data_5ALQ # _model_server_result.job_id sFh2Gu6SPQhdiyvM2eSjIg _model_server_result.datetime_utc '2024-11-05 00:40:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5alq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1550}' # _entry.id 5ALQ # _exptl.entry_id 5ALQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.29 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(3-PHENYL-1H-PYRAZOL-5-YL)CYCLOPENTANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ALQ _cell.length_a 92.726 _cell.length_b 92.726 _cell.length_c 244.08 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ALQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 46.363 80.303072 40.68 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H16 N2 O' _chem_comp.formula_weight 228.29 _chem_comp.id GZP _chem_comp.mon_nstd_flag . _chem_comp.name 1-(3-PHENYL-1H-PYRAZOL-5-YL)CYCLOPENTANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GZP sing 129 n y C1 C6 GZP doub 130 n y C2 C3 GZP doub 131 n y C6 C5 GZP sing 132 n y C3 C4 GZP sing 133 n y C5 C4 GZP doub 134 n y C8 C7 GZP doub 135 n y C8 C9 GZP sing 136 n y C4 C7 GZP sing 137 n n C7 N11 GZP sing 138 n y C9 C12 GZP sing 139 n n C9 N10 GZP doub 140 n y C14 C15 GZP sing 141 n n C14 C13 GZP sing 142 n n C15 C16 GZP sing 143 n n C13 C12 GZP sing 144 n n C16 C12 GZP sing 145 n n C12 O17 GZP sing 146 n n N11 N10 GZP sing 147 n y C1 H1 GZP sing 148 n n C2 H2 GZP sing 149 n n C6 H6 GZP sing 150 n n C3 H3 GZP sing 151 n n C5 H5 GZP sing 152 n n C8 H8 GZP sing 153 n n N11 H11 GZP sing 154 n n C14 H141 GZP sing 155 n n C14 H142 GZP sing 156 n n C15 H151 GZP sing 157 n n C15 H152 GZP sing 158 n n C13 H131 GZP sing 159 n n C13 H132 GZP sing 160 n n C16 H161 GZP sing 161 n n C16 H162 GZP sing 162 n n O17 H17 GZP sing 163 n n # _atom_sites.entry_id 5ALQ _atom_sites.fract_transf_matrix[1][1] 0.010784 _atom_sites.fract_transf_matrix[1][2] 0.006226 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1548 1548 SO4 SO4 . C 2 SO4 A 1 1549 1549 SO4 SO4 . D 3 GZP A 1 1550 1550 GZP GZP . E 4 HOH A 1 2001 2001 HOH HOH . E 4 HOH A 2 2002 2002 HOH HOH . E 4 HOH A 3 2003 2003 HOH HOH . E 4 HOH A 4 2004 2004 HOH HOH . E 4 HOH A 5 2005 2005 HOH HOH . E 4 HOH A 6 2006 2006 HOH HOH . E 4 HOH A 7 2007 2007 HOH HOH . E 4 HOH A 8 2008 2008 HOH HOH . E 4 HOH A 9 2009 2009 HOH HOH . E 4 HOH A 10 2010 2010 HOH HOH . E 4 HOH A 11 2011 2011 HOH HOH . E 4 HOH A 12 2012 2012 HOH HOH . E 4 HOH A 13 2013 2013 HOH HOH . E 4 HOH A 14 2014 2014 HOH HOH . E 4 HOH A 15 2015 2015 HOH HOH . E 4 HOH A 16 2016 2016 HOH HOH . E 4 HOH A 17 2017 2017 HOH HOH . E 4 HOH A 18 2018 2018 HOH HOH . E 4 HOH A 19 2019 2019 HOH HOH . E 4 HOH A 20 2020 2020 HOH HOH . E 4 HOH A 21 2021 2021 HOH HOH . E 4 HOH A 22 2022 2022 HOH HOH . E 4 HOH A 23 2023 2023 HOH HOH . E 4 HOH A 24 2024 2024 HOH HOH . E 4 HOH A 25 2025 2025 HOH HOH . E 4 HOH A 26 2026 2026 HOH HOH . E 4 HOH A 27 2028 2028 HOH HOH . E 4 HOH A 28 2029 2029 HOH HOH . E 4 HOH A 29 2030 2030 HOH HOH . E 4 HOH A 30 2031 2031 HOH HOH . E 4 HOH A 31 2032 2032 HOH HOH . E 4 HOH A 32 2033 2033 HOH HOH . E 4 HOH A 33 2034 2034 HOH HOH . E 4 HOH A 34 2035 2035 HOH HOH . E 4 HOH A 35 2036 2036 HOH HOH . E 4 HOH A 36 2037 2037 HOH HOH . E 4 HOH A 37 2038 2038 HOH HOH . E 4 HOH A 38 2039 2039 HOH HOH . E 4 HOH A 39 2040 2040 HOH HOH . E 4 HOH A 40 2041 2041 HOH HOH . E 4 HOH A 41 2042 2042 HOH HOH . E 4 HOH A 42 2043 2043 HOH HOH . E 4 HOH A 43 2044 2044 HOH HOH . E 4 HOH A 44 2045 2045 HOH HOH . E 4 HOH A 45 2046 2046 HOH HOH . E 4 HOH A 46 2047 2047 HOH HOH . E 4 HOH A 47 2048 2048 HOH HOH . E 4 HOH A 48 2049 2049 HOH HOH . E 4 HOH A 49 2050 2050 HOH HOH . E 4 HOH A 50 2052 2052 HOH HOH . E 4 HOH A 51 2053 2053 HOH HOH . E 4 HOH A 52 2054 2054 HOH HOH . E 4 HOH A 53 2055 2055 HOH HOH . E 4 HOH A 54 2056 2056 HOH HOH . E 4 HOH A 55 2057 2057 HOH HOH . E 4 HOH A 56 2058 2058 HOH HOH . E 4 HOH A 57 2059 2059 HOH HOH . E 4 HOH A 58 2060 2060 HOH HOH . E 4 HOH A 59 2061 2061 HOH HOH . E 4 HOH A 60 2062 2062 HOH HOH . E 4 HOH A 61 2063 2063 HOH HOH . E 4 HOH A 62 2064 2064 HOH HOH . E 4 HOH A 63 2065 2065 HOH HOH . E 4 HOH A 64 2067 2067 HOH HOH . E 4 HOH A 65 2068 2068 HOH HOH . E 4 HOH A 66 2069 2069 HOH HOH . E 4 HOH A 67 2070 2070 HOH HOH . E 4 HOH A 68 2071 2071 HOH HOH . E 4 HOH A 69 2072 2072 HOH HOH . E 4 HOH A 70 2073 2073 HOH HOH . E 4 HOH A 71 2074 2074 HOH HOH . E 4 HOH A 72 2075 2075 HOH HOH . E 4 HOH A 73 2076 2076 HOH HOH . E 4 HOH A 74 2077 2077 HOH HOH . E 4 HOH A 75 2078 2078 HOH HOH . E 4 HOH A 76 2079 2079 HOH HOH . E 4 HOH A 77 2081 2081 HOH HOH . E 4 HOH A 78 2082 2082 HOH HOH . E 4 HOH A 79 2083 2083 HOH HOH . E 4 HOH A 80 2084 2084 HOH HOH . E 4 HOH A 81 2085 2085 HOH HOH . E 4 HOH A 82 2080 2080 HOH HOH . E 4 HOH A 83 2066 2066 HOH HOH . E 4 HOH A 84 2051 2051 HOH HOH . E 4 HOH A 85 2027 2027 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GZP . A . D 3 13.628 13.249 19.567 0.5 52.01 ? C1 GZP 1550 A 1 HETATM 2 C C1 GZP . B . D 3 20.515 9.243 12.405 0.5 51.62 ? C1 GZP 1550 A 1 HETATM 3 C C2 GZP . A . D 3 14.524 12.314 20.044 0.5 52.7 ? C2 GZP 1550 A 1 HETATM 4 C C2 GZP . B . D 3 20.118 10.56 12.308 0.5 51.42 ? C2 GZP 1550 A 1 HETATM 5 C C6 GZP . A . D 3 13.565 13.518 18.215 0.5 52.43 ? C6 GZP 1550 A 1 HETATM 6 C C6 GZP . B . D 3 19.929 8.401 13.327 0.5 51.84 ? C6 GZP 1550 A 1 HETATM 7 C C3 GZP . A . D 3 15.354 11.65 19.165 0.5 53.68 ? C3 GZP 1550 A 1 HETATM 8 C C3 GZP . B . D 3 19.129 11.034 13.144 0.5 52.05 ? C3 GZP 1550 A 1 HETATM 9 C C5 GZP . A . D 3 14.397 12.855 17.337 0.5 53.43 ? C5 GZP 1550 A 1 HETATM 10 C C5 GZP . B . D 3 18.934 8.881 14.152 0.5 52.46 ? C5 GZP 1550 A 1 HETATM 11 C C8 GZP . A . D 3 16.776 11.669 15.712 0.5 57.97 ? C8 GZP 1550 A 1 HETATM 12 C C8 GZP . B . D 3 17.118 10.381 16.249 0.5 55.71 ? C8 GZP 1550 A 1 HETATM 13 C C4 GZP . A . D 3 15.291 11.915 17.809 0.5 54.68 ? C4 GZP 1550 A 1 HETATM 14 C C4 GZP . B . D 3 18.536 10.201 14.074 0.5 53.19 ? C4 GZP 1550 A 1 HETATM 15 C C7 GZP . A . D 3 16.179 11.217 16.916 0.5 56.57 ? C7 GZP 1550 A 1 HETATM 16 C C7 GZP . B . D 3 17.47 10.699 14.909 0.5 54.82 ? C7 GZP 1550 A 1 HETATM 17 C C9 GZP . A . D 3 17.595 10.666 15.264 0.5 59.97 ? C9 GZP 1550 A 1 HETATM 18 C C9 GZP . B . D 3 15.993 11.118 16.541 0.5 56.09 ? C9 GZP 1550 A 1 HETATM 19 C C14 GZP . A . D 3 18.954 10.197 11.792 0.5 63.03 ? C14 GZP 1550 A 1 HETATM 20 C C14 GZP . B . D 3 13.857 13.026 18.847 0.5 56.75 ? C14 GZP 1550 A 1 HETATM 21 C C15 GZP . A . D 3 19.671 9.105 12.552 0.5 62.93 ? C15 GZP 1550 A 1 HETATM 22 C C15 GZP . B . D 3 14.845 12.434 19.814 0.5 56.84 ? C15 GZP 1550 A 1 HETATM 23 C C13 GZP . A . D 3 17.951 10.815 12.742 0.5 62.46 ? C13 GZP 1550 A 1 HETATM 24 C C13 GZP . B . D 3 14.027 12.272 17.555 0.5 57.42 ? C13 GZP 1550 A 1 HETATM 25 C C16 GZP . A . D 3 19.278 9.251 14.002 0.5 62.59 ? C16 GZP 1550 A 1 HETATM 26 C C16 GZP . B . D 3 15.792 11.561 19.022 0.5 57.04 ? C16 GZP 1550 A 1 HETATM 27 C C12 GZP . A . D 3 18.519 10.555 14.111 0.5 62.05 ? C12 GZP 1550 A 1 HETATM 28 C C12 GZP . B . D 3 15.113 11.233 17.727 0.5 57.55 ? C12 GZP 1550 A 1 HETATM 29 N N11 GZP . A . D 3 16.615 9.995 17.216 0.5 57.94 ? N11 GZP 1550 A 1 HETATM 30 N N11 GZP . B . D 3 16.6 11.567 14.395 0.5 55.31 ? N11 GZP 1550 A 1 HETATM 31 N N10 GZP . A . D 3 17.454 9.699 16.213 0.5 59.73 ? N10 GZP 1550 A 1 HETATM 32 N N10 GZP . B . D 3 15.734 11.799 15.39 0.5 55.79 ? N10 GZP 1550 A 1 HETATM 33 O O17 GZP . A . D 3 19.451 11.585 14.373 0.5 63.15 ? O17 GZP 1550 A 1 HETATM 34 O O17 GZP . B . D 3 14.517 9.959 17.88 0.5 59.42 ? O17 GZP 1550 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #