOH . 
F 3 HOH B 37 2037 2037 HOH HOH . 
F 3 HOH B 38 2038 2038 HOH HOH . 
F 3 HOH B 39 2039 2039 HOH HOH . 
F 3 HOH B 40 2040 2040 HOH HOH . 
F 3 HOH B 41 2041 2041 HOH HOH . 
F 3 HOH B 42 2042 2042 HOH HOH . 
F 3 HOH B 43 2043 2043 HOH HOH . 
F 3 HOH B 44 2044 2044 HOH HOH . 
F 3 HOH B 45 2045 2045 HOH HOH . 
F 3 HOH B 46 2046 2046 HOH HOH . 
F 3 HOH B 47 2047 2047 HOH HOH . 
F 3 HOH B 48 2048 2048 HOH HOH . 
F 3 HOH B 49 2049 2049 HOH HOH . 
F 3 HOH B 50 2050 2050 HOH HOH . 
F 3 HOH B 51 2051 2051 HOH HOH . 
F 3 HOH B 52 2052 2052 HOH HOH . 
F 3 HOH B 53 2053 2053 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 85Z . . . D 2 58.514 6.523 20.6 1 25.15 ? C1 85Z 1546 B 1 
HETATM 2 C C2 85Z . . . D 2 57.94 6.433 19.193 1 26.54 ? C2 85Z 1546 B 1 
HETATM 3 C C3 85Z . . . D 2 57.409 7.576 18.6 1 25.76 ? C3 85Z 1546 B 1 
HETATM 4 C C4 85Z . . . D 2 56.886 7.498 17.335 1 26.89 ? C4 85Z 1546 B 1 
HETATM 5 C C5 85Z . . . D 2 56.845 6.348 16.604 1 26.1 ? C5 85Z 1546 B 1 
HETATM 6 C C6 85Z . . . D 2 57.352 5.204 17.186 1 26.7 ? C6 85Z 1546 B 1 
HETATM 7 C C7 85Z . . . D 2 57.893 5.236 18.47 1 26.28 ? C7 85Z 1546 B 1 
HETATM 8 C C8 85Z . . . D 2 58.431 3.978 19.002 1 27.13 ? C8 85Z 1546 B 1 
HETATM 9 C C9 85Z . . . D 2 59.604 3.481 18.545 1 26.34 ? C9 85Z 1546 B 1 
HETATM 10 C C10 85Z . . . D 2 60.054 2.191 19.063 1 25.37 ? C10 85Z 1546 B 1 
HETATM 11 C C11 85Z . . . D 2 61.251 1.577 18.699 1 25.35 ? C11 85Z 1546 B 1 
HETATM 12 C C12 85Z . . . D 2 61.601 0.345 19.224 1 25.21 ? C12 85Z 1546 B 1 
HETATM 13 C C13 85Z . . . D 2 60.76 -0.291 20.126 1 25.53 ? C13 85Z 1546 B 1 
HETATM 14 C C14 85Z . . . D 2 59.558 0.289 20.503 1 25.67 ? C14 85Z 1546 B 1 
HETATM 15 C C15 85Z . . . D 2 59.23 1.515 19.964 1 26.14 ? C15 85Z 1546 B 1 
HETATM 16 O O16 85Z . . . D 2 58.033 2.041 20.371 1 27.66 ? O16 85Z 1546 B 1 
HETATM 17 C C17 85Z . . . D 2 57.589 3.249 19.923 1 27.58 ? C17 85Z 1546 B 1 
HETATM 18 O O18 85Z . . . D 2 56.532 3.624 20.361 1 30.4 ? O18 85Z 1546 B 1 
HETATM 19 O O19 85Z . . . D 2 61.074 -1.506 20.669 1 23.33 ? O19 85Z 1546 B 1 
HETATM 20 C C20 85Z . . . D 2 60.521 4.247 17.627 1 25.83 ? C20 85Z 1546 B 1 
HETATM 21 C C21 85Z . . . D 2 60.504 3.946 16.155 1 25.66 ? C21 85Z 1546 B 1 
HETATM 22 C C22 85Z . . . D 2 59.873 2.831 15.632 1 25.71 ? C22 85Z 1546 B 1 
HETATM 23 C C23 85Z . . . D 2 59.915 2.571 14.273 1 27.48 ? C23 85Z 1546 B 1 
HETATM 24 C C24 85Z . . . D 2 60.592 3.416 13.397 1 26.83 ? C24 85Z 1546 B 1 
HETATM 25 C C25 85Z . . . D 2 61.228 4.528 13.937 1 25.84 ? C25 85Z 1546 B 1 
HETATM 26 C C26 85Z . . . D 2 61.185 4.784 15.293 1 25.6 ? C26 85Z 1546 B 1 
HETATM 27 C C27 85Z . . . D 2 60.669 3.17 11.957 1 28.5 ? C27 85Z 1546 B 1 
HETATM 28 C C28 85Z . . . D 2 60.945 4.069 11.023 1 29.41 ? C28 85Z 1546 B 1 
HETATM 29 C C29 85Z . . . D 2 61.032 3.684 9.595 1 30.87 ? C29 85Z 1546 B 1 
HETATM 30 O O30 85Z . . . D 2 61.443 4.491 8.762 1 29.61 ? O30 85Z 1546 B 1 
HETATM 31 O O31 85Z . . . D 2 60.69 2.465 9.296 1 31.01 ? O31 85Z 1546 B 1 
HETATM 32 F F32 85Z . . . D 2 56.37 8.621 16.77 1 28.73 ? F32 85Z 1546 B 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           32 
#