data_5AUZ # _model_server_result.job_id 0odaSkrJ0NJHcDnybfiOKA _model_server_result.datetime_utc '2024-11-28 16:04:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5auz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 5AUZ # _exptl.entry_id 5AUZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GENISTEIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AUZ _cell.length_a 46.72 _cell.length_b 62.318 _cell.length_c 88.64 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O5' _chem_comp.formula_weight 270.237 _chem_comp.id GEN _chem_comp.mon_nstd_flag . _chem_comp.name GENISTEIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "5,7-DIHYDROXY-3-(4-HYDROXYPHENYL)-4H-1-BENZOPYRAN-4-ONE;4',5,7-TRIHYDROXYISOFLAVONE;PRUNETOL;GENISTEOL" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GEN doub 83 n y C1 C10 GEN sing 84 n y C1 H1 GEN sing 85 n n C2 O2 GEN sing 86 n n C2 C3 GEN sing 87 n y O2 H2 GEN sing 88 n n C3 C4 GEN doub 89 n y C3 H3 GEN sing 90 n n C4 O4 GEN sing 91 n n C4 C5 GEN sing 92 n y O4 H4 GEN sing 93 n n C5 C6 GEN sing 94 n y C5 C10 GEN doub 95 n y C6 O6 GEN doub 96 n n C6 C7 GEN sing 97 n y C7 C8 GEN doub 98 n y C7 C11 GEN sing 99 n y C8 O9 GEN sing 100 n y C8 H8 GEN sing 101 n n O9 C10 GEN sing 102 n y C11 C12 GEN doub 103 n y C11 C16 GEN sing 104 n y C12 C13 GEN sing 105 n y C12 H12 GEN sing 106 n n C13 C14 GEN doub 107 n y C13 H13 GEN sing 108 n n C14 O14 GEN sing 109 n n C14 C15 GEN sing 110 n y O14 H14 GEN sing 111 n n C15 C16 GEN doub 112 n y C15 H15 GEN sing 113 n n C16 H16 GEN sing 114 n n # _atom_sites.entry_id 5AUZ _atom_sites.fract_transf_matrix[1][1] 0.021404 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016047 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GEN A 1 400 400 GEN PDB . C 3 HOH A 1 501 125 HOH HOH . C 3 HOH A 2 502 93 HOH HOH . C 3 HOH A 3 503 158 HOH HOH . C 3 HOH A 4 504 17 HOH HOH . C 3 HOH A 5 505 142 HOH HOH . C 3 HOH A 6 506 224 HOH HOH . C 3 HOH A 7 507 147 HOH HOH . C 3 HOH A 8 508 204 HOH HOH . C 3 HOH A 9 509 157 HOH HOH . C 3 HOH A 10 510 78 HOH HOH . C 3 HOH A 11 511 144 HOH HOH . C 3 HOH A 12 512 145 HOH HOH . C 3 HOH A 13 513 135 HOH HOH . C 3 HOH A 14 514 151 HOH HOH . C 3 HOH A 15 515 148 HOH HOH . C 3 HOH A 16 516 127 HOH HOH . C 3 HOH A 17 517 117 HOH HOH . C 3 HOH A 18 518 177 HOH HOH . C 3 HOH A 19 519 82 HOH HOH . C 3 HOH A 20 520 207 HOH HOH . C 3 HOH A 21 521 71 HOH HOH . C 3 HOH A 22 522 231 HOH HOH . C 3 HOH A 23 523 185 HOH HOH . C 3 HOH A 24 524 11 HOH HOH . C 3 HOH A 25 525 104 HOH HOH . C 3 HOH A 26 526 139 HOH HOH . C 3 HOH A 27 527 163 HOH HOH . C 3 HOH A 28 528 114 HOH HOH . C 3 HOH A 29 529 38 HOH HOH . C 3 HOH A 30 530 211 HOH HOH . C 3 HOH A 31 531 161 HOH HOH . C 3 HOH A 32 532 175 HOH HOH . C 3 HOH A 33 533 179 HOH HOH . C 3 HOH A 34 534 228 HOH HOH . C 3 HOH A 35 535 64 HOH HOH . C 3 HOH A 36 536 96 HOH HOH . C 3 HOH A 37 537 80 HOH HOH . C 3 HOH A 38 538 199 HOH HOH . C 3 HOH A 39 539 192 HOH HOH . C 3 HOH A 40 540 128 HOH HOH . C 3 HOH A 41 541 245 HOH HOH . C 3 HOH A 42 542 32 HOH HOH . C 3 HOH A 43 543 159 HOH HOH . C 3 HOH A 44 544 75 HOH HOH . C 3 HOH A 45 545 8 HOH HOH . C 3 HOH A 46 546 54 HOH HOH . C 3 HOH A 47 547 149 HOH HOH . C 3 HOH A 48 548 166 HOH HOH . C 3 HOH A 49 549 217 HOH HOH . C 3 HOH A 50 550 18 HOH HOH . C 3 HOH A 51 551 113 HOH HOH . C 3 HOH A 52 552 222 HOH HOH . C 3 HOH A 53 553 52 HOH HOH . C 3 HOH A 54 554 27 HOH HOH . C 3 HOH A 55 555 48 HOH HOH . C 3 HOH A 56 556 107 HOH HOH . C 3 HOH A 57 557 123 HOH HOH . C 3 HOH A 58 558 61 HOH HOH . C 3 HOH A 59 559 196 HOH HOH . C 3 HOH A 60 560 94 HOH HOH . C 3 HOH A 61 561 42 HOH HOH . C 3 HOH A 62 562 13 HOH HOH . C 3 HOH A 63 563 190 HOH HOH . C 3 HOH A 64 564 105 HOH HOH . C 3 HOH A 65 565 12 HOH HOH . C 3 HOH A 66 566 47 HOH HOH . C 3 HOH A 67 567 21 HOH HOH . C 3 HOH A 68 568 24 HOH HOH . C 3 HOH A 69 569 15 HOH HOH . C 3 HOH A 70 570 66 HOH HOH . C 3 HOH A 71 571 143 HOH HOH . C 3 HOH A 72 572 46 HOH HOH . C 3 HOH A 73 573 36 HOH HOH . C 3 HOH A 74 574 37 HOH HOH . C 3 HOH A 75 575 5 HOH HOH . C 3 HOH A 76 576 111 HOH HOH . C 3 HOH A 77 577 198 HOH HOH . C 3 HOH A 78 578 83 HOH HOH . C 3 HOH A 79 579 132 HOH HOH . C 3 HOH A 80 580 55 HOH HOH . C 3 HOH A 81 581 220 HOH HOH . C 3 HOH A 82 582 95 HOH HOH . C 3 HOH A 83 583 244 HOH HOH . C 3 HOH A 84 584 100 HOH HOH . C 3 HOH A 85 585 98 HOH HOH . C 3 HOH A 86 586 1 HOH HOH . C 3 HOH A 87 587 45 HOH HOH . C 3 HOH A 88 588 56 HOH HOH . C 3 HOH A 89 589 116 HOH HOH . C 3 HOH A 90 590 20 HOH HOH . C 3 HOH A 91 591 25 HOH HOH . C 3 HOH A 92 592 173 HOH HOH . C 3 HOH A 93 593 184 HOH HOH . C 3 HOH A 94 594 232 HOH HOH . C 3 HOH A 95 595 26 HOH HOH . C 3 HOH A 96 596 23 HOH HOH . C 3 HOH A 97 597 209 HOH HOH . C 3 HOH A 98 598 76 HOH HOH . C 3 HOH A 99 599 50 HOH HOH . C 3 HOH A 100 600 191 HOH HOH . C 3 HOH A 101 601 19 HOH HOH . C 3 HOH A 102 602 124 HOH HOH . C 3 HOH A 103 603 67 HOH HOH . C 3 HOH A 104 604 240 HOH HOH . C 3 HOH A 105 605 193 HOH HOH . C 3 HOH A 106 606 130 HOH HOH . C 3 HOH A 107 607 34 HOH HOH . C 3 HOH A 108 608 4 HOH HOH . C 3 HOH A 109 609 77 HOH HOH . C 3 HOH A 110 610 126 HOH HOH . C 3 HOH A 111 611 119 HOH HOH . C 3 HOH A 112 612 53 HOH HOH . C 3 HOH A 113 613 39 HOH HOH . C 3 HOH A 114 614 10 HOH HOH . C 3 HOH A 115 615 131 HOH HOH . C 3 HOH A 116 616 60 HOH HOH . C 3 HOH A 117 617 69 HOH HOH . C 3 HOH A 118 618 182 HOH HOH . C 3 HOH A 119 619 6 HOH HOH . C 3 HOH A 120 620 99 HOH HOH . C 3 HOH A 121 621 150 HOH HOH . C 3 HOH A 122 622 202 HOH HOH . C 3 HOH A 123 623 16 HOH HOH . C 3 HOH A 124 624 33 HOH HOH . C 3 HOH A 125 625 171 HOH HOH . C 3 HOH A 126 626 152 HOH HOH . C 3 HOH A 127 627 129 HOH HOH . C 3 HOH A 128 628 2 HOH HOH . C 3 HOH A 129 629 186 HOH HOH . C 3 HOH A 130 630 237 HOH HOH . C 3 HOH A 131 631 251 HOH HOH . C 3 HOH A 132 632 22 HOH HOH . C 3 HOH A 133 633 85 HOH HOH . C 3 HOH A 134 634 169 HOH HOH . C 3 HOH A 135 635 51 HOH HOH . C 3 HOH A 136 636 89 HOH HOH . C 3 HOH A 137 637 109 HOH HOH . C 3 HOH A 138 638 168 HOH HOH . C 3 HOH A 139 639 31 HOH HOH . C 3 HOH A 140 640 90 HOH HOH . C 3 HOH A 141 641 68 HOH HOH . C 3 HOH A 142 642 79 HOH HOH . C 3 HOH A 143 643 81 HOH HOH . C 3 HOH A 144 644 243 HOH HOH . C 3 HOH A 145 645 247 HOH HOH . C 3 HOH A 146 646 218 HOH HOH . C 3 HOH A 147 647 141 HOH HOH . C 3 HOH A 148 648 167 HOH HOH . C 3 HOH A 149 649 229 HOH HOH . C 3 HOH A 150 650 122 HOH HOH . C 3 HOH A 151 651 30 HOH HOH . C 3 HOH A 152 652 72 HOH HOH . C 3 HOH A 153 653 164 HOH HOH . C 3 HOH A 154 654 84 HOH HOH . C 3 HOH A 155 655 49 HOH HOH . C 3 HOH A 156 656 7 HOH HOH . C 3 HOH A 157 657 234 HOH HOH . C 3 HOH A 158 658 120 HOH HOH . C 3 HOH A 159 659 70 HOH HOH . C 3 HOH A 160 660 3 HOH HOH . C 3 HOH A 161 661 43 HOH HOH . C 3 HOH A 162 662 103 HOH HOH . C 3 HOH A 163 663 146 HOH HOH . C 3 HOH A 164 664 63 HOH HOH . C 3 HOH A 165 665 183 HOH HOH . C 3 HOH A 166 666 118 HOH HOH . C 3 HOH A 167 667 216 HOH HOH . C 3 HOH A 168 668 170 HOH HOH . C 3 HOH A 169 669 223 HOH HOH . C 3 HOH A 170 670 57 HOH HOH . C 3 HOH A 171 671 62 HOH HOH . C 3 HOH A 172 672 91 HOH HOH . C 3 HOH A 173 673 213 HOH HOH . C 3 HOH A 174 674 35 HOH HOH . C 3 HOH A 175 675 208 HOH HOH . C 3 HOH A 176 676 238 HOH HOH . C 3 HOH A 177 677 227 HOH HOH . C 3 HOH A 178 678 112 HOH HOH . C 3 HOH A 179 679 86 HOH HOH . C 3 HOH A 180 680 92 HOH HOH . C 3 HOH A 181 681 74 HOH HOH . C 3 HOH A 182 682 97 HOH HOH . C 3 HOH A 183 683 40 HOH HOH . C 3 HOH A 184 684 110 HOH HOH . C 3 HOH A 185 685 73 HOH HOH . C 3 HOH A 186 686 87 HOH HOH . C 3 HOH A 187 687 41 HOH HOH . C 3 HOH A 188 688 59 HOH HOH . C 3 HOH A 189 689 44 HOH HOH . C 3 HOH A 190 690 241 HOH HOH . C 3 HOH A 191 691 115 HOH HOH . C 3 HOH A 192 692 206 HOH HOH . C 3 HOH A 193 693 187 HOH HOH . C 3 HOH A 194 694 106 HOH HOH . C 3 HOH A 195 695 102 HOH HOH . C 3 HOH A 196 696 88 HOH HOH . C 3 HOH A 197 697 205 HOH HOH . C 3 HOH A 198 698 221 HOH HOH . C 3 HOH A 199 699 249 HOH HOH . C 3 HOH A 200 700 230 HOH HOH . C 3 HOH A 201 701 29 HOH HOH . C 3 HOH A 202 702 28 HOH HOH . C 3 HOH A 203 703 242 HOH HOH . C 3 HOH A 204 704 138 HOH HOH . C 3 HOH A 205 705 156 HOH HOH . C 3 HOH A 206 706 178 HOH HOH . C 3 HOH A 207 707 162 HOH HOH . C 3 HOH A 208 708 225 HOH HOH . C 3 HOH A 209 709 200 HOH HOH . C 3 HOH A 210 710 215 HOH HOH . C 3 HOH A 211 711 137 HOH HOH . C 3 HOH A 212 712 172 HOH HOH . C 3 HOH A 213 713 121 HOH HOH . C 3 HOH A 214 714 181 HOH HOH . C 3 HOH A 215 715 14 HOH HOH . C 3 HOH A 216 716 153 HOH HOH . C 3 HOH A 217 717 188 HOH HOH . C 3 HOH A 218 718 154 HOH HOH . C 3 HOH A 219 719 140 HOH HOH . C 3 HOH A 220 720 203 HOH HOH . C 3 HOH A 221 721 155 HOH HOH . C 3 HOH A 222 722 101 HOH HOH . C 3 HOH A 223 723 214 HOH HOH . C 3 HOH A 224 724 194 HOH HOH . C 3 HOH A 225 725 65 HOH HOH . C 3 HOH A 226 726 134 HOH HOH . C 3 HOH A 227 727 176 HOH HOH . C 3 HOH A 228 728 160 HOH HOH . C 3 HOH A 229 729 189 HOH HOH . C 3 HOH A 230 730 136 HOH HOH . C 3 HOH A 231 731 108 HOH HOH . C 3 HOH A 232 732 165 HOH HOH . C 3 HOH A 233 733 195 HOH HOH . C 3 HOH A 234 734 58 HOH HOH . C 3 HOH A 235 735 248 HOH HOH . C 3 HOH A 236 736 210 HOH HOH . C 3 HOH A 237 737 250 HOH HOH . C 3 HOH A 238 738 201 HOH HOH . C 3 HOH A 239 739 236 HOH HOH . C 3 HOH A 240 740 9 HOH HOH . C 3 HOH A 241 741 219 HOH HOH . C 3 HOH A 242 742 133 HOH HOH . C 3 HOH A 243 743 235 HOH HOH . C 3 HOH A 244 744 212 HOH HOH . C 3 HOH A 245 745 197 HOH HOH . C 3 HOH A 246 746 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GEN . . . B 2 -21.171 -0.615 -12.361 1 29.13 ? C1 GEN 400 A 1 HETATM 2 C C2 GEN . . . B 2 -19.965 -0.997 -11.782 1 29.82 ? C2 GEN 400 A 1 HETATM 3 O O2 GEN . . . B 2 -19.332 -2.11 -12.244 1 37.38 ? O2 GEN 400 A 1 HETATM 4 C C3 GEN . . . B 2 -19.42 -0.251 -10.739 1 25.74 ? C3 GEN 400 A 1 HETATM 5 C C4 GEN . . . B 2 -20.1 0.879 -10.298 1 25.97 ? C4 GEN 400 A 1 HETATM 6 O O4 GEN . . . B 2 -19.627 1.662 -9.291 1 26.91 ? O4 GEN 400 A 1 HETATM 7 C C5 GEN . . . B 2 -21.303 1.286 -10.874 1 25.49 ? C5 GEN 400 A 1 HETATM 8 C C6 GEN . . . B 2 -21.944 2.415 -10.369 1 23.42 ? C6 GEN 400 A 1 HETATM 9 O O6 GEN . . . B 2 -21.438 3.038 -9.428 1 27.14 ? O6 GEN 400 A 1 HETATM 10 C C7 GEN . . . B 2 -23.167 2.769 -10.939 1 21.69 ? C7 GEN 400 A 1 HETATM 11 C C8 GEN . . . B 2 -23.661 1.986 -11.977 1 24.07 ? C8 GEN 400 A 1 HETATM 12 O O9 GEN . . . B 2 -23.026 0.893 -12.485 1 26.9 ? O9 GEN 400 A 1 HETATM 13 C C10 GEN . . . B 2 -21.841 0.519 -11.911 1 27.46 ? C10 GEN 400 A 1 HETATM 14 C C11 GEN . . . B 2 -24.006 3.802 -10.515 1 20.52 ? C11 GEN 400 A 1 HETATM 15 C C12 GEN . . . B 2 -24.078 4.205 -9.182 1 21.19 ? C12 GEN 400 A 1 HETATM 16 C C13 GEN . . . B 2 -24.977 5.196 -8.804 1 23.29 ? C13 GEN 400 A 1 HETATM 17 C C14 GEN . . . B 2 -25.816 5.768 -9.753 1 21.99 ? C14 GEN 400 A 1 HETATM 18 O O14 GEN . . . B 2 -26.686 6.739 -9.395 1 22.47 ? O14 GEN 400 A 1 HETATM 19 C C15 GEN . . . B 2 -25.757 5.361 -11.085 1 20.82 ? C15 GEN 400 A 1 HETATM 20 C C16 GEN . . . B 2 -24.867 4.361 -11.448 1 23.92 ? C16 GEN 400 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #