data_5AUL # _model_server_result.job_id HDJ9eAyYBME_nn7NH9CzZg _model_server_result.datetime_utc '2024-12-26 18:42:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5aul # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 5AUL # _exptl.entry_id 5AUL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AUL _cell.length_a 40.6 _cell.length_b 41.44 _cell.length_c 64.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AUL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 44 A GLY 655 1_555 A N CSO 45 A CSO 656 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C GLY 44 A GLY 655 1_555 A N CSO 45 A CSO 656 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.316 ? covale ? covale3 A C CSO 45 A CSO 656 1_555 A N TYR 46 A TYR 657 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 A C CSO 45 A CSO 656 1_555 A N TYR 46 A TYR 657 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.387 ? covale ? covale5 B C ASP 2 B ASP 190 1_555 B N PTR 3 B PTR 191 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.323 ? covale ? covale6 B C ASP 2 B ASP 190 1_555 B N PTR 3 B PTR 191 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.319 ? covale ? covale7 B C PTR 3 B PTR 191 1_555 B N MET 4 B MET 192 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 B C PTR 3 B PTR 191 1_555 B N MET 4 B MET 192 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 143 n n C1 C2 GOL sing 144 n n C1 H11 GOL sing 145 n n C1 H12 GOL sing 146 n n O1 HO1 GOL sing 147 n n C2 O2 GOL sing 148 n n C2 C3 GOL sing 149 n n C2 H2 GOL sing 150 n n O2 HO2 GOL sing 151 n n C3 O3 GOL sing 152 n n C3 H31 GOL sing 153 n n C3 H32 GOL sing 154 n n O3 HO3 GOL sing 155 n n # _atom_sites.entry_id 5AUL _atom_sites.fract_transf_matrix[1][1] 0.024631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 801 1 GOL GOL . D 4 HOH A 1 901 65 HOH HOH . D 4 HOH A 2 902 74 HOH HOH . D 4 HOH A 3 903 122 HOH HOH . D 4 HOH A 4 904 116 HOH HOH . D 4 HOH A 5 905 105 HOH HOH . D 4 HOH A 6 906 40 HOH HOH . D 4 HOH A 7 907 61 HOH HOH . D 4 HOH A 8 908 57 HOH HOH . D 4 HOH A 9 909 70 HOH HOH . D 4 HOH A 10 910 90 HOH HOH . D 4 HOH A 11 911 142 HOH HOH . D 4 HOH A 12 912 182 HOH HOH . D 4 HOH A 13 913 155 HOH HOH . D 4 HOH A 14 914 48 HOH HOH . D 4 HOH A 15 915 107 HOH HOH . D 4 HOH A 16 916 13 HOH HOH . D 4 HOH A 17 917 95 HOH HOH . D 4 HOH A 18 918 148 HOH HOH . D 4 HOH A 19 919 66 HOH HOH . D 4 HOH A 20 920 58 HOH HOH . D 4 HOH A 21 921 14 HOH HOH . D 4 HOH A 22 922 55 HOH HOH . D 4 HOH A 23 923 117 HOH HOH . D 4 HOH A 24 924 168 HOH HOH . D 4 HOH A 25 925 19 HOH HOH . D 4 HOH A 26 926 98 HOH HOH . D 4 HOH A 27 927 186 HOH HOH . D 4 HOH A 28 928 6 HOH HOH . D 4 HOH A 29 929 49 HOH HOH . D 4 HOH A 30 930 7 HOH HOH . D 4 HOH A 31 931 69 HOH HOH . D 4 HOH A 32 932 5 HOH HOH . D 4 HOH A 33 933 51 HOH HOH . D 4 HOH A 34 934 2 HOH HOH . D 4 HOH A 35 935 10 HOH HOH . D 4 HOH A 36 936 11 HOH HOH . D 4 HOH A 37 937 118 HOH HOH . D 4 HOH A 38 938 120 HOH HOH . D 4 HOH A 39 939 76 HOH HOH . D 4 HOH A 40 940 99 HOH HOH . D 4 HOH A 41 941 42 HOH HOH . D 4 HOH A 42 942 27 HOH HOH . D 4 HOH A 43 943 28 HOH HOH . D 4 HOH A 44 944 67 HOH HOH . D 4 HOH A 45 945 53 HOH HOH . D 4 HOH A 46 946 75 HOH HOH . D 4 HOH A 47 947 91 HOH HOH . D 4 HOH A 48 948 52 HOH HOH . D 4 HOH A 49 949 146 HOH HOH . D 4 HOH A 50 950 50 HOH HOH . D 4 HOH A 51 951 96 HOH HOH . D 4 HOH A 52 952 71 HOH HOH . D 4 HOH A 53 953 88 HOH HOH . D 4 HOH A 54 954 21 HOH HOH . D 4 HOH A 55 955 44 HOH HOH . D 4 HOH A 56 956 80 HOH HOH . D 4 HOH A 57 957 129 HOH HOH . D 4 HOH A 58 958 33 HOH HOH . D 4 HOH A 59 959 3 HOH HOH . D 4 HOH A 60 960 111 HOH HOH . D 4 HOH A 61 961 187 HOH HOH . D 4 HOH A 62 962 54 HOH HOH . D 4 HOH A 63 963 29 HOH HOH . D 4 HOH A 64 964 38 HOH HOH . D 4 HOH A 65 965 166 HOH HOH . D 4 HOH A 66 966 1 HOH HOH . D 4 HOH A 67 967 31 HOH HOH . D 4 HOH A 68 968 25 HOH HOH . D 4 HOH A 69 969 127 HOH HOH . D 4 HOH A 70 970 18 HOH HOH . D 4 HOH A 71 971 97 HOH HOH . D 4 HOH A 72 972 59 HOH HOH . D 4 HOH A 73 973 26 HOH HOH . D 4 HOH A 74 974 34 HOH HOH . D 4 HOH A 75 975 113 HOH HOH . D 4 HOH A 76 976 121 HOH HOH . D 4 HOH A 77 977 45 HOH HOH . D 4 HOH A 78 978 73 HOH HOH . D 4 HOH A 79 979 43 HOH HOH . D 4 HOH A 80 980 20 HOH HOH . D 4 HOH A 81 981 60 HOH HOH . D 4 HOH A 82 982 22 HOH HOH . D 4 HOH A 83 983 181 HOH HOH . D 4 HOH A 84 984 39 HOH HOH . D 4 HOH A 85 985 131 HOH HOH . D 4 HOH A 86 986 134 HOH HOH . D 4 HOH A 87 987 109 HOH HOH . D 4 HOH A 88 988 17 HOH HOH . D 4 HOH A 89 989 12 HOH HOH . D 4 HOH A 90 990 78 HOH HOH . D 4 HOH A 91 991 8 HOH HOH . D 4 HOH A 92 992 87 HOH HOH . D 4 HOH A 93 993 185 HOH HOH . D 4 HOH A 94 994 72 HOH HOH . D 4 HOH A 95 995 32 HOH HOH . D 4 HOH A 96 996 30 HOH HOH . D 4 HOH A 97 997 36 HOH HOH . D 4 HOH A 98 998 24 HOH HOH . D 4 HOH A 99 999 89 HOH HOH . D 4 HOH A 100 1000 15 HOH HOH . D 4 HOH A 101 1001 188 HOH HOH . D 4 HOH A 102 1002 179 HOH HOH . D 4 HOH A 103 1003 56 HOH HOH . D 4 HOH A 104 1004 123 HOH HOH . D 4 HOH A 105 1005 93 HOH HOH . D 4 HOH A 106 1006 135 HOH HOH . D 4 HOH A 107 1007 128 HOH HOH . D 4 HOH A 108 1008 46 HOH HOH . D 4 HOH A 109 1009 138 HOH HOH . D 4 HOH A 110 1010 161 HOH HOH . D 4 HOH A 111 1011 77 HOH HOH . D 4 HOH A 112 1012 62 HOH HOH . D 4 HOH A 113 1013 115 HOH HOH . D 4 HOH A 114 1014 103 HOH HOH . D 4 HOH A 115 1015 139 HOH HOH . D 4 HOH A 116 1016 184 HOH HOH . D 4 HOH A 117 1017 165 HOH HOH . D 4 HOH A 118 1018 100 HOH HOH . D 4 HOH A 119 1019 112 HOH HOH . D 4 HOH A 120 1020 132 HOH HOH . D 4 HOH A 121 1021 101 HOH HOH . D 4 HOH A 122 1022 119 HOH HOH . D 4 HOH A 123 1023 191 HOH HOH . D 4 HOH A 124 1024 173 HOH HOH . D 4 HOH A 125 1025 37 HOH HOH . D 4 HOH A 126 1026 172 HOH HOH . D 4 HOH A 127 1027 147 HOH HOH . D 4 HOH A 128 1028 92 HOH HOH . D 4 HOH A 129 1029 79 HOH HOH . D 4 HOH A 130 1030 183 HOH HOH . D 4 HOH A 131 1031 102 HOH HOH . D 4 HOH A 132 1032 151 HOH HOH . D 4 HOH A 133 1033 81 HOH HOH . D 4 HOH A 134 1034 83 HOH HOH . D 4 HOH A 135 1035 136 HOH HOH . D 4 HOH A 136 1036 104 HOH HOH . D 4 HOH A 137 1037 94 HOH HOH . D 4 HOH A 138 1038 133 HOH HOH . D 4 HOH A 139 1039 154 HOH HOH . D 4 HOH A 140 1040 143 HOH HOH . D 4 HOH A 141 1041 153 HOH HOH . D 4 HOH A 142 1042 108 HOH HOH . D 4 HOH A 143 1043 47 HOH HOH . D 4 HOH A 144 1044 144 HOH HOH . D 4 HOH A 145 1045 23 HOH HOH . D 4 HOH A 146 1046 150 HOH HOH . D 4 HOH A 147 1047 159 HOH HOH . D 4 HOH A 148 1048 41 HOH HOH . D 4 HOH A 149 1049 64 HOH HOH . D 4 HOH A 150 1050 84 HOH HOH . D 4 HOH A 151 1051 86 HOH HOH . D 4 HOH A 152 1052 193 HOH HOH . D 4 HOH A 153 1053 82 HOH HOH . D 4 HOH A 154 1054 169 HOH HOH . D 4 HOH A 155 1055 63 HOH HOH . D 4 HOH A 156 1056 125 HOH HOH . D 4 HOH A 157 1057 145 HOH HOH . D 4 HOH A 158 1058 167 HOH HOH . D 4 HOH A 159 1059 149 HOH HOH . D 4 HOH A 160 1060 152 HOH HOH . D 4 HOH A 161 1061 163 HOH HOH . D 4 HOH A 162 1062 126 HOH HOH . D 4 HOH A 163 1063 170 HOH HOH . D 4 HOH A 164 1064 114 HOH HOH . D 4 HOH A 165 1065 85 HOH HOH . D 4 HOH A 166 1066 106 HOH HOH . D 4 HOH A 167 1067 174 HOH HOH . D 4 HOH A 168 1068 110 HOH HOH . D 4 HOH A 169 1069 192 HOH HOH . D 4 HOH A 170 1070 194 HOH HOH . D 4 HOH A 171 1071 164 HOH HOH . E 4 HOH B 1 201 141 HOH HOH . E 4 HOH B 2 202 137 HOH HOH . E 4 HOH B 3 203 35 HOH HOH . E 4 HOH B 4 204 124 HOH HOH . E 4 HOH B 5 205 9 HOH HOH . E 4 HOH B 6 206 171 HOH HOH . E 4 HOH B 7 207 140 HOH HOH . E 4 HOH B 8 208 130 HOH HOH . E 4 HOH B 9 209 16 HOH HOH . E 4 HOH B 10 210 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -32.155 -5.463 -1.008 1 23.64 ? C1 GOL 801 A 1 HETATM 2 O O1 GOL . . . C 3 -32.997 -4.837 -0.047 1 23.08 ? O1 GOL 801 A 1 HETATM 3 C C2 GOL . . . C 3 -31.024 -4.551 -1.551 1 24.12 ? C2 GOL 801 A 1 HETATM 4 O O2 GOL . . . C 3 -31.54 -3.267 -1.825 1 28.57 ? O2 GOL 801 A 1 HETATM 5 C C3 GOL . . . C 3 -29.853 -4.41 -0.577 1 19.51 ? C3 GOL 801 A 1 HETATM 6 O O3 GOL . . . C 3 -28.889 -3.466 -1.011 1 13.73 ? O3 GOL 801 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #