data_5AQQ
#
_model_server_result.job_id            9oer_jcylM9KFEnQ2qxa0w 
_model_server_result.datetime_utc      '2024-11-22 05:49:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5aqq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1383}' 
#
_entry.id    5AQQ 
#
_exptl.entry_id    5AQQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          123.75 
_cell.angle_gamma         90 
_cell.entry_id            5AQQ 
_cell.length_a            233.433 
_cell.length_b            41.332 
_cell.length_c            205.513 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AQQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
E,F,O,P,U,V 1 1 
A,B,G,H,I,J,K,Q,R 2 1 
C,D,L,M,N,S,T 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 M N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 56 B CYS 201 1_555 B SG CYS 114 B CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 F SG CYS 56 F CYS 201 1_555 F SG CYS 114 F CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 105 n n 
S C1 DMS sing 106 n n 
S C2 DMS sing 107 n n 
C1 H11 DMS sing 108 n n 
C1 H12 DMS sing 109 n n 
C1 H13 DMS sing 110 n n 
C2 H21 DMS sing 111 n n 
C2 H22 DMS sing 112 n n 
C2 H23 DMS sing 113 n n 
#
_atom_sites.entry_id                     5AQQ 
_atom_sites.fract_transf_matrix[1][1]    0.004284 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002862 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024194 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 BBW A 1 1382 1382 BBW BBW . 
H 4 DMS A 1 1383 1383 DMS DMS . 
I 5 GOL A 1 1384 1384 GOL GOL . 
J 6 TRS A 1 1385 1385 TRS TRS . 
K 5 GOL B 1 1261 1261 GOL GOL . 
L 3 BBW C 1 1382 1382 BBW BBW . 
M 4 DMS C 1 1383 1383 DMS DMS . 
N 5 GOL C 1 1384 1384 GOL GOL . 
O 3 BBW E 1 1382 1382 BBW BBW . 
P 4 DMS E 1 1383 1383 DMS DMS . 
Q 7 HOH A 1 2001 2001 HOH HOH . 
Q 7 HOH A 2 2002 2002 HOH HOH . 
Q 7 HOH A 3 2003 2003 HOH HOH . 
Q 7 HOH A 4 2004 2004 HOH HOH . 
Q 7 HOH A 5 2005 2005 HOH HOH . 
Q 7 HOH A 6 2006 2006 HOH HOH . 
Q 7 HOH A 7 2007 2007 HOH HOH . 
Q 7 HOH A 8 2008 2008 HOH HOH . 
Q 7 HOH A 9 2009 2009 HOH HOH . 
Q 7 HOH A 10 2010 2010 HOH HOH . 
Q 7 HOH A 11 2011 2011 HOH HOH . 
Q 7 HOH A 12 2012 2012 HOH HOH . 
Q 7 HOH A 13 2013 2013 HOH HOH . 
Q 7 HOH A 14 2014 2014 HOH HOH . 
Q 7 HOH A 15 2015 2015 HOH HOH . 
Q 7 HOH A 16 2016 2016 HOH HOH . 
Q 7 HOH A 17 2017 2017 HOH HOH . 
Q 7 HOH A 18 2018 2018 HOH HOH . 
Q 7 HOH A 19 2019 2019 HOH HOH . 
Q 7 HOH A 20 2020 2020 HOH HOH . 
Q 7 HOH A 21 2021 2021 HOH HOH . 
Q 7 HOH A 22 2022 2022 HOH HOH . 
Q 7 HOH A 23 2023 2023 HOH HOH . 
Q 7 HOH A 24 2024 2024 HOH HOH . 
Q 7 HOH A 25 2025 2025 HOH HOH . 
Q 7 HOH A 26 2026 2026 HOH HOH . 
Q 7 HOH A 27 2027 2027 HOH HOH . 
Q 7 HOH A 28 2028 2028 HOH HOH . 
Q 7 HOH A 29 2029 2029 HOH HOH . 
Q 7 HOH A 30 2030 2030 HOH HOH . 
Q 7 HOH A 31 2031 2031 HOH HOH . 
Q 7 HOH A 32 2032 2032 HOH HOH . 
R 7 HOH B 1 2001 2001 HOH HOH . 
R 7 HOH B 2 2002 2002 HOH HOH . 
R 7 HOH B 3 2003 2003 HOH HOH . 
S 7 HOH C 1 2001 2001 HOH HOH . 
S 7 HOH C 2 2002 2002 HOH HOH . 
S 7 HOH C 3 2003 2003 HOH HOH . 
S 7 HOH C 4 2004 2004 HOH HOH . 
S 7 HOH C 5 2005 2005 HOH HOH . 
S 7 HOH C 6 2006 2006 HOH HOH . 
S 7 HOH C 7 2007 2007 HOH HOH . 
S 7 HOH C 8 2008 2008 HOH HOH . 
S 7 HOH C 9 2009 2009 HOH HOH . 
T 7 HOH D 1 2001 2001 HOH HOH . 
U 7 HOH E 1 2001 2001 HOH HOH . 
U 7 HOH E 2 2002 2002 HOH HOH . 
U 7 HOH E 3 2003 2003 HOH HOH . 
U 7 HOH E 4 2004 2004 HOH HOH . 
U 7 HOH E 5 2005 2005 HOH HOH . 
U 7 HOH E 6 2006 2006 HOH HOH . 
U 7 HOH E 7 2007 2007 HOH HOH . 
U 7 HOH E 8 2008 2008 HOH HOH . 
U 7 HOH E 9 2009 2009 HOH HOH . 
U 7 HOH E 10 2010 2010 HOH HOH . 
U 7 HOH E 11 2011 2011 HOH HOH . 
V 7 HOH F 1 2001 2001 HOH HOH . 
V 7 HOH F 2 2002 2002 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . H 4 391.76 4.859 157.11 1 89.68 ? S DMS 1383 A 1 
HETATM 2 O O DMS . . . H 4 391.066 5.177 158.371 1 89.11 ? O DMS 1383 A 1 
HETATM 3 C C1 DMS . . . H 4 390.47 4.959 155.902 1 89.37 ? C1 DMS 1383 A 1 
HETATM 4 C C2 DMS . . . H 4 392.069 3.108 157.115 1 87.86 ? C2 DMS 1383 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#